# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm04328.fasta.nr -Q ../query/mKIAA0765.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0765, 569 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7876455 sequences Expectation_n fit: rho(ln(x))= 7.0741+/-0.000216; mu= 3.9224+/- 0.012 mean_var=182.8511+/-35.108, 0's: 26 Z-trim: 146 B-trim: 182 in 2/63 Lambda= 0.094847 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|19070198|gb|AAL83754.1| SWAN [Mus musculus] (1003) 3794 531.9 3.5e-148 gi|30173327|sp|Q8R4X3.2|RBM12_MOUSE RecName: Full= (1002) 3788 531.1 6.2e-148 gi|148674224|gb|EDL06171.1| mCG5227, isoform CRA_a ( 773) 3782 530.1 9.1e-148 gi|74184867|dbj|BAE39056.1| unnamed protein produc ( 914) 3782 530.2 1e-147 gi|26348755|dbj|BAC38017.1| unnamed protein produc ( 992) 3782 530.2 1.1e-147 gi|26330362|dbj|BAC28911.1| unnamed protein produc ( 992) 3782 530.2 1.1e-147 gi|31324614|gb|AAP48569.1| swan [Rattus norvegicus (1032) 3742 524.8 4.9e-146 gi|194672612|ref|XP_001790603.1| PREDICTED: simila ( 931) 3666 514.3 6.2e-143 gi|30173387|sp|Q9NTZ6.1|RBM12_HUMAN RecName: Full= ( 932) 3664 514.1 7.5e-143 gi|50949507|emb|CAH10603.1| hypothetical protein [ ( 954) 3664 514.1 7.6e-143 gi|12053991|emb|CAC20441.1| RNA binding motif prot ( 932) 3661 513.7 1e-142 gi|194044523|ref|XP_001924336.1| PREDICTED: simila ( 933) 3661 513.7 1e-142 gi|166831595|gb|ABY90120.1| RNA binding motif prot (1460) 3661 513.9 1.3e-142 gi|194224364|ref|XP_001499378.2| PREDICTED: simila (1419) 3659 513.6 1.6e-142 gi|30173333|sp|Q8SQ27.1|RBM12_MACMU RecName: Full= ( 932) 3656 513.0 1.6e-142 gi|75070796|sp|Q5RBM8.1|RBM12_PONAB RecName: Full= ( 932) 3654 512.7 1.9e-142 gi|164623749|gb|ABY64675.1| RNA binding motif prot (1466) 3656 513.2 2.2e-142 gi|217038336|gb|ACJ76629.1| RNA binding motif prot ( 940) 3650 512.1 2.8e-142 gi|190402267|gb|ACE77677.1| RNA binding motif prot (1520) 3651 512.5 3.6e-142 gi|169731516|gb|ACA64888.1| RNA binding motif prot (1465) 3638 510.7 1.2e-141 gi|184185561|gb|ACC68959.1| RNA-binding protein 12 ( 946) 3619 507.9 5.4e-141 gi|211830818|gb|AAH26891.2| Rbm12 protein [Mus mus ( 887) 3618 507.7 5.7e-141 gi|197215644|gb|ACH53036.1| RNA binding motif prot (1475) 3618 508.0 8e-141 gi|26325168|dbj|BAC26338.1| unnamed protein produc ( 841) 3355 471.7 3.7e-130 gi|37932175|gb|AAP69823.1| SWAN ribonucleoprotein ( 887) 3307 465.2 3.7e-128 gi|194387896|dbj|BAG61361.1| unnamed protein produ ( 731) 2927 413.1 1.5e-112 gi|37932182|gb|AAP69824.1| SWAN ribonucleoprotein ( 877) 2451 348.0 6.7e-93 gi|37589430|gb|AAH59291.1| Rbm12-prov protein [Xen ( 877) 2448 347.6 8.9e-93 gi|21740240|emb|CAD39131.1| hypothetical protein [ ( 663) 2442 346.7 1.3e-92 gi|31324618|gb|AAP48571.1| swan [Danio rerio] ( 876) 2093 299.1 3.7e-78 gi|193786713|dbj|BAG52036.1| unnamed protein produ ( 568) 1819 261.4 5.4e-67 gi|31324616|gb|AAP48570.1| swan [Takifugu rubripes ( 889) 1617 233.9 1.5e-58 gi|220941557|emb|CAX15735.1| RNA binding motif pro ( 288) 1393 202.7 1.2e-49 gi|56203440|emb|CAI20134.1| RNA binding motif prot ( 291) 1359 198.1 3e-48 gi|47211266|emb|CAF91568.1| unnamed protein produc ( 823) 1267 186.0 3.8e-44 gi|159163272|pdb|1WEL|A Chain A, Solution Structur ( 124) 750 114.4 2.1e-23 gi|149755686|ref|XP_001488043.1| PREDICTED: RNA bi ( 976) 696 108.0 1.4e-20 gi|119612105|gb|EAW91699.1| RNA binding motif prot ( 707) 689 106.8 2.2e-20 gi|75071008|sp|Q5RFT7.1|RB12B_PONAB RecName: Full= ( 761) 689 106.9 2.3e-20 gi|215273872|sp|Q8IXT5.2|RB12B_HUMAN RecName: Full (1001) 689 107.0 2.8e-20 gi|73999587|ref|XP_544177.2| PREDICTED: similar to ( 814) 685 106.4 3.5e-20 gi|12851402|dbj|BAB29027.1| unnamed protein produc ( 723) 678 105.3 6.3e-20 gi|148673677|gb|EDL05624.1| mCG123728, isoform CRA ( 834) 678 105.4 6.9e-20 gi|187953621|gb|AAI37621.1| C430048L16Rik protein ( 834) 678 105.4 6.9e-20 gi|26348891|dbj|BAC38085.1| unnamed protein produc ( 834) 678 105.4 6.9e-20 gi|124020998|sp|Q80YR9.2|R12BA_MOUSE RecName: Full ( 836) 678 105.4 7e-20 gi|29747798|gb|AAH50844.1| RNA binding motif prote ( 836) 678 105.4 7e-20 gi|81910709|sp|Q66JV4.1|R12BB_MOUSE RecName: Full= ( 834) 674 104.9 1e-19 gi|62648675|ref|XP_232819.3| PREDICTED: similar to ( 843) 671 104.5 1.4e-19 gi|109476157|ref|XP_001054639.1| PREDICTED: simila ( 843) 671 104.5 1.4e-19 >>gi|19070198|gb|AAL83754.1| SWAN [Mus musculus] gi| (1003 aa) initn: 3794 init1: 3794 opt: 3794 Z-score: 2816.7 bits: 531.9 E(): 3.5e-148 Smith-Waterman score: 3794; 100.000% identity (100.000% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|190 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL ::::::::::::::::::::::::::::::::::::::::::::: gi|190 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|190 AGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMPG 660 670 680 690 700 710 >>gi|30173327|sp|Q8R4X3.2|RBM12_MOUSE RecName: Full=RNA- (1002 aa) initn: 3788 init1: 3788 opt: 3788 Z-score: 2812.3 bits: 531.1 E(): 6.2e-148 Smith-Waterman score: 3788; 99.820% identity (99.820% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|301 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 PAIVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL ::::::::::::::::::::::::::::::::::::::::::::: gi|301 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|301 AGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMPG 660 670 680 690 700 710 >>gi|148674224|gb|EDL06171.1| mCG5227, isoform CRA_a [Mu (773 aa) initn: 3782 init1: 3782 opt: 3782 Z-score: 2809.2 bits: 530.1 E(): 9.1e-148 Smith-Waterman score: 3782; 99.640% identity (99.820% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|148 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PAIVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|148 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL ::::::::::::::::::::::::::::::::::::::::::::: gi|148 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|148 AGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMPG 660 670 680 690 700 710 >>gi|74184867|dbj|BAE39056.1| unnamed protein product [M (914 aa) initn: 3782 init1: 3782 opt: 3782 Z-score: 2808.3 bits: 530.2 E(): 1e-147 Smith-Waterman score: 3782; 99.640% identity (99.820% similar) in 555 aa overlap (1-555:12-566) 10 20 30 40 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNLPATVPNFNNPSPSVVTATT :::::::::::::::::::::::::::::::: :::::::::::::::: gi|741 MQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLPAIVPNFNNPSPSVVTATT 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 SVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTASPMNTVPPPPIPPIPAMPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTASPMNTVPPPPIPPIPAMPS 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 LPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLPPMSGMPPLNPPPVAPLPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLPPMSGMPPLNPPPVAPLPAG 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 MNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPINPDDLYVSVHGMPFSAMEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPINPDDLYVSVHGMPFSAMEN 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 DVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPAT 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 ERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLP 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNR 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 FIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPFSITKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPFSITKM 430 440 450 460 470 480 470 480 490 500 510 520 mKIAA0 DVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHI :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|741 DVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKSEHLHRKKLNGREAFVHI 490 500 510 520 530 540 530 540 550 560 mKIAA0 VTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL :::::::::::::::::::::::::: gi|741 VTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPAAGIPTAGIPGAGLPSAGMP 550 560 570 580 590 600 >>gi|26348755|dbj|BAC38017.1| unnamed protein product [M (992 aa) initn: 3782 init1: 3782 opt: 3782 Z-score: 2807.9 bits: 530.2 E(): 1.1e-147 Smith-Waterman score: 3782; 99.640% identity (99.820% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|263 