# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm04136.fasta.nr -Q ../query/mKIAA1083.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1083, 614 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7907591 sequences Expectation_n fit: rho(ln(x))= 6.6658+/-0.000203; mu= 6.6755+/- 0.011 mean_var=133.2929+/-25.789, 0's: 39 Z-trim: 115 B-trim: 0 in 0/66 Lambda= 0.111089 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|28279482|gb|AAH46286.1| Spastin [Mus musculus] ( 613) 3972 648.0 2.5e-183 gi|12230611|sp|Q9UBP0.1|SPAST_HUMAN RecName: Full= ( 616) 3655 597.2 5e-168 gi|194220831|ref|XP_001918126.1| PREDICTED: simila ( 616) 3628 592.9 1e-166 gi|73980099|ref|XP_850973.1| PREDICTED: similar to ( 624) 3612 590.3 6e-166 gi|124829112|gb|AAI33328.1| Spastin [Bos taurus] ( 614) 3591 586.9 6.1e-165 gi|148706482|gb|EDL38429.1| spastin, isoform CRA_b ( 556) 3584 585.8 1.2e-164 gi|12841566|dbj|BAB25259.1| unnamed protein produc ( 556) 3569 583.4 6.5e-164 gi|126303140|ref|XP_001371504.1| PREDICTED: simila ( 619) 3258 533.6 7.1e-149 gi|6273572|emb|CAB60143.1| spastin protein ortholo ( 504) 3220 527.4 4.2e-147 gi|33332017|gb|AAQ11224.1| spastin [Sus scrofa] ( 530) 3205 525.0 2.3e-146 gi|224047636|ref|XP_002192150.1| PREDICTED: spasti ( 612) 3182 521.4 3.3e-145 gi|53131842|emb|CAG31851.1| hypothetical protein [ ( 613) 3164 518.5 2.4e-144 gi|149412391|ref|XP_001509194.1| PREDICTED: hypoth ( 572) 3161 518.0 3.2e-144 gi|194400003|gb|ACF60960.1| neuronal spastin [Gall ( 613) 3156 517.2 5.9e-144 gi|116284104|gb|AAI23974.1| Spg4 protein [Xenopus ( 603) 2546 419.5 1.6e-114 gi|187469086|gb|AAI66846.1| Spast protein [Rattus ( 581) 2468 406.9 8.9e-111 gi|50603653|gb|AAH77358.1| Spg4-prov protein [Xeno ( 600) 2458 405.4 2.8e-110 gi|73980101|ref|XP_862831.1| PREDICTED: similar to ( 592) 2431 401.0 5.5e-109 gi|126303142|ref|XP_001371530.1| PREDICTED: simila ( 587) 2375 392.0 2.7e-106 gi|194400005|gb|ACF60961.1| neuronal spastin [Gall ( 489) 2255 372.7 1.5e-100 gi|224047638|ref|XP_002192184.1| PREDICTED: spasti ( 580) 2254 372.6 1.9e-100 gi|89272836|emb|CAJ82090.1| spastin [Xenopus tropi ( 571) 2003 332.4 2.4e-88 gi|45709942|gb|AAH67715.1| Spastin [Danio rerio] ( 570) 1853 308.4 4.1e-81 gi|34539797|gb|AAQ74774.1| spastin [Danio rerio] ( 570) 1842 306.6 1.4e-80 gi|149050667|gb|EDM02840.1| spastin (predicted) [R ( 299) 1812 301.6 2.4e-79 gi|189239513|ref|XP_975553.2| PREDICTED: similar t ( 690) 1711 285.7 3.3e-74 gi|215501771|gb|EEC11265.1| ATPase, putative [Ixod ( 648) 1456 244.8 6.4e-62 gi|110756940|ref|XP_393080.3| PREDICTED: similar t ( 682) 1452 244.2 1e-61 gi|210089060|gb|EEA37377.1| hypothetical protein B ( 431) 1446 243.0 1.4e-61 gi|157018233|gb|EAA07487.4| AGAP002334-PA [Anophel ( 573) 1409 237.2 1.1e-59 gi|212516427|gb|EEB18440.1| proteasome-activating ( 581) 1404 236.4 1.9e-59 gi|156551619|ref|XP_001600109.1| PREDICTED: simila ( 751) 1405 236.7 2.1e-59 gi|194166307|gb|EDW81208.1| GK11148 [Drosophila wi ( 777) 1384 233.3 2.2e-58 gi|194102405|gb|EDW24448.1| GL23394 [Drosophila pe ( 788) 1382 233.0 2.8e-58 gi|190626877|gb|EDV42401.1| GF17034 [Drosophila an ( 770) 1381 232.8 3e-58 gi|193915356|gb|EDW14223.1| GI24145 [Drosophila mo ( 765) 1379 232.5 3.8e-58 gi|193894195|gb|EDV93061.1| GH18484 [Drosophila gr ( 782) 1374 231.7 6.7e-58 gi|194152923|gb|EDW68357.1| GJ24660 [Drosophila vi ( 769) 1372 231.4 8.2e-58 gi|17862380|gb|AAL39667.1| LD23843p [Drosophila me ( 551) 1369 230.8 9e-58 gi|194185406|gb|EDW99017.1| GE23439 [Drosophila ya ( 758) 1371 231.2 9.1e-58 gi|25009667|gb|AAN71010.1| AT01057p [Drosophila me ( 758) 1369 230.9 1.1e-57 gi|190656695|gb|EDV53927.1| GG11247 [Drosophila er ( 758) 1369 230.9 1.1e-57 gi|28381443|gb|AAF56223.3| spastin, isoform A [Dro ( 758) 1369 230.9 1.1e-57 gi|194121376|gb|EDW43419.1| GM26551 [Drosophila se ( 758) 1369 230.9 1.1e-57 gi|54638539|gb|EAL27941.1| GA19274 [Drosophila pse ( 788) 1366 230.4 1.6e-57 gi|167875728|gb|EDS39111.1| spastin [Culex quinque ( 543) 1360 229.3 2.4e-57 