# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm01218.fasta.nr -Q ../query/mKIAA1610.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1610, 554 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7913892 sequences Expectation_n fit: rho(ln(x))= 5.9676+/-0.000194; mu= 8.3309+/- 0.011 mean_var=105.8655+/-20.531, 0's: 31 Z-trim: 58 B-trim: 338 in 2/64 Lambda= 0.124651 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|54659922|gb|AAV37181.1| mesoderm induction earl ( 528) 3551 649.4 7.8e-184 gi|149044607|gb|EDL97866.1| similar to mesoderm in ( 529) 3442 629.8 6.2e-178 gi|56204666|emb|CAI18875.1| mesoderm induction ear ( 529) 3413 624.5 2.3e-176 gi|54659926|gb|AAV37183.1| mesoderm induction earl ( 511) 3397 621.6 1.6e-175 gi|54659924|gb|AAV37182.1| mesoderm induction earl ( 510) 3396 621.5 1.9e-175 gi|73956100|ref|XP_864930.1| PREDICTED: similar to ( 529) 3387 619.9 5.9e-175 gi|81910304|sp|Q5UAK0.1|MIER1_MOUSE RecName: Full= ( 556) 3347 612.7 8.9e-173 gi|195540265|gb|AAI68252.1| Mier1 protein [Rattus ( 512) 3287 601.9 1.5e-169 gi|119626914|gb|EAX06509.1| mesoderm induction ear ( 510) 3270 598.8 1.2e-168 gi|82592972|sp|Q5REE1.2|MIER1_PONAB RecName: Full= ( 512) 3270 598.8 1.2e-168 gi|30268212|emb|CAD89921.1| hypothetical protein [ ( 533) 3270 598.8 1.3e-168 gi|74750876|sp|Q8N108.1|MIER1_HUMAN RecName: Full= ( 536) 3270 598.8 1.3e-168 gi|55726185|emb|CAH89866.1| hypothetical protein [ ( 509) 3269 598.6 1.4e-168 gi|21702659|gb|AAM76040.1|AF515446_1 mesoderm indu ( 512) 3269 598.6 1.4e-168 gi|21702661|gb|AAM76041.1|AF515447_1 mesoderm indu ( 511) 3268 598.4 1.6e-168 gi|56204664|emb|CAI18873.1| mesoderm induction ear ( 565) 3268 598.5 1.7e-168 gi|73956093|ref|XP_864849.1| PREDICTED: similar to ( 512) 3243 594.0 3.6e-167 gi|73956102|ref|XP_852070.1| PREDICTED: similar to ( 565) 3242 593.8 4.4e-167 gi|115304808|gb|AAI23514.1| Mesoderm induction ear ( 510) 3230 591.6 1.8e-166 gi|149709489|ref|XP_001500124.1| PREDICTED: mesode ( 564) 3208 587.7 3e-165 gi|114557073|ref|XP_001163423.1| PREDICTED: mesode ( 485) 3111 570.2 4.8e-160 gi|50949966|emb|CAH10526.1| hypothetical protein [ ( 485) 3096 567.5 3.1e-159 gi|82233856|sp|Q5ZKT9.1|MIER1_CHICK RecName: Full= ( 513) 2946 540.5 4.3e-151 gi|80479377|gb|AAI08727.1| MIER1 protein [Homo sap ( 470) 2924 536.6 6.2e-150 gi|56204667|emb|CAI18876.1| mesoderm induction ear ( 450) 2796 513.5 5.1e-143 gi|119626912|gb|EAX06507.1| mesoderm induction ear ( 506) 2779 510.5 4.7e-142 gi|119626915|gb|EAX06510.1| mesoderm induction ear ( 431) 2653 487.8 2.7e-135 gi|22656364|gb|AAM97499.1| mesoderm induction earl ( 457) 2653 487.8 2.9e-135 gi|22656368|gb|AAM97501.1| mesoderm induction earl ( 433) 2652 487.6 3.1e-135 gi|22656366|gb|AAM97500.1| mesoderm induction earl ( 432) 2651 487.4 3.5e-135 gi|56204665|emb|CAI18874.1| mesoderm induction ear ( 486) 2651 487.5 3.8e-135 gi|82208138|sp|Q7T105.1|MIER1_XENLA RecName: Full= ( 495) 2518 463.6 6.2e-128 gi|73956098|ref|XP_864909.1| PREDICTED: similar to ( 492) 2463 453.7 5.8e-125 gi|115527898|gb|AAI25219.1| MIER1 protein [Homo sa ( 370) 2260 417.1 4.6e-114 gi|12855900|dbj|BAB30493.1| unnamed protein produc ( 330) 2211 408.2 1.9e-111 gi|224058401|ref|XP_002195496.1| PREDICTED: mesode ( 499) 2157 398.6 2.2e-108 gi|28611149|gb|AAB81217.2| ER1 [Xenopus laevis] ( 493) 2121 392.2 1.9e-106 gi|57086481|ref|XP_536674.1| PREDICTED: similar to ( 330) 2079 384.5 2.7e-104 gi|47215939|emb|CAF96341.1| unnamed protein produc ( 385) 1930 357.7 3.5e-96 gi|125809116|ref|XP_694533.2| PREDICTED: similar t ( 494) 1618 301.7 3.2e-79 gi|126316946|ref|XP_001381204.1| PREDICTED: hypoth ( 779) 1327 249.5 2.6e-63 gi|224090583|ref|XP_002187257.1| PREDICTED: simila ( 605) 1308 246.0 2.3e-62 gi|28277899|gb|AAH45973.1| Mesoderm induction earl ( 469) 1301 244.7 4.5e-62 gi|149639464|ref|XP_001507861.1| PREDICTED: hypoth ( 561) 1295 243.7 1.1e-61 gi|22760797|dbj|BAC11339.1| unnamed protein produc ( 710) 1293 243.4 1.7e-61 gi|217030833|gb|ACJ73999.1| mesoderm induction ear ( 547) 1289 242.6 2.3e-61 gi|163780990|gb|ABY40773.1| mesoderm induction ear ( 550) 1287 242.2 2.9e-61 gi|118103817|ref|XP_424736.2| PREDICTED: hypotheti ( 685) 1287 242.3 3.4e-61 gi|109077336|ref|XP_001099786.1| PREDICTED: simila ( 550) 1284 241.7 4.2e-61 gi|75075456|sp|Q4R3R9.1|MIER3_MACFA RecName: Full= ( 550) 1284 241.7 4.2e-61 >>gi|54659922|gb|AAV37181.1| mesoderm induction early re (528 aa) initn: 3551 init1: 3551 opt: 3551 Z-score: 3456.8 bits: 649.4 E(): 7.8e-184 Smith-Waterman score: 3551; 100.000% identity (100.000% similar) in 528 aa overlap (27-554:1-528) 10 20 30 40 50 60 mKIAA1 VSDVVKNQLVEVQCRQDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATS :::::::::::::::::::::::::::::::::: gi|546 MFMFNWFTDCLWILFLSNYKPSVESSSPGGSATS 10 20 30 70 80 90 100 110 120 mKIAA1 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 TVRLPEEEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 TVRLPEEEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 VTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 VTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCR 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 YKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 YKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALY 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 ELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 ELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTR 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 SVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 SVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSP 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 PPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 PPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLL 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 TDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 TDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEA 460 470 480 490 500 510 550 mKIAA1 VSHGKFEEHENTND :::::::::::::: gi|546 VSHGKFEEHENTND 520 >>gi|149044607|gb|EDL97866.1| similar to mesoderm induct (529 aa) initn: 2808 init1: 2808 opt: 3442 Z-score: 3350.8 bits: 629.8 E(): 6.2e-178 Smith-Waterman score: 3442; 96.975% identity (98.866% similar) in 529 aa overlap (27-554:1-529) 10 20 30 40 50 60 mKIAA1 VSDVVKNQLVEVQCRQDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATS ::::::::::::::::::::::::::::::::.: gi|149 MFMFNWFTDCLWILFLSNYKPSVESSSPGGSAAS 10 20 30 70 80 90 100 110 120 mKIAA1 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: : gi|149 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIDELLSLYGYGS 40 50 60 70 80 90 130 140 150 160 170 mKIAA1 TVRLPEEEEEEEEEEE-GEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ ::.::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|149 TVQLPEEEEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 SVTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 RYKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL :::::::::::::::::::: :::.::.:::::::::::::::::::::::::::::::: gi|149 RYKENEKVYENDