FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0797.ptfa, 1174 aa vs ./tmplib.26680 library 1767843 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.3927+/-0.00601; mu= 8.4057+/- 0.399 mean_var=216.6060+/-51.548, 0's: 0 Z-trim: 5 B-trim: 2 in 1/35 Lambda= 0.0871 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1707 ( 1051 res) mbh02904 (1051) 535 81 1.3e-15 >>mKIAA1707 ( 1051 res) mbh02904 (1051 aa) initn: 1200 init1: 503 opt: 535 Z-score: 372.9 bits: 80.8 E(): 1.3e-15 Smith-Waterman score: 957; 27.566% identity (36.061% ungapped) in 1023 aa overlap (156-1145:233-1047) 130 140 150 160 170 180 mKIAA0 GPGRRGAPLAEVEPEARHPAAATLPTRGPHSPPAPRRCRPWSKKEAAWKEEDGGGQERWQ : : : : :::: :::.. . mKIAA1 NLKSEQLSSSSDGSLESCQSVNHHKSFLSESGPKPSRTGDVPAKEAA-----CGGQKQGD 210 220 230 240 250 190 200 210 220 230 mKIAA0 RWGSFPERKEYPPYVHKAENSPVMLSHGQGGDHIMKKT-EESESYVESE-----IKRKVQ : :: : : :. ..: :.. . : ... :: :: ..:: . mKIAA1 DGGVTPEMAAPHP---KDFNTG-----NKGCDYLEEGTSNKNTSYSYSEMDHTPVSRK-R 260 270 280 290 300 240 250 260 270 280 290 mKIAA0 QKRHCSTYQLSPLSPASKKCLTHLEVSEQREYCPKCGKEKENQTKCQSCGIVFHNDLQRN .:: :... : : .: ... :. ::.::... . .: ... mKIAA1 KKRGRSNFHDSHNSKTS--------LDKPTEHT----KEEENDSSVSRKLEESGEDSHQD 310 320 330 340 350 300 310 320 330 340 350 mKIAA0 CRQAVTLNEPTGPLLRTSIHQNSGGQKSQNTGLTAKKFYGNSVDKIPIDILVTCDDSRHN : . :.... ..::. . .. ... ..: .: .. .. . :... mKIAA1 PAPPEGLAPESLESEATNLRSFAAGQEPDASAASGR---ASSPNK-SLESSASSEVSENS 360 370 380 390 400 410 360 370 380 390 400 410 mKIAA0 YIQTNGKVILPGGKIPKLTNPKERKISVSDLNDPIILSSDDDDDDDDRTKRRESTSPQPA . ..:... : . .: .. .: .::..:::.. . : . :: mKIAA1 SVAVKGEALTLKEASPPGGSSEESQLLIS--AEPIVVSSDEEGPVEH--KNSVILKLQPP 420 430 440 450 460 420 430 440 450 460 470 mKIAA0 DSACSSPVPSTGKVEAALNADACRAEQ-EPRSSPAEPELNTIVIPRKARMKDQLGNSIST : .. . :. ::.. : . : .:....: .. : . : : mKIAA1 HEIMSENQGTSDPQLSELTLGACESVQVTSELFPYNPDVENISCIKSNSEMDLKLDFIFT 470 480 490 500 510 520 480 490 500 510 520 530 mKIAA0 PLKRRKVNSHAAFIHPMSLSCQNFESVILNCRSIRVGTLFRLLVEPVIFSLESITIHLDG . :... .: .: . . :.. :.. .. . ..... .. : mKIAA1 CVYIGKIKGTPK-------GCVTFTK-----KYIKIP--FQVSTNEISLTVDTARLKRFG 530 540 550 560 570 540 550 560 570 580 590 mKIAA0 PESDPVDIILNTSDLTKCEWCNVRKLPVVFLQAIPAVYQKLSMQLQ---MSKEDKVWNDC . ...: . . :. ..:: : .. ::. .:...:. mKIAA1 --------LWESKDEDHSK----RSHAILFLWLSSDYLQDIQTQLENPMLSQQSKA---- 580 590 600 610 600 610 620 630 640 mKIAA0 KGINRITSLEEQYIILIFQTGLDHQAEVVFESIITDIGIRNN-------VPNFFAKILFD ...:.: ........ :. ...:. .:. .:. .: : ::. mKIAA1 ----------NEFIFLELNSSISQREELKLKDIMMEISTKNGNLHLSCPLPWVQALPLFQ 620 630 640 650 660 650 660 670 680 690 mKIAA0 EANSRLVACTRSYEESIKG--NCAQKENKVKTVSFESK-------IQLRSKQELQFFD-- . . . .. . : : .. . : . : :.:: :. . :: .. mKIAA1 DLSPQEISFLHYYYASASALPTAAGADMKKKSVSQPSNSDTIKPTYTFLHKQSSGCYSLS 670 680 690 700 710 720 700 710 720 730 740 750 mKIAA0 ----DDEEAGESHTIFIGPVEKLIVYPPPPAKGGISVTNEDLHCLSEGEFLNDVIIDFYL .:: : .. :::.:::::::::.:::..::::::.:: :::::::::::::: mKIAA1 ITSSPEEEWQEVRNT--GPVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYL 730 740 750 760 770 780 760 770 780 790 800 810 mKIAA0 KYLVLEKLKKEDADRIHIFSSFFYKRLNQRERR-NPDTTNLSIQQKRHGRVKTWTRHVDI :::.::: . : ..: ::::::::: :...: . :. .::. :.:: ::.:::::..: mKIAA1 KYLLLEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINI 790 800 810 820 830 840 820 830 840 850 860 870 mKIAA0 FEKDFIFVPLNEAAHWFLAVVCFPGLEKPKYEPNPHYHENAVMQKTPSAEDSCVSSASEM :.::.::::.::..::.:::.::: ::. :: : mKIAA1 FNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDCP------------------------- 850 860 870 880 880 890 900 910 920 930 mKIAA0 GACSQNSAAKPVIKKMLNRKHCLAVTDSSAAQEESEPCYRRNAYSVKCSMKKKNHAINEN mKIAA1 ------------------------------------------------------------ 940 950 960 970 980 990 mKIAA0 EEPSNGESTCQDICDRTQSENGLRDECFSSVHHPDALSKIRLNYGDQSADGGKLLEDELI : . .. : :.:: :. .. mKIAA1 ----------QTVSQQFQ--------------------------GQQSQHDHKMTDN--- 890 900 1000 1010 1020 1030 1040 1050 mKIAA0 DFSEDQDDPDDSSDDGLLADENYSSEIGQWHLKPTVCKQPCILLMDSLRGPSRSNVVKIL :: .: . :... :.:... . .::.::::..:::.. : .:.:. : mKIAA1 -------DPHTTSTVSTSAEDSQSTEVNM-SVPKKMCKRPCILILDSLKAASIQNTVQNL 910 920 930 940 950 1060 1070 1080 1090 1100 1110 mKIAA0 REYLEVEWEVKKGSKRSFSKDVMKGSNPKVPQQNNFSDCGVYVLQYVESFFENPVLNFEL :::::::::::. ..: ::: : ::::.:.: ::::::.::::::::..:..:::: mKIAA1 REYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFEL 960 970 980 990 1000 1010 1120 1130 1140 1150 1160 1170 mKIAA0 PMNLVNWFPPPRMKTKREEIRNIILKLQESQSKDKKLLKDSLAETSLGDGAEQYASASGG :..: .::: .:::::.::..::::. .:.: mKIAA1 PIHLEKWFPRHVIKTKREDIRELILKLHLQQQKGGSC 1020 1030 1040 1050 mKIAA0 SE 1174 residues in 1 query sequences 1767843 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:28:51 2006 done: Mon Mar 27 10:28:52 2006 Scan time: 1.100 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]