gi|164430964|gb|ABY55754.1| spastin [Drosophila si ( 367) 1352 227.9 4.4e-57 gi|194200573|gb|EDX14149.1| GD21056 [Drosophila si ( 758) 1355 228.7 5.4e-57 gi|166007337|pdb|3B9P|A Chain A, Spastin ( 297) 1347 227.0 6.5e-57 gi|60465781|gb|EAL63857.1| AAA ATPase domain-conta ( 655) 1233 209.1 3.7e-51 >>gi|28279482|gb|AAH46286.1| Spastin [Mus musculus] (613 aa) initn: 3069 init1: 3069 opt: 3972 Z-score: 3447.5 bits: 648.0 E(): 2.5e-183 Smith-Waterman score: 3972; 99.837% identity (99.837% similar) in 614 aa overlap (1-614:1-613) 10 20 30 40 50 60 mKIAA1 MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFA 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA1 LLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFHKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFHKQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA1 AFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMM :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|282 AFEYISIALRIDEEEK-GQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMM 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 TNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLTHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLTHA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 SNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 SNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNKPS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 TPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPS 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 LRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 VRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLV 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 MGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 MGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTD 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 GYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLE 540 550 560 570 580 590 610 mKIAA1 AYIRWNKDFGDTTV :::::::::::::: gi|282 AYIRWNKDFGDTTV 600 610 >>gi|12230611|sp|Q9UBP0.1|SPAST_HUMAN RecName: Full=Spas (616 aa) initn: 3533 init1: 3533 opt: 3655 Z-score: 3172.9 bits: 597.2 E(): 5e-168 Smith-Waterman score: 3655; 92.695% identity (95.617% similar) in 616 aa overlap (1-614:1-616) 10 20 30 40 50 mKIAA1 MSSPAGRRKKKGSGGAS-PAPARPPPPAAVPAP-AAGPAPAAGSPPKRNPSSFSSPLVVG :.::.:: ::::::::: :.: ::::: .::: :::::: :: ::: :: :: :: gi|122 MNSPGGRGKKKGSGGASNPVPPRPPPPCLAPAPPAAGPAPPPESPHKRNLYYFSYPLFVG 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 FALLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFH ::::::.: ::::::.::::::::::::::::::.:::::: : ::: :::::: ::::: gi|122 FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSGAAPAPASASAPAPVPGGEAERVRVFH 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 KQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAK :::::::::::::::.:::::::::::::::::::::::::::::::::: ::::::::: gi|122 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLT :::::::::::::::::.:::: ::::::::::.::::.::::::::::::::::::::: gi|122 MMTNLVMAKDRLQLLEKMQPVLPFSKSQTDVYNDSTNLACRNGHLQSESGAVPKRKDPLT 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 HASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNK :.::::::::::.:.::::::::::::: ::::::::.. : ::: :::::::: ::::: gi|122 HTSNSLPRSKTVMKTGSAGLSGHHRAPSYSGLSMVSGVKQGSGPAPTTHKGTPKTNRTNK 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 PSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL :::::::.:::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|122 PSTPTTATRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVIL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA1 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA1 LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA1 TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT 550 560 570 580 590 600 600 610 mKIAA1 LEAYIRWNKDFGDTTV :::::::::::::::: gi|122 LEAYIRWNKDFGDTTV 610 >>gi|194220831|ref|XP_001918126.1| PREDICTED: similar to (616 aa) initn: 3519 init1: 3519 opt: 3628 Z-score: 3149.5 bits: 592.9 E(): 1e-166 Smith-Waterman score: 3628; 92.208% identity (95.617% similar) in 616 aa overlap (1-614:1-616) 10 20 30 40 50 mKIAA1 MSSPAGRRKKKGSGGAS-PAPARPPPPAAVPA-PAAGPAPAAGSPPKRNPSSFSSPLVVG :.::.:: ::::::::: :.: ::::: . : :: :::: :: ::: :: :: :: gi|194 MNSPGGRGKKKGSGGASSPVPPRPPPPCLAAARPAPRPAPAPESPHKRNLYYFSYPLFVG 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 FALLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFH ::::::.: ::::::.::::::::::::::::: ..::::: ::::: :::::: ::.:: gi|194 FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRATPAPASASPPAPVPGGEAERVRAFH 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 KQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAK :::::::::::::::.:::::::::::::::::::::::::::::::::: ::::::::: gi|194 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLT :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|194 MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 HASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNK :.::::::::::.:.::.:::::::::::::::::::.: :::::..:::.::: ::::: gi|194 HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPATATHKSTPKTNRTNK 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 PSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL :::::::.::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|194 PSTPTTAARKKKDLKNFRNVDSSLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA1 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA1 LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM :::::::::::::::::::: ::::::::::::::::::::: ::::::::::::::::: gi|194 LVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLGKQGSPLTQKELAQLARM 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA1 TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT 550 560 570 580 590 600 600 610 mKIAA1 LEAYIRWNKDFGDTTV :::::::::::::::: gi|194 LEAYIRWNKDFGDTTV 610 >>gi|73980099|ref|XP_850973.1| PREDICTED: similar to spa (624 aa) initn: 3556 init1: 3556 opt: 3612 Z-score: 3135.6 bits: 590.3 E(): 6e-166 Smith-Waterman score: 3649; 91.346% identity (94.712% similar) in 624 aa overlap (1-614:1-624) 10 20 30 40 50 mKIAA1 MSSPAGRRKKKGSGG---------ASPAPARPPPPAAVPA-PAAGPAPAAGSPPKRNPSS ::::.:: ::::::: .::.: ::::: .:: :: ::: :: ::: gi|739 MSSPGGRGKKKGSGGGGGSSGSSGSSPVPPRPPPPCLAPARPAPRPAPPPESPHKRNLYY 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 FSSPLVVGFALLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGE :: :: .:::::::.: ::::::.::::::::::::::::: .:::::: ::::: :::: gi|739 FSYPLFLGFALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGE 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 AESVRVFHKQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYE :: ::.::::::::::.::::::.:::::::::::::::::::::::::::::::::::: gi|739 AERVRAFHKQAFEYISVALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYE 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 RARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAV :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 RARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAV 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 PKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGT :::::::::.::::::::::.:.::.:::::::::::::::::::.: ::::.. :::.: gi|739 PKRKDPLTHTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPVTGTHKST 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 PKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQ :: ::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|739 PKTNRTNKPSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQ 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA1 SKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGV 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA1 QSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA1 ELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKI 550 560 570 580 590 600 600 610 mKIAA1 KRSVSPQTLEAYIRWNKDFGDTTV :::::::::::::::::::::::: gi|739 KRSVSPQTLEAYIRWNKDFGDTTV 