# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm01240.fasta.nr -Q ../query/mKIAA1992.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1992, 215 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920758 sequences Expectation_n fit: rho(ln(x))= 4.7849+/-0.000182; mu= 9.1945+/- 0.010 mean_var=61.6022+/-12.115, 0's: 34 Z-trim: 37 B-trim: 2750 in 1/67 Lambda= 0.163409 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74205492|dbj|BAE21052.1| unnamed protein produc ( 649) 1180 286.6 5.7e-75 gi|123792576|sp|Q0HA38.1|TT21B_MOUSE RecName: Full (1315) 1180 286.9 9.9e-75 gi|62645166|ref|XP_229983.3| PREDICTED: similar to (1315) 1163 282.8 1.6e-73 gi|194222272|ref|XP_001496187.2| PREDICTED: simila (1469) 1112 270.9 7.3e-70 gi|154425629|gb|AAI51354.1| TTC21B protein [Bos ta (1316) 1098 267.5 6.6e-69 gi|74004801|ref|XP_850862.1| PREDICTED: similar to (1358) 1097 267.3 7.9e-69 gi|109100002|ref|XP_001096248.1| PREDICTED: simila (1505) 1097 267.3 8.6e-69 gi|10432716|dbj|BAB13836.1| unnamed protein produc ( 254) 1088 264.7 9.3e-69 gi|62822201|gb|AAY14750.1| unknown [Homo sapiens] ( 254) 1087 264.4 1.1e-68 gi|34783528|gb|AAH35767.1| TTC21B protein [Homo sa ( 282) 1087 264.4 1.2e-68 gi|39795245|gb|AAH63579.1| TTC21B protein [Homo sa ( 475) 1087 264.6 1.8e-68 gi|193788400|dbj|BAG53294.1| unnamed protein produ ( 489) 1087 264.6 1.8e-68 gi|74762434|sp|Q7Z4L5.1|TT21B_HUMAN RecName: Full= (1316) 1087 264.9 4e-68 gi|116089292|ref|NP_079029.3| tetratricopeptide re (1316) 1087 264.9 4e-68 gi|158259345|dbj|BAF85631.1| unnamed protein produ (1316) 1087 264.9 4e-68 gi|126326492|ref|XP_001374860.1| PREDICTED: simila (1311) 1044 254.8 4.4e-65 gi|224054954|ref|XP_002194559.1| PREDICTED: simila (1316) 1021 249.4 1.9e-63 gi|118093679|ref|XP_422022.2| PREDICTED: similar t (1352) 1005 245.6 2.7e-62 gi|169146276|emb|CAQ13801.1| novel protein similar (1321) 988 241.6 4.2e-61 gi|210096933|gb|EEA45069.1| hypothetical protein B (1290) 939 230.0 1.2e-57 gi|210089590|gb|EEA37892.1| hypothetical protein B (1301) 939 230.0 1.3e-57 gi|115689616|ref|XP_793431.2| PREDICTED: similar t (1316) 911 223.4 1.2e-55 gi|156228718|gb|EDO49516.1| predicted protein [Nem (1305) 909 223.0 1.7e-55 gi|148677249|gb|EDL09196.1| tetratricopeptide repe (1282) 873 214.5 6e-53 gi|26325882|dbj|BAC26695.1| unnamed protein produc (1314) 873 214.5 6.1e-53 gi|150416165|sp|Q8C0S4.2|TT21A_MOUSE RecName: Full (1314) 873 214.5 6.1e-53 gi|12853191|dbj|BAB29674.1| unnamed protein produc (1314) 873 214.5 6.1e-53 gi|67626016|gb|AAY78492.1| tetratricopeptide repea (1314) 873 214.5 6.1e-53 gi|109485507|ref|XP_001078305.1| PREDICTED: simila (1314) 865 212.6 2.2e-52 gi|82236752|sp|Q6INC1.1|TT21B_XENLA RecName: Full= (1312) 858 210.9 7.1e-52 gi|194677199|ref|XP_612284.4| PREDICTED: similar t (1463) 847 208.4 4.6e-51 gi|21758558|dbj|BAC05323.1| unnamed protein produc ( 441) 822 202.1 1.1e-49 gi|198418731|ref|XP_002123838.1| PREDICTED: simila (1110) 826 203.3 1.2e-49 gi|15207913|dbj|BAB62981.1| hypothetical protein [ ( 724) 822 202.3 1.6e-49 gi|194379504|dbj|BAG63718.1| unnamed protein produ (1302) 823 202.7 2.1e-49 gi|21748475|emb|CAD31647.1| TRP domain containing (1320) 823 202.7 2.2e-49 gi|150416164|sp|Q8NDW8.2|TT21A_HUMAN RecName: Full (1320) 823 202.7 2.2e-49 