# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm03276.fasta.nr -Q ../query/mFLJ00183.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00183, 416 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7906856 sequences Expectation_n fit: rho(ln(x))= 5.6979+/-0.000198; mu= 9.0613+/- 0.011 mean_var=111.8276+/-21.009, 0's: 28 Z-trim: 80 B-trim: 0 in 0/66 Lambda= 0.121283 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|6665778|gb|AAF23011.1|AF211859_1 cyclin ania-6b ( 224) 1465 266.7 3.8e-69 gi|74199445|dbj|BAE41413.1| unnamed protein produc ( 224) 1461 266.0 6.2e-69 gi|56971367|gb|AAH88316.1| Cyclin L2 [Rattus norve ( 224) 1447 263.5 3.4e-68 gi|26325002|dbj|BAC26255.1| unnamed protein produc ( 218) 1427 260.0 3.8e-67 gi|81170401|sp|Q9JJA7.1|CCNL2_MOUSE RecName: Full= ( 518) 1430 260.9 4.8e-67 gi|124376018|gb|AAI32296.1| Cyclin L2 [Mus musculu ( 518) 1426 260.2 7.8e-67 gi|81170402|sp|Q5I0H5.2|CCNL2_RAT RecName: Full=Cy ( 520) 1412 257.8 4.3e-66 gi|149024832|gb|EDL81329.1| cyclin L2, isoform CRA ( 222) 1386 252.9 5.5e-65 gi|73956517|ref|XP_536710.2| PREDICTED: similar to ( 228) 1360 248.3 1.3e-63 gi|56205508|emb|CAI22659.1| cyclin L2 [Homo sapien ( 226) 1351 246.8 3.9e-63 gi|18676572|dbj|BAB84938.1| FLJ00183 protein [Homo ( 227) 1351 246.8 3.9e-63 gi|16740957|gb|AAH16333.1| Cyclin L2 [Homo sapiens ( 226) 1349 246.4 5e-63 gi|90078152|dbj|BAE88756.1| unnamed protein produc ( 226) 1346 245.9 7.2e-63 gi|21913163|gb|AAM76789.1| hypothetical protein SB ( 227) 1345 245.7 8.1e-63 gi|221554516|ref|NP_001138339.1| cyclin L2 isoform ( 236) 1339 244.7 1.7e-62 gi|108995540|ref|XP_001092985.1| PREDICTED: cyclin ( 237) 1332 243.5 4e-62 gi|114550552|ref|XP_001146359.1| PREDICTED: hypoth ( 521) 1326 242.8 1.4e-61 gi|73956515|ref|XP_848553.1| PREDICTED: similar to ( 523) 1325 242.6 1.6e-61 gi|114550550|ref|XP_001144972.1| PREDICTED: hypoth ( 711) 1326 242.9 1.8e-61 gi|114550548|ref|XP_514409.2| PREDICTED: hypotheti ( 731) 1326 242.9 1.8e-61 gi|74752124|sp|Q96S94.1|CCNL2_HUMAN RecName: Full= ( 520) 1316 241.0 4.8e-61 gi|194674137|ref|XP_001789600.1| PREDICTED: cyclin ( 520) 1314 240.7 6.2e-61 gi|108995528|ref|XP_001093311.1| PREDICTED: cyclin ( 520) 1311 240.1 8.9e-61 gi|21740177|emb|CAD39101.1| hypothetical protein [ ( 213) 1304 238.5 1.1e-60 gi|148683091|gb|EDL15038.1| mCG23353, isoform CRA_ ( 326) 1287 235.7 1.2e-59 gi|53236975|gb|AAH83055.1| Ccnl2 protein [Mus musc ( 193) 1275 233.4 3.5e-59 gi|211828758|gb|AAH03773.2| Ccnl2 protein [Mus mus ( 238) 1275 233.5 4.1e-59 gi|148683090|gb|EDL15037.1| mCG23353, isoform CRA_ ( 327) 1275 233.6 5.1e-59 gi|224079856|ref|XP_002194144.1| PREDICTED: cyclin ( 518) 1232 226.3 1.3e-56 gi|81170398|sp|Q5ZJP9.1|CCNL1_CHICK RecName: Full= ( 534) 1228 225.6 2.1e-56 gi|149024831|gb|EDL81328.1| cyclin L2, isoform CRA ( 198) 1205 221.1 1.7e-55 gi|149024834|gb|EDL81331.1| cyclin L2, isoform CRA ( 240) 1203 220.9 2.5e-55 gi|149024833|gb|EDL81330.1| cyclin L2, isoform CRA ( 518) 1203 221.2 4.3e-55 gi|84570037|gb|AAI10782.1| MGC131238 protein [Xeno ( 495) 1125 207.6 5.4e-51 gi|1276645|gb|AAC52504.1| Paneth cell enhanced exp ( 186) 1099 202.6 6.4e-50 gi|33150646|gb|AAP97201.1|AF087903_1 Paneth cell e ( 197) 1099 202.6 6.7e-50 gi|193787047|dbj|BAG51870.1| unnamed protein produ ( 298) 1099 202.8 8.9e-50 gi|119576620|gb|EAW56216.1| cyclin L2, isoform CRA ( 298) 1099 202.8 8.9e-50 gi|194373707|dbj|BAG56949.1| unnamed protein produ ( 319) 1099 202.8 9.3e-50 gi|211828926|gb|AAH71622.2| CCNL2 protein [Homo sa ( 326) 1099 202.8 9.4e-50 gi|108995531|ref|XP_001093538.1| PREDICTED: cyclin ( 298) 1097 202.4 1.1e-49 gi|194208161|ref|XP_001496372.2| PREDICTED: simila ( 402) 1096 202.4 1.6e-49 gi|73956513|ref|XP_856369.1| PREDICTED: similar to ( 299) 1092 201.6 2.1e-49 gi|81170403|sp|Q5BKF8.1|CCNL2_XENTR RecName: Full= ( 497) 1091 201.6 3.3e-49 gi|75775230|gb|AAI04533.1| Cyclin L2 [Bos taurus] ( 299) 1080 199.5 8.9e-49 gi|119576615|gb|EAW56211.1| cyclin L2, isoform CRA ( 269) 1077 198.9 1.2e-48 gi|12005730|gb|AAG44594.1|AF251294_1 hCLA-iso [Hom ( 348) 1077 199.0 1.4e-48 gi|119576618|gb|EAW56214.1| cyclin L2, isoform CRA ( 350) 1077 199.0 1.4e-48 gi|20385177|gb|AAM21204.1|AF367476_1 cyclin L beta ( 232) 1058 195.5 1.1e-47 gi|114590024|ref|XP_001151876.1| PREDICTED: cyclin ( 508) 1053 195.0 3.4e-47 >>gi|6665778|gb|AAF23011.1|AF211859_1 cyclin ania-6b [Mu (224 aa) initn: 1465 init1: 1465 opt: 1465 Z-score: 1397.6 bits: 266.7 E(): 3.8e-69 Smith-Waterman score: 1465; 100.000% identity (100.000% similar) in 224 aa overlap (3-226:1-224) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|666 MAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|666 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|666 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKGG :::::::::::::::::::::::::::::::::::::::::::::: gi|666 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGK 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 KPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRK >>gi|74199445|dbj|BAE41413.1| unnamed protein product [M (224 aa) initn: 1461 init1: 1461 opt: 1461 Z-score: 1393.9 bits: 266.0 E(): 6.2e-69 Smith-Waterman score: 1461; 99.554% identity (100.000% similar) in 224 aa overlap (3-226:1-224) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|741 MAAAAAGAAGLMAPAAAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKGG :::::::::::::::::::::::::::::::::::::::::::::: gi|741 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGK 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 KPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRK >>gi|56971367|gb|AAH88316.1| Cyclin L2 [Rattus norvegicu (224 aa) initn: 1447 init1: 1447 opt: 1447 Z-score: 1380.6 bits: 263.5 E(): 3.4e-68 Smith-Waterman score: 1447; 98.214% identity (99.554% similar) in 224 aa overlap (3-226:1-224) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR ::::::::.:::::: :::::::.:::::::::::::::::::::::::::::::::: gi|569 MAAAAAGASGLMAPALAACSSGSGGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|569 FTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|569 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKGG :::::::::::::::::::::::::::::::::::::::::::::: gi|569 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGK 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 KPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRK >>gi|26325002|dbj|BAC26255.1| unnamed protein product [M (218 aa) initn: 1427 init1: 1427 opt: 1427 Z-score: 1361.8 bits: 260.0 E(): 3.8e-67 Smith-Waterman score: 1427; 99.541% identity (100.000% similar) in 218 aa overlap (3-220:1-218) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EHVSMACVHLASRIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKGG :::::::::::::::::::::::::::::::::::::::: gi|263 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAW 180 190 200 210 250 260 270 280 290 300 mFLJ00 KPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRK >>gi|81170401|sp|Q9JJA7.1|CCNL2_MOUSE RecName: Full=Cycl (518 aa) initn: 2703 init1: 1430 opt: 1430 Z-score: 1360.0 bits: 260.9 E(): 4.8e-67 Smith-Waterman score: 2499; 79.344% identity (79.730% similar) in 518 aa overlap (3-416:1-518) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 MAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAW-------------------V :::::::::::::::::::::::::::::::::::::::: . gi|811 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLRTDVFVRFQPESI 180 190 200 210 220 230 mFLJ00 AS---------------------------------------------------------- : gi|811 ACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKILQLYTRKKVDLTHLESEVEK 240 250 260 270 280 290 230 240 250 mFLJ00 ------EGK---------------------PAPKLESPKEGKGGKPSPPSGKSAKRKMEG :.: :::::::::::::::::::::::::::::: gi|811 RKHAIEEAKARAKGLLPGTAPGLDSAAGFSPAPKLESPKEGKGGKPSPPSGKSAKRKMEG 300 310 320 330 340 350 260 270 280 290 300 310 mFLJ00 PKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 PKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRS 360 370 380 390 400 410 320 330 340 350 360 370 mFLJ00 RSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRSRSSSRSRSRSRERTDNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 RSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRSRSSSRSRSRSRERTDNS 420 430 440 450 460 470 380 390 400 410 mFLJ00 GKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR :::::::::::::::::::::::::::::::::::::::: gi|811 GKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR 480 490 500 510 >>gi|124376018|gb|AAI32296.1| Cyclin L2 [Mus musculus] (518 aa) initn: 2699 init1: 1426 opt: 1426 Z-score: 1356.2 bits: 260.2 E(): 7.8e-67 Smith-Waterman score: 2495; 79.151% identity (79.730% similar) in 518 aa overlap (3-416:1-518) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|124 MAAAAAGAAGLMAPAAAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAW-------------------V :::::::::::::::::::::::::::::::::::::::: . gi|124 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLRTDVFVRFQPESI 180 190 200 210 220 230 mFLJ00 AS---------------------------------------------------------- : gi|124 ACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKILQLYTRKKVDLTHLESEVEK 240 250 260 270 280 290 230 240 250 mFLJ00 ------EGK---------------------PAPKLESPKEGKGGKPSPPSGKSAKRKMEG :.: :::::::::::::::::::::::::::::: gi|124 RKHAIEEAKARAKGLLPGSAPGLDSAAGFSPAPKLESPKEGKGGKPSPPSGKSAKRKMEG 300 310 320 330 340 350 260 270 280 290 300 310 mFLJ00 PKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRS 360 370 380 390 400 410 320 330 340 350 360 370 mFLJ00 RSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRSRSSSRSRSRSRERTDNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRSRSSSRSRSRSRERTDNS 420 430 440 450 460 470 380 390 400 410 mFLJ00 GKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR :::::::::::::::::::::::::::::::::::::::: gi|124 GKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR 480 490 500 510 >>gi|81170402|sp|Q5I0H5.2|CCNL2_RAT RecName: Full=Cyclin (520 aa) initn: 2599 init1: 1412 opt: 1412 Z-score: 1343.0 bits: 257.8 E(): 4.3e-66 Smith-Waterman score: 2393; 76.154% identity (78.077% similar) in 520 aa overlap (3-416:1-520) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR ::::::::.:::::: :::::::.:::::::::::::::::::::::::::::::::: gi|811 MAAAAAGASGLMAPALAACSSGSGGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 FTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE 120 130 140 150 160 170 190 200 210 220 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAW-------------------- :::::::::::::::::::::::::::::::::::::::: gi|811 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWNYMNDSLRTDVFVRFQPESI 180 190 200 210 220 230 mFLJ00 ------------------------------------------------------------ gi|811 ACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKILQLYTRKKVDLTHLESEVEK 240 250 260 270 280 290 230 240 250 mFLJ00 -------------------------VASEG-KPAPKLESPKEGKGGKPSPPSGKSAKRKM :. : .:::: ::::::::.: :: : :.::::: gi|811 RKHAIEEAKARAKGLLPPGSAPGLDSATAGFSPAPKPESPKEGKGSKSSPLSVKNAKRKM 300 310 320 330 340 350 260 270 280 290 300 310 mFLJ00 EGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQS ::::::.: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|811 EGPKKAKGDSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQS 360 370 380 390 400 410 320 330 340 350 360 370 mFLJ00 RSRSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRSRSSSRSRSRSRERTD ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|811 RSRSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKHLTQKPHKSRSRSSSRSRSRSRERTD 420 430 440 450 460 470 380 390 400 410 mFLJ00 NSGKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR .::::::::::::::::::::::::::::::::::::::::: gi|811 SSGKYKKKSHYYRDQRRERSRSYERTGHRYERDHPGHSRHRR 480 490 500 510 520 >>gi|149024832|gb|EDL81329.1| cyclin L2, isoform CRA_b [ (222 aa) initn: 1389 init1: 1198 opt: 1386 Z-score: 1323.0 bits: 252.9 E(): 5.5e-65 Smith-Waterman score: 1386; 95.556% identity (97.333% similar) in 225 aa overlap (3-226:1-222) 10 20 30 40 50 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIG-DRLYSGVLITLENCLLPDDKL ::::::::.:::::: :::::::.::::::::::.: : : ::::::::::::::: gi|149 MAAAAAGASGLMAPALAACSSGSGGAAPGSQGVLMGGDAL---VLITLENCLLPDDKL 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 RFTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHS :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RFTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHS 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 MEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKA 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 ERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKG ::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGK 180 190 200 210 220 240 250 260 270 280 290 mFLJ00 GKPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRR >>gi|73956517|ref|XP_536710.2| PREDICTED: similar to cyc (228 aa) initn: 1360 init1: 1360 opt: 1360 Z-score: 1298.2 bits: 248.3 E(): 1.3e-63 Smith-Waterman score: 1360; 91.928% identity (97.758% similar) in 223 aa overlap (4-226:6-228) 10 20 30 40 50 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDK :..:::: : :::.:::. ::..:.::.::.::::::::::::::::::::::: gi|739 MAAAAATVAAGAPGPAAPAAAACTPGSGSAGPGAQGMLIGDRLYSGVLITLENCLLPDDK 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 LRFTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKH ::::::::::::.:::: :::::::::::::::::::::::::::::::::::::::::: gi|739 LRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKH 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 SMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIK :::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::: gi|739 SMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLLLDQDYVNLKNQIIK 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 AERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGK ::::::::::::::::::::::::::::::::::::::::.::::::: gi|739 AERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWVASEGK 190 200 210 220 240 250 260 270 280 290 mFLJ00 GGKPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKR >>gi|56205508|emb|CAI22659.1| cyclin L2 [Homo sapiens] (226 aa) initn: 1351 init1: 1351 opt: 1351 Z-score: 1289.8 bits: 246.8 E(): 3.9e-63 Smith-Waterman score: 1351; 92.825% identity (96.861% similar) in 223 aa overlap (4-226:4-226) 10 20 30 40 50 60 mFLJ00 HKMAAAAAGAAGLMAPASAACSSGSAGAAPGSQGVLIGDRLYSGVLITLENCLLPDDKLR ::::::::: :::.:: . ::.:: :::::::::::::::::::::::::::::: gi|562 MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLR 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 FTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM ::::::::::.:::: :::::::::::::::::::::::::::::::::::::::::::: gi|562 FTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAE ::::::::::::::::::::::::::::::::.::.:::::::.:::.:::::::::::: gi|562 EHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAE 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTAWVASEGKPAPKLESPKEGKGG ::::::::::::::::::::::::::::::::::::::.::::::: gi|562 RRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWVASEGK 190 200 210 220 250 260 270 280 290 300 mFLJ00 KPSPPSGKSAKRKMEGPKKAQGHSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRK 416 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 21:55:32 2009 done: Thu Mar 12 22:02:01 2009 Total Scan time: 882.470 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]