610 620 >>gi|124829112|gb|AAI33328.1| Spastin [Bos taurus] g (614 aa) initn: 3242 init1: 3242 opt: 3591 Z-score: 3117.5 bits: 586.9 E(): 6.1e-165 Smith-Waterman score: 3591; 91.071% identity (94.805% similar) in 616 aa overlap (1-614:1-614) 10 20 30 40 50 mKIAA1 MSSPAGRRKKKGSGG-ASPAPARPPPPA-AVPAPAAGPAPAAGSPPKRNPSSFSSPLVVG :.::.:: ::::::: .::.: ::::: : :: ::: :: ::: :: :: .: gi|124 MNSPGGRGKKKGSGGPSSPVPPRPPPPCQARSRPAPKPAPPPQSPHKRNLYYFSYPLFLG 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 FALLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFH ::::::.: ::::::.::::::::::::::::::.::: :: :::: :::::: ::.:: gi|124 FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSGAAPASAS--PPAPVPGGEAERVRAFH 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 KQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAK ::::::::.::::::.::.:::.:::::::::::::::::::.::::::: ::::::::: gi|124 KQAFEYISVALRIDEDEKVGQKDQAVEWYKKGIEELEKGIAVVVTGQGEQCERARRLQAK 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLT :::::::::::::::::::: ::::::::::::.:::::::::::::::::::::::::: gi|124 MMTNLVMAKDRLQLLEKLQPSLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 HASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNK ::::::::::::.:.: .:::::::::::::::::::.: ::: ::.:::.::: ::::: gi|124 HASNSLPRSKTVMKTGPTGLSGHHRAPSCSGLSMVSGVRQGPGSAAATHKSTPKTNRTNK 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 PSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA1 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA1 LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|124 LVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA1 TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 TNGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT 540 550 560 570 580 590 600 610 mKIAA1 LEAYIRWNKDFGDTTV :::::::::::::::: gi|124 LEAYIRWNKDFGDTTV 600 610 >>gi|148706482|gb|EDL38429.1| spastin, isoform CRA_b [Mu (556 aa) initn: 3584 init1: 3584 opt: 3584 Z-score: 3112.0 bits: 585.8 E(): 1.2e-164 Smith-Waterman score: 3584; 100.000% identity (100.000% similar) in 556 aa overlap (59-614:1-556) 30 40 50 60 70 80 mKIAA1 VPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFALLRLLACHLGLLFAWLCQRFSRALMAAK :::::::::::::::::::::::::::::: gi|148 FALLRLLACHLGLLFAWLCQRFSRALMAAK 10 20 30 90 100 110 120 130 140 mKIAA1 RSSGTAPAPASPSPPAPGPGGEAESVRVFHKQAFEYISIALRIDEEEKAGQKEQAVEWYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSSGTAPAPASPSPPAPGPGGEAESVRVFHKQAFEYISIALRIDEEEKAGQKEQAVEWYK 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 KGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTD 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 VYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 GLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMN 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 EIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTM 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 REGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 REGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPN 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA1 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVK 460 470 480 490 500 510 570 580 590 600 610 mKIAA1 NMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV :::::::::::::::::::::::::::::::::::::::::::::: gi|148 NMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV 520 530 540 550 >>gi|12841566|dbj|BAB25259.1| unnamed protein product [M (556 aa) initn: 3069 init1: 3069 opt: 3569 Z-score: 3099.0 bits: 583.4 E(): 6.5e-164 Smith-Waterman score: 3569; 99.641% identity (99.641% similar) in 557 aa overlap (58-614:1-556) 30 40 50 60 70 80 mKIAA1 AVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFALLRLLACHLGLLFAWLCQRFSRALMAA :::::::::::::::::::::::::::::: gi|128 GFALLRLLACHLGLLFAWLCQRFSRALMAA 10 20 30 90 100 110 120 130 140 mKIAA1 KRSSGTAPAPASPSPPAPGPGGEAESVRVFHKQAFEYISIALRIDEEEKAGQKEQAVEWY :::::::::::::::: :::::::::::::::::::::::::::::::: :::::::::: gi|128 