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PAIVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|263 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL ::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|263 AGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMPG 660 670 680 690 700 710 >>gi|26330362|dbj|BAC28911.1| unnamed protein product [M (992 aa) initn: 3782 init1: 3782 opt: 3782 Z-score: 2807.9 bits: 530.2 E(): 1.1e-147 Smith-Waterman score: 3782; 99.640% identity (99.820% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|263 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PAIVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|263 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL ::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|263 AGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMPS 660 670 680 690 700 710 >>gi|31324614|gb|AAP48569.1| swan [Rattus norvegicus] (1032 aa) initn: 3742 init1: 3742 opt: 3742 Z-score: 2778.1 bits: 524.8 E(): 4.9e-146 Smith-Waterman score: 3742; 98.198% identity (99.640% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|313 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :::::.::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|313 PATVPSFNNPSPSVVTATTSVHESNKSIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|313 SPMNTVPPPPIPPIPSMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI :.:::::::::::::::.:::::::::.::::.:::::::::::: :::::::::::::: gi|313 PISGMPPLNPPPVAPLPTGMNGSGAPISLNNNLNPVFLGPLNPVNPIQMNSQSSVKSLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|313 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMVLNPEGEV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|313 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL :::::::::::::::::::::::::::::::::::::::::: :: gi|313 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKIPVPGNPAVPVIPSAGMPA 600 610 620 630 640 650 gi|313 AGIPSAGIPSAGIPSAGMPSAGMPSAGLPAAGLPAAGLPGSGMPGSGMPGSGIPGPGIPG 660 670 680 690 700 710 >>gi|194672612|ref|XP_001790603.1| PREDICTED: similar to (931 aa) initn: 3666 init1: 3666 opt: 3666 Z-score: 2722.4 bits: 514.3 E(): 6.2e-143 Smith-Waterman score: 3666; 94.595% identity (99.279% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::.:::: gi|194 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSGRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :.::::::::::::::::::::::.::::::::::.:::::.::.::::::::::.:::: gi|194 PTTVPNFNNPSPSVVTATTSVHESSKNIQTFSTASIGTAPPNMGASFGSPTFSSTVPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP ::::::::::::::::::::::.::::::::::::::.::::::::::::::::::: :: gi|194 SPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTMPPVPPVPPIPPVPSVPPMTPLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI ::::::::::::::::::::::::::..::::.:::::::::::: .::::::::: ::: gi|194 PMSGMPPLNPPPVAPLPAGMNGSGAPVNLNNNLNPVFLGPLNPVNPVQMNSQSSVKPLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|194 NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR :::::::::::::::::::::::::::::::::::.:::::.::::: :::::::::::: gi|194 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSIGPSGQTHPPPQPLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :.:::::::::::::::::::::::::::::::::::::::::::::::::..:::::.: gi|194 NEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMILNPEGDV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH .:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. gi|194 TSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDAR 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL :::.::::::::::::::.::::::::::::::::::::::.::: gi|194 KSERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMSVPGNPAVPGIPNVGMPN 600 610 620 630 640 650 gi|194 AGLPSSGMPSAGLPNAGMPNAGIPAAGMPNAGMPAAGMPNAGIPRGEEHAFLAVGSKEAN 660 670 680 690 700 710 >>gi|30173387|sp|Q9NTZ6.1|RBM12_HUMAN RecName: Full=RNA- (932 aa) initn: 3664 init1: 3664 opt: 3664 Z-score: 2720.9 bits: 514.1 E(): 7.5e-143 Smith-Waterman score: 3664; 95.135% identity (99.099% similar) in 555 aa overlap (1-555:90-644) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|301 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :.:: ::::::::::::::::::::::::::::::::::::.::.::::::::::.:::: gi|301 PTTVSNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTA 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: :: gi|301 SPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI ::::::::::::::::::::::::::..::::.::.::::::::: :::::::::: ::: gi|301 PMSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPI 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|301 NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR ::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::::: gi|301 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKR 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 420 430 440 450 460 470 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :.:::::::::::::::::::::::::::::::::::::::::::::::::..:::::.: gi|301 NEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMILNPEGDV 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH .:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. gi|301 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDAR 540 550 560 570 580 590 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL :::.::::::::::::::.::::::::::::::::::::::. :: gi|301 KSERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGMPNAGLPG 600 610 620 630 640 650 gi|301 VGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGGEEHAFLTVGSKEANNGP 660 670 680 690 700 710 >>gi|50949507|emb|CAH10603.1| hypothetical protein [Homo (954 aa) initn: 3664 init1: 3664 opt: 3664 Z-score: 2720.8 bits: 514.1 E(): 7.6e-143 Smith-Waterman score: 3664; 95.135% identity (99.099% similar) in 555 aa overlap (1-555:112-666) 10 20 30 mKIAA0 FETANLDIPPANASRSGPPPSSGMSSRVNL :::::::::::::::::::::::::::::: gi|509 TGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNL 90 100 110 120 130 140 40 50 60 70 80 90 mKIAA0 PATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPSMGTSFGSPTFSSTIPSTA :.:: ::::::::::::::::::::::::::::::::::::.::.::::::::::.:::: gi|509 PTTVSNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTA 150 160 170 180 190 200 100 110 120 130 140 150 mKIAA0 SPMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTTLP ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: :: gi|509 SPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP 210 220 230 240 250 260 160 170 180 190 200 210 mKIAA0 PMSGMPPLNPPPVAPLPAGMNGSGAPIGLNNNMNPVFLGPLNPVNSIQMNSQSSVKSLPI ::::::::::::::::::::::::::..::::.::.::::::::: :::::::::: ::: gi|509 PMSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPI 270 280 290 300 310 320 220 230 240 250 260 270 mKIAA0 NPDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|509 NPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEA 330 340 350 360 370 380 280 290 300 310 320 330 mKIAA0 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKR ::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::::: gi|509 LKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSGQTHPPPQTLPRSKSPSGQKR 390 400 410 420 430 440 340 350 360 370 380 390 mKIAA0 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 SRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFR 450 460 470 480 490 500 400 410 420 430 440 450 mKIAA0 NDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQRELVLNPEGEV :.:::::::::::::::::::::::::::::::::::::::::::::::::..:::::.: gi|509 NEADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMILNPEGDV 510 520 530 540 550 560 460 470 480 490 500 510 mKIAA0 SSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAH .:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. gi|509 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDAR 570 580 590 600 610 620 520 530 540 550 560 mKIAA0 KSEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKISVPDGSLRDLGPALRVL :::.::::::::::::::.::::::::::::::::::::::. :: gi|509 KSERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGMPNAGLPG 630 640 650 660 670 680 gi|509 VGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGGEEHAFLTVGSKEANNGP 690 700 710 720 730 740 569 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 07:44:49 2009 done: Mon Mar 16 07:52:11 2009 Total Scan time: 984.920 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]