gi|109041688|ref|XP_001083557.1| PREDICTED: simila (1313) 822 202.5 2.5e-49 gi|119584968|gb|EAW64564.1| tetratricopeptide repe (1320) 822 202.5 2.5e-49 gi|157502177|ref|NP_665698.2| tetratricopeptide re (1320) 822 202.5 2.5e-49 gi|157502179|ref|NP_001098983.1| tetratricopeptide (1321) 822 202.5 2.5e-49 gi|194379578|dbj|BAG63755.1| unnamed protein produ (1272) 820 202.0 3.4e-49 gi|10801652|dbj|BAB16743.1| hypothetical protein [ ( 582) 816 200.8 3.6e-49 gi|190587625|gb|EDV27667.1| hypothetical protein T (1315) 819 201.8 4.1e-49 gi|114586265|ref|XP_516376.2| PREDICTED: tetratric (1320) 819 201.8 4.2e-49 gi|21752149|dbj|BAC04129.1| unnamed protein produc ( 882) 814 200.4 6.9e-49 gi|148695062|gb|EDL27009.1| mCG129388 [Mus musculu (1245) 782 193.0 1.7e-46 gi|158282742|gb|EDP08494.1| flagellar associated p (1311) 772 190.7 8.9e-46 gi|156766595|gb|ABU95018.1| intraflagellar transpo (1355) 772 190.7 9.2e-46 gi|167872823|gb|EDS36206.1| tetratricopeptide repe (1325) 748 185.0 4.6e-44 >>gi|74205492|dbj|BAE21052.1| unnamed protein product [M (649 aa) initn: 1174 init1: 1174 opt: 1180 Z-score: 1502.2 bits: 286.6 E(): 5.7e-75 Smith-Waterman score: 1227; 85.965% identity (85.965% similar) in 228 aa overlap (20-215:422-649) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL------- ::::::::::::::::::::::: gi|742 ALYNMIEICLNPDNETIGGEVFENLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQG 400 410 420 430 440 450 50 60 70 mKIAA1 -------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARN ::::::::::::::::::::::::::::::::::: gi|742 RLQLRIMENCCLMATKQKSSVEQALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARN 460 470 480 490 500 510 80 90 100 110 120 130 mKIAA1 QLKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QLKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG 520 530 540 550 560 570 140 150 160 170 180 190 mKIAA1 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT 580 590 600 610 620 630 200 210 mKIAA1 YPKIRKDILDKARASLRP :::::::::::::::::: gi|742 YPKIRKDILDKARASLRP 640 >>gi|123792576|sp|Q0HA38.1|TT21B_MOUSE RecName: Full=Tet (1315 aa) initn: 1174 init1: 1174 opt: 1180 Z-score: 1497.9 bits: 286.9 E(): 9.9e-75 Smith-Waterman score: 1227; 85.965% identity (85.965% similar) in 228 aa overlap (20-215:1088-1315) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL------- ::::::::::::::::::::::: gi|123 ALYNMIEICLNPDNETIGGEVFENLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQG 1060 1070 1080 1090 1100 1110 50 60 70 mKIAA1 -------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARN ::::::::::::::::::::::::::::::::::: gi|123 RLQLRIMENCCLMATKQKSSVEQALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARN 1120 1130 1140 1150 1160 1170 80 90 100 110 120 130 mKIAA1 QLKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QLKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG 1180 1190 1200 1210 1220 1230 140 150 160 170 180 190 mKIAA1 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT 1240 1250 1260 1270 1280 1290 200 210 mKIAA1 YPKIRKDILDKARASLRP :::::::::::::::::: gi|123 YPKIRKDILDKARASLRP 1300 1310 >>gi|62645166|ref|XP_229983.3| PREDICTED: similar to tet (1315 aa) initn: 1157 init1: 1157 opt: 1163 Z-score: 1476.3 bits: 282.8 E(): 1.6e-73 Smith-Waterman score: 1210; 85.088% identity (85.526% similar) in 228 aa