KRSSGTAPAPASPSPPEPGPGGEAESVRVFHKQAFEYISIALRIDEEEK-GQKEQAVEWY 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 KKGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KKGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQT 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 DVYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 DVYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSC 150 160 170 180 190 200 270 280 290 300 310 320 mKIAA1 SGLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 SGLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIM 210 220 230 240 250 260 330 340 350 360 370 380 mKIAA1 NEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKT 270 280 290 300 310 320 390 400 410 420 430 440 mKIAA1 MLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 MLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCE 330 340 350 360 370 380 450 460 470 480 490 500 mKIAA1 RREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 RREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLP 390 400 410 420 430 440 510 520 530 540 550 560 mKIAA1 NEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 NEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQV 450 460 470 480 490 500 570 580 590 600 610 mKIAA1 KNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV ::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV 510 520 530 540 550 >>gi|126303140|ref|XP_001371504.1| PREDICTED: similar to (619 aa) initn: 3258 init1: 3124 opt: 3258 Z-score: 2829.0 bits: 533.6 E(): 7.1e-149 Smith-Waterman score: 3461; 88.462% identity (92.788% similar) in 624 aa overlap (1-614:1-619) 10 20 30 40 50 60 mKIAA1 MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFA :.::.:: :::::: : ::: :::: : ::: :: :. :: ::: :: ::...:: gi|126 MNSPGGRGKKKGSGTA--APAGPPPPCAGPAP---PAAAGPSPHKRNLFYFSYPLLAAFA 10 20 30 40 50 70 80 90 100 110 mKIAA1 LLRLLACHLGLLFAWLCQRFSRALMAAKRSS--------GT-APAPASPSPPAPGP-GGE :::..: ::::::.::::::::::::::::. :. : : :: : : : : ::: gi|126 LLRFVAFHLGLLFVWLCQRFSRALMAAKRSTRAAATAATGSGAAAAASASAPPPVPAGGE 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 AESVRVFHKQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYE :: ::.::::::::::.::::::.::::::.::::::::::::::::::: :::::.::. gi|126 AERVRAFHKQAFEYISFALRIDEDEKAGQKDQAVEWYKKGIEELEKGIAVAVTGQGDQYD 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 RARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAV :::::::::::::::::::::::::::::::: ::::::::.:::::::::::::::::: gi|126 RARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFPKSQTDVYNDSTNLTCRNGHLQSESGAV 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 PKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGT ::.::::::.:::::::::: :. :.::::::::::::::::::.:: : ::.:.:::: gi|126 PKKKDPLTHTSNSLPRSKTVAKTTSTGLSGHHRAPSCSGLSMVSSARQGTVPATTSHKGT 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 PKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQ :: ::::::::: ::.:::::::::::::::::::::::::::::::::::::::::::: gi|126 PKTNRTNKPSTPMTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQ 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA1 SKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGV 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA1 QSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|126 QSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLSKQGSPLTQK 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA1 ELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKI :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ELAQLARMTEGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKI 540 550 560 570 580 590 600 610 mKIAA1 KRSVSPQTLEAYIRWNKDFGDTTV :::::::::::::::::::::::: gi|126 KRSVSPQTLEAYIRWNKDFGDTTV 600 610 >>gi|6273572|emb|CAB60143.1| spastin protein orthologue (504 aa) initn: 3220 init1: 3220 opt: 3220 Z-score: 2797.3 bits: 527.4 E(): 4.2e-147 Smith-Waterman score: 3220; 100.000% identity (100.000% similar) in 504 aa overlap (111-614:1-504) 90 100 110 120 130 140 mKIAA1 SRALMAAKRSSGTAPAPASPSPPAPGPGGEAESVRVFHKQAFEYISIALRIDEEEKAGQK :::::::::::::::::::::::::::::: gi|627 AESVRVFHKQAFEYISIALRIDEEEKAGQK 10 20 30 150 160 170 180 190 200 mKIAA1 EQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 EQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVL 40 50 60 70 80 90 210 220 230 240 250 260 mKIAA1 QFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 QFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSG 100 110 120 130 140 150 270 280 290 300 310 320 mKIAA1 HHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 HHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDS 160 170 180 190 200 210 330 340 350 360 370 380 mKIAA1 NLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 NLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFG 220 230 240 250 260 270 390 400 410 420 430 440 mKIAA1 PPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 PPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDE 280 290 300 310 320 330 450 460 470 480 490 500 mKIAA1 VDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 VDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIK 340 350 360 370 380 390 510 520 530 540 550 560 mKIAA1 RVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 RVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR 400 410 420 430 440 450 570 580 590 600 610 mKIAA1 ELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|627 ELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV 460 470 480 490 500 >>gi|33332017|gb|AAQ11224.1| spastin [Sus scrofa] gi (530 aa) initn: 3205 init1: 3205 opt: 3205 Z-score: 2784.0 bits: 525.0 E(): 2.3e-146 Smith-Waterman score: 3205; 93.962% identity (97.736% similar) in 530 aa overlap (85-614:1-530) 60 70 80 90 100 110 mKIAA1 LVVGFALLRLLACHLGLLFAWLCQRFSRALMAAKRSSGTAPAPASPSPPAPGPGGEAESV ::::::: .:::::: ::::: ::::.: : gi|333 MAAKRSSRAAPAPASASPPAPVPGGEVERV 10 20 30 120 130 140 150 160 170 mKIAA1 RVFHKQAFEYISIALRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARR :.::::::::::.::::::.::.:::::::::::::::::::::::.::::::: ::::: gi|333 RAFHKQAFEYISVALRIDEDEKVGQKEQAVEWYKKGIEELEKGIAVVVTGQGEQCERARR 40 50 60 70 80 90 180 190 200 210 220 230 mKIAA1 LQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNESTNLTCRNGHLQSESGAVPKRK :::::::::::::::::::::::::::::::: ::::.:::::::::::::::::::::: gi|333 LQAKMMTNLVMAKDRLQLLEKLQPVLQFSKSQMDVYNDSTNLTCRNGHLQSESGAVPKRK 100 110 120 130 140 150 240 250 260 270 280 290 mKIAA1 DPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPKPN ::::: ::::::::...:.::.:::::::::::::::.::: : ::::...:::.::: : gi|333 DPLTHPSNSLPRSKAIMKTGSTGLSGHHRAPSCSGLSIVSGMRQGPGPTTATHKSTPKTN 160 170 180 190 200 210 300 310 320 330 340 350 mKIAA1 RTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQE ::::::::::: ::::::::::::::::::.::::::::::::::::::::::::::::: gi|333 RTNKPSTPTTAPRKKKDLKNFRNVDSNLANFIMNEIVDNGTAVKFDDIAGQELAKQALQE 220 230 240 250 260 270 360 370 380 390 400 410 mKIAA1 IVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 IVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYV 280 290 300 310 320 330 420 430 440 450 460 470 mKIAA1 GEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAG ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|333 GEGEKLVRALFAVARELQPSIIFIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAG 340 350 360 370 380 390 480 490 500 510 520 530 mKIAA1 DDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 DDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQ 400 410 420 430 440 450 540 550 560 570 580 590 mKIAA1 LARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSV :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 LARLTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSV 460 470 480 490 500 510 600 610 mKIAA1 SPQTLEAYIRWNKDFGDTTV :::::::::::::::::::: gi|333 SPQTLEAYIRWNKDFGDTTV 520 530 614 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:34:05 2009 done: Thu Mar 12 14:41:43 2009 Total Scan time: 1017.180 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]