FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0966.ptfa, 1169 aa vs ./tmplib.26680 library 1767848 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.9995+/-0.00511; mu= 13.4526+/- 0.341 mean_var=134.2777+/-31.176, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.1107 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0851 ( 611 res) mbh00089 ( 611) 891 154 5.7e-38 mKIAA0910 ( 1584 res) mbg06264 (1584) 570 103 2.9e-22 mKIAA0348 ( 1299 res) mpm09073 (1299) 563 102 5.5e-22 mKIAA0274 ( 652 res) mnh11265 ( 652) 243 51 8.3e-07 >>mKIAA0851 ( 611 res) mbh00089 (611 aa) initn: 916 init1: 439 opt: 891 Z-score: 774.1 bits: 154.3 E(): 5.7e-38 Smith-Waterman score: 1004; 37.300% identity (40.447% ungapped) in 437 aa overlap (183-613:125-533) 160 170 180 190 200 210 mKIAA0 KPEKIIPSPDDSKFLLKTFTNIKSNVSAPNKKKVKESKEKEKLERRLLEELLKMFMDSES :: . . . . . . . .:. .. .. mKIAA0 YLVVITKKMKVGECFNHAVWRATDFDVLSYKKTMLHLTDIQLQDNKTFLAMLNHVLSMDG 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA0 FYYSLTYDLTNSVQRQS--TGERDGRPLWQKVDDRFFWNKYMIQALTEIGTPDVDFWIIP ::.: :::::...:: : . : . : ...:.:: :: .... :. . :.: . .: mKIAA0 FYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLLRELS--AQPEVHRFALP 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA0 IIQGFVQIEELVVNYNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRY ...::. .. .: . : :::::: :::.:: mKIAA0 VLHGFITMHSCSINGK-------------------------YFDWILISRRSCFRAGVRY 220 230 240 340 350 360 370 380 mKIAA0 KRRGVDKNGNVANYVETEQLIHVHHHTLSFIQTRGSVPVFWSQV-GYRYNPRPRLDKSEK ::.:..:..::.:::::..: . ::.:::::.:.:::: . .:.:.:...: . mKIAA0 YVRGIDSEGHAANFVETEQIVHYSGNRASFVQTRGSIPIFWSQRPNLKYKPHPQISKVAN 250 260 270 280 290 300 390 400 410 420 430 440 mKIAA0 ETVDCFCAHFEEQLKIYKKQVIVNLVDQAGREKIIGDAYLKQVLLFNNPKLTYVSFDFHE . .: : ::. :. :: ::::.:::.. : :: . ... ..: ... . :..::::. mKIAA0 H-MDGFQRHFDSQVIIYGKQVIINLVNHKGSEKPLEQTFANMVSSLGSGMIRYIAFDFHK 310 320 330 340 350 360 450 460 470 480 490 500 mKIAA0 HCRGMKFENVQTLTDAIHDIIIDMKWCWVDQAG-VICKQEGIFRVNCMDCLDRTNVVQAA .:..:... .. : : . .. .... ::.:: :. .:.:.:: :::::::::::.:. mKIAA0 ECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGKVVTNQDGVFRSNCMDCLDRTNVIQSL 370 380 390 400 410 420 510 520 530 540 550 560 mKIAA0 IARVVMEQQLKKLGVMPPEQPLPVK--CNRTYQIMWANNGDSISRQYAGTAALKGDFTRT .:: .. ::..:::. : : . ..::. ::.:... ..:::::.::: ::::: mKIAA0 LARRSLQAQLQRLGVLHVGQKLEEQDEFEKTYKNAWADNANACAKQYAGTGALKTDFTRT 430 440 450 460 470 480 570 580 590 600 610 620 mKIAA0 GERKLAGVMKDGVNSANRYYLSRFKDAYRQAVIDLMQGVPVTEDLYSIFTKEKEHEALHK :.: :.. :: :: ::: . :.:..:: :::. : ...: : mKIAA0 GKRTQLGLLMDGFNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFL 490 500 510 520 530 540 630 640 650 660 670 680 mKIAA0 ESQRSHQELISQLLQSYMQLLLPGDEKFHGGWALVDCDPSLTDAAHRDVEVLLLLSNAAY mKIAA0 ALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQ 550 560 570 580 590 600 >>mKIAA0910 ( 1584 res) mbg06264 (1584 aa) initn: 613 init1: 222 opt: 570 Z-score: 492.1 bits: 103.5 E(): 2.9e-22 Smith-Waterman score: 645; 28.037% identity (31.847% ungapped) in 535 aa overlap (196-715:123-608) 170 180 190 200 210 220 mKIAA0 FLLKTFTNIKSNVSAPNKKKVKESKEKEKLERRLLEELLKMFMDSESFYYS-----LTYD : :. : .. ..: .::.. .. : mKIAA0 GCMSVGKIQESEVFRVTSTEFISLRVDASDEDRISE--VRKVLNSGNFYFAWSASGVSLD 100 110 120 130 140 150 230 240 250 260 270 280 mKIAA0 LTNSVQRQSTGERDGRPLWQKVDDRFFWNKYMIQALTEIGTPDVDFWIIPIIQGFVQIEE :. ...: : : . .:.:::::. . : . :. . : :.. .. : :.:. mKIAA0 LSLNAHR-SMQE-------HTTDNRFFWNQSLHLHLKHYGV-NCDDWLLRLMCGGVEIRT 160 170 180 190 200 290 300 310 320 330 340 mKIAA0 LVVNYNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNGN . . .. : ..: :::: : .::: :.. ::.. .:. mKIAA0 IYAAHK--------------QAKAC-----------LISRLSCERAGTRFNVRGTNDDGH 210 220 230 350 360 370 380 390 mKIAA0 VANYVETEQLIHVHHHTLSFIQTRGSVPVFWSQVGYRYNP-RPRLDKSEKETVDCFCAHF :::.:::::.:.. . :::: :::::.:: : : . . : :.... . .. : :: mKIAA0 VANFVETEQVIYLDDCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHF 240 250 260 270 280 290 400 410 420 430 440 450 mKIAA0 EEQLKIYKKQVIVNLVDQAGREKIIGDAYLKQVLLFNNPK-LTYVSFDFHEHCRGMKFEN . .: ::..:::. . :.... :. ... .. . . .::::.:. .: : :. mKIAA0 RTLKDLYGKQIVVNLLGSKEGEHMLSKAFQSHLKASEHASDIHMVSFDYHQMVKGGKAEK 300 310 320 330 340 350 460 470 480 490 500 510 mKIAA0 VQTLTDAIHDIIIDMKWCWVDQAGVICKQEGIFRVNCMDCLDRTNVVQAAIARVVMEQQL .... . ..:. . . : . : : : :.::.::::::: ::: .. .. .:: mKIAA0 LHSILKPQVQKFLDYGFFYFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQL 360 370 380 390 400 410 520 530 540 550 560 570 mKIAA0 KKLGVMPPEQP-LPVKCNRTYQIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKD . ::. :.: : .. ..... ::. ::::::. ::::.::.: . :: :: mKIAA0 EALGLA--EKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEG------KAKL----KD 420 430 440 450 460 580 590 600 610 620 630 mKIAA0 GVNSANRYYLSRFKDAYRQAVID-LMQGVPVTEDLYS---IFTKEKEHEALHKESQRSHQ :. :..: . : :. .: .:: :. : .. :: . . .. .. : . . mKIAA0 GARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASS 470 480 490 500 510 520 640 650 660 670 680 690 mKIAA0 ELISQLLQSYMQLLLPGDEKFH-GGWALVDCDPSLTDAAHRDVEVLLLLSNAAYY--VAY ...... ..... : . : : :. .. . : .. . : .: . mKIAA0 KVLKNMCENFYKYSKPKKIRVCVGTWN-VNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQE 530 540 550 560 570 580 700 710 720 730 740 750 mKIAA0 YDDEVDKVNQYQRLGLEDLERIEIGPEPTLFGKPKFSCMRLHYRCKEAGGYFHTLRAVPR ..:. .: .. .:.:.. ... : mKIAA0 FQDKRSKPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQL 590 600 610 620 630 640 >>mKIAA0348 ( 1299 res) mpm09073 (1299 aa) initn: 557 init1: 216 opt: 563 Z-score: 487.1 bits: 102.2 E(): 5.5e-22 Smith-Waterman score: 563; 35.314% identity (38.628% ungapped) in 303 aa overlap (310-602:63-349) 280 290 300 310 320 330 mKIAA0 ELVVNYNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNG : . . :::: : .::: :. :::. .: mKIAA0 VPLRQHQVNCHNWLLKVICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDG 40 50 60 70 80 90 340 350 360 370 380 390 mKIAA0 NVANYVETEQLIHVHHHTLSFIQTRGSVPVFWSQVGYRYNPRP-RLDKSEKETVDCFCAH .:.:.::::: :.. . ::.: :::::.:: : : . . . :: .. . .. : : mKIAA0 HVSNFVETEQTIYMDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFERH 100 110 120 130 140 150 400 410 420 430 440 450 mKIAA0 FEEQLKIYKKQVIVNLVDQAGREKIIGDAYLKQVLLFNNPKLT-YVSFDFHEHCRGMKFE . . : :::.:::. . : :.... :. : . . : ...::::. .: :.: mKIAA0 MVLLKEQYGKQVVVNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGRKLE 160 170 180 190 200 210 460 470 480 490 500 mKIAA0 NVQTLTDAIHDIIIDMKWCWVDQAGVICK--------QEGIFRVNCMDCLDRTNVVQAAI ....: ... : : ::. : :.: .:.::.:::::::.:: : mKIAA0 KLENLLRP------QLQLHWED-FGVFAKGENVSPRFQKGTLRMNCLDCLDRTNTVQCFI 220 230 240 250 260 510 520 530 540 550 560 mKIAA0 ARVVMEQQLKKLGVMPPEQPLPVKCNRTYQIMWANNGDSISRQYAGTAALKGDFTRTGER : :.. ::..::. .:. . .... ::. :: :.:. ..:. ::.: . mKIAA0 ALEVLHLQLESLGLNS--KPIIDRFVESFKAMWSLNGHSLSKVFTGSRALEG-------K 270 280 290 300 310 570 580 590 600 610 620 mKIAA0 KLAGVMKDGVNSANRYYLSRFKDAYRQAVIDLMQGVPVTEDLYSIFTKEKEHEALHKESQ .: .:::. : .: : : :. .: .: :. mKIAA0 AKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLLLVGDVYNEESTDKGRMLLDNTALLATP 320 330 340 350 360 370 630 640 650 660 670 680 mKIAA0 RSHQELISQLLQSYMQLLLPGDEKFHGGWALVDCDPSLTDAAHRDVEVLLLLSNAAYYVA mKIAA0 RILKAMTERQSEFTNFKRIQIAVGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLSGAVDS 380 390 400 410 420 430 >>mKIAA0274 ( 652 res) mnh11265 (652 aa) initn: 469 init1: 131 opt: 243 Z-score: 214.5 bits: 50.8 E(): 8.3e-07 Smith-Waterman score: 448; 30.330% identity (35.192% ungapped) in 333 aa overlap (315-605:14-342) 290 300 310 320 330 340 mKIAA0 YNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNGNVANY :.::.::: . :: :. .::.. .:.::: mKIAA0 GQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANE 10 20 30 40 350 360 370 380 390 mKIAA0 VETEQLI---HVHHHTL----SFIQTRGSVPVFWSQVGYRYNPRPRLDKSEKETVDCFCA :::::.. : : :..:.:::::.:::: . :.: . .. . : mKIAA0 VETEQILCDASVMSFTAGSYSSYVQVRGSVPLFWSQDISTMMPKPPITLDQADPFAHVAA 50 60 70 80 90 100 400 410 420 430 440 mKIAA0 -HFEEQLKIYKKQVIV-NLV---DQAGREKIIGDAYLKQVLLFNN---PK--LTYVSFDF ::...:. . . .:. ::: .. .:.:... . : .:. :. ..:. .:. mKIAA0 LHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDM 110 120 130 140 150 160 450 460 470 480 mKIAA0 HEHCRGMKFENVQTLTDAIHDIIIDM---------KWC--------WVDQAGVICK---- .. .. :. :: ..: . .. ..: : . .: . mKIAA0 AKYTKS-KLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSILRPDEKWNELGGHVIPTGRL 170 180 190 200 210 220 490 500 510 520 530 540 mKIAA0 QEGIFRVNCMDCLDRTNVVQAAIARVVMEQQLKKLGVMP-PEQPLPVKCNRTYQIMWANN : ::.:.::.:::::::..: ... .. :: .::.. :. . . : .. .. .. mKIAA0 QTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDKPNLQFDTDAVRLFEELYEDH 230 240 250 260 270 280 550 560 570 580 590 600 mKIAA0 GDSISRQYAGTAALKGDFTRTGERKLAGVM---KDGVNSANRYYLSRFKDAYRQAVIDLM ::..: ::.:. .. : ::.: :: ... .::: . :.:: :: :.:. mKIAA0 GDTLSLQYGGSQLVHRVKTY---RKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLF 290 300 310 320 330 610 620 630 640 650 660 mKIAA0 QGVPVTEDLYSIFTKEKEHEALHKESQRSHQELISQLLQSYMQLLLPGDEKFHGGWALVD :: mKIAA0 LGVFHPTEGKPHLWELPTDFYLHHKNTMSLLPPRRSYTYWWTPEVVKHLPLPYDEVICAA 340 350 360 370 380 390 1169 residues in 1 query sequences 1767848 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:32:51 2006 done: Mon Mar 27 10:32:52 2006 Scan time: 1.070 Display time: 0.190 Function used was FASTA [version 3.4t11 Apr 17, 2002]