overlap (20-215:1088-1315) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL------- ::::::::::::::::::::::: gi|626 ALYNMIEICLNPDNETIGGEVFENLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQG 1060 1070 1080 1090 1100 1110 50 60 70 mKIAA1 -------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARN ::::::::::::::::::::::::::::::::::: gi|626 RLQLRIMENCCLMATKQKSSVEQALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARN 1120 1130 1140 1150 1160 1170 80 90 100 110 120 130 mKIAA1 QLKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG :::::::: :::::::.::::::::::::::::::::::::::::::::::::::::::: gi|626 QLKRIAKMTWNPIEAEELEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMG 1180 1190 1200 1210 1220 1230 140 150 160 170 180 190 mKIAA1 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 YIMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPT 1240 1250 1260 1270 1280 1290 200 210 mKIAA1 YPKIRKDILDKARASLRP :::::::::::::::::: gi|626 YPKIRKDILDKARASLRP 1300 1310 >>gi|194222272|ref|XP_001496187.2| PREDICTED: similar to (1469 aa) initn: 1106 init1: 1106 opt: 1112 Z-score: 1410.6 bits: 270.9 E(): 7.3e-70 Smith-Waterman score: 1143; 80.617% identity (84.141% similar) in 227 aa overlap (21-215:1243-1469) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL-------- : :::::::::::::::::::: gi|194 LYNMIEICLNPDNETIGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVEGH 1220 1230 1240 1250 1260 1270 50 60 70 mKIAA1 ------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQ :::::.:.:::::::::::::::::::::::.:::: gi|194 VQLRIMENYCLMATKQKSNVEQALNTFTEVATSEKDHIPALLGMATAYMILKQTPRARNQ 1280 1290 1300 1310 1320 1330 80 90 100 110 120 130 mKIAA1 LKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGY ::::::: :: ..:::.:::::::::::::::::::::::::::: :::::::::::::: gi|194 LKRIAKMNWNAVDAEDFEKSWLLLADIYIQSAKYDMAEELLKRCLRHNRSCCKAYEYMGY 1340 1350 1360 1370 1380 1390 140 150 160 170 180 190 mKIAA1 IMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|194 IMEKEQAYTDAAFNYEMAWKHGNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY 1400 1410 1420 1430 1440 1450 200 210 mKIAA1 PKIRKDILDKARASLRP ::::::::::::.:::: gi|194 PKIRKDILDKARTSLRP 1460 >>gi|154425629|gb|AAI51354.1| TTC21B protein [Bos taurus (1316 aa) initn: 1115 init1: 1092 opt: 1098 Z-score: 1393.5 bits: 267.5 E(): 6.6e-69 Smith-Waterman score: 1129; 78.855% identity (84.141% similar) in 227 aa overlap (21-215:1090-1316) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL-------- : :::::::::::::::::::: gi|154 LYNMIEICLNPDNETVGGEVFENLDADLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGQ 1060 1070 1080 1090 1100 1110 50 60 70 mKIAA1 ------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQ :::::::::::::.:::::::::.:::::::.:::: gi|154 VQLRIMENYCLMATKQKSNVEQALNTFTEIAASEKDHVPALLGMATAHMILKQTPRARNQ 1120 1130 1140 1150 1160 1170 80 90 100 110 120 130 mKIAA1 LKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGY ::::::: ::::.:::.:.:::::::::::::::::::::.:::: :::::::::::::: gi|154 LKRIAKMNWNPIDAEDFERSWLLLADIYIQSAKYDMAEELIKRCLRHNRSCCKAYEYMGY 1180 1190 1200 1210 1220 1230 140 150 160 170 180 190 mKIAA1 IMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY :::::::: :::.:::.::::.::::::::::::::::::::::::::.::::::::::: gi|154 IMEKEQAYMDAALNYEIAWKHGNQTNPAVGYKLAFNYLKAKRYVDAIDICHQVLEAHPTY 1240 1250 1260 1270 1280 1290 200 210 mKIAA1 PKIRKDILDKARASLRP ::::::::::::.:::: gi|154 PKIRKDILDKARTSLRP 1300 1310 >>gi|74004801|ref|XP_850862.1| PREDICTED: similar to tet (1358 aa) initn: 1093 init1: 1093 opt: 1097 Z-score: 1392.0 bits: 267.3 E(): 7.9e-69 Smith-Waterman score: 1130; 78.855% identity (84.581% similar) in 227 aa overlap (21-215:1132-1358) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL-------- : :::::::::::::::::::: gi|740 LYNMIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTIQGH 1110 1120 1130 1140 1150 1160 50 60 70 mKIAA1 ------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQ :::::::.:::::.::.::.::::.::::::.:::: gi|740 VQLRIMENYCLVATKQKSNVEQALNTFTEIASSEKDHVPAILGIATAYVILKQTPRARNQ 1170 1180 1190 1200 1210 1220 80 90 100 110 120 130 mKIAA1 LKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGY ::::::: ::::.:::.::.::::::::::::::::::::::::: ::.::::::::::: gi|740 LKRIAKMNWNPIDAEDFEKGWLLLADIYIQSAKYDMAEELLKRCLRHNKSCCKAYEYMGY 1230 1240 1250 1260 1270 1280 140 150 160 170 180 190 mKIAA1 IMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY ::::::::::::.:::::::::::::::::::::::::::::::::::.::::::::::: gi|740 IMEKEQAYTDAALNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDICHQVLEAHPTY 1290 1300 1310 1320 1330 1340 200 210 mKIAA1 PKIRKDILDKARASLRP ::::::::::::.:::: gi|740 PKIRKDILDKARTSLRP 1350 >>gi|109100002|ref|XP_001096248.1| PREDICTED: similar to (1505 aa) initn: 1091 init1: 1091 opt: 1097 Z-score: 1391.4 bits: 267.3 E(): 8.6e-69 Smith-Waterman score: 1128; 80.176% identity (84.141% similar) in 227 aa overlap (21-215:1279-1505) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL-------- : :::::::::::::::::::: gi|109 LYNMIEICLNPDNETIGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGH 1250 1260 1270 1280 1290 1300 50 60 70 mKIAA1 ------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQ :::::::::::::::::::::::::::::::.:::: gi|109 VQLRIMENYCLMATKQKSNVEQALNTFTEIAASEKDHIPALLGMATAYMILKQTPRARNQ 1310 1320 1330 1340 1350 1360 80 90 100 110 120 130 mKIAA1 LKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGY ::::::: :: :.::..:::::::::::::::::::::::::::: :::::::::::::: gi|109 LKRIAKMNWNAIDAEEFEKSWLLLADIYIQSAKYDMAEELLKRCLRHNRSCCKAYEYMGY 1370 1380 1390 1400 1410 1420 140 150 160 170 180 190 mKIAA1 IMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY ::::::::::::.:::::::.::.:::::::::::::::::::::.::.::::::::::: gi|109 IMEKEQAYTDAALNYEMAWKYSNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTY 1430 1440 1450 1460 1470 1480 200 210 mKIAA1 PKIRKDILDKARASLRP ::::::::::::::::: gi|109 PKIRKDILDKARASLRP 1490 1500 >>gi|10432716|dbj|BAB13836.1| unnamed protein product [H (254 aa) initn: 1082 init1: 1082 opt: 1088 Z-score: 1390.7 bits: 264.7 E(): 9.3e-69 Smith-Waterman score: 1119; 79.295% identity (84.141% similar) in 227 aa overlap (21-215:28-254) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL----------- : :::::::::::::::::::: gi|104 MIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGHVQL 10 20 30 40 50 60 50 60 70 80 mKIAA1 ---------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQLKR :::::::::::.:::::::::::::::::::.::::::: gi|104 RIMENYCLMATKQKSNVEQALNTFTEIAASEKEHIPALLGMATAYMILKQTPRARNQLKR 70 80 90 100 110 120 90 100 110 120 130 140 mKIAA1 IAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGYIME :::: :: :.::..:::::::::::::::::::::.:::::: ::::::::::::::::: gi|104 IAKMDWNAIDAEEFEKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSCCKAYEYMGYIME 130 140 150 160 170 180 150 160 170 180 190 200 mKIAA1 KEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTYPKI :::::::::.:::::::.::.:::::::::::::::::::::.::.:::::::::::::: gi|104 KEQAYTDAALNYEMAWKYSNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTYPKI 190 200 210 220 230 240 210 mKIAA1 RKDILDKARASLRP :::::::::::::: gi|104 RKDILDKARASLRP 250 >>gi|62822201|gb|AAY14750.1| unknown [Homo sapiens] (254 aa) initn: 1081 init1: 1081 opt: 1087 Z-score: 1389.5 bits: 264.4 E(): 1.1e-68 Smith-Waterman score: 1118; 79.295% identity (84.141% similar) in 227 aa overlap (21-215:28-254) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL----------- : :::::::::::::::::::: gi|628 MIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGHVQL 10 20 30 40 50 60 50 60 70 80 mKIAA1 ---------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQLKR :::::::::::.:::::::::::::::::::.::::::: gi|628 RIMENYCLMATKQKSNVEQALNTFTEIAASEKEHIPALLGMATAYMILKQTPRARNQLKR 70 80 90 100 110 120 90 100 110 120 130 140 mKIAA1 IAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGYIME :::: :: :.::..:::::::::::::::::::::.:::::: ::::::::::::::::: gi|628 IAKMNWNAIDAEEFEKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSCCKAYEYMGYIME 130 140 150 160 170 180 150 160 170 180 190 200 mKIAA1 KEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTYPKI :::::::::.:::::::.::.:::::::::::::::::::::.::.:::::::::::::: gi|628 KEQAYTDAALNYEMAWKYSNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTYPKI 190 200 210 220 230 240 210 mKIAA1 RKDILDKARASLRP :::::::::::::: gi|628 RKDILDKARASLRP 250 >>gi|34783528|gb|AAH35767.1| TTC21B protein [Homo sapien (282 aa) initn: 1081 init1: 1081 opt: 1087 Z-score: 1388.8 bits: 264.4 E(): 1.2e-68 Smith-Waterman score: 1118; 79.295% identity (84.141% similar) in 227 aa overlap (21-215:56-282) 10 20 30 40 mKIAA1 KGAAALRDRHMLFILPVHSTSPEKQESVQLAVRTAEKLLKEL-------- : :::::::::::::::::::: gi|347 LYNMIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGH 30 40 50 60 70 80 50 60 70 mKIAA1 ------------------------NTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQ :::::::::::.:::::::::::::::::::.:::: gi|347 VQLRIMENYCLMATKQKSNVEQALNTFTEIAASEKEHIPALLGMATAYMILKQTPRARNQ 90 100 110 120 130 140 80 90 100 110 120 130 mKIAA1 LKRIAKMPWNPIEAEDLEKSWLLLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGY ::::::: :: :.::..:::::::::::::::::::::.:::::: :::::::::::::: gi|347 LKRIAKMNWNAIDAEEFEKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSCCKAYEYMGY 150 160 170 180 190 200 140 150 160 170 180 190 mKIAA1 IMEKEQAYTDAAFNYEMAWKHSNQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTY ::::::::::::.:::::::.::.:::::::::::::::::::::.::.::::::::::: gi|347 IMEKEQAYTDAALNYEMAWKYSNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTY 210 220 230 240 250 260 200 210 mKIAA1 PKIRKDILDKARASLRP ::::::::::::::::: gi|347 PKIRKDILDKARASLRP 270 280 215 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 16:30:52 2009 done: Mon Mar 16 16:35:42 2009 Total Scan time: 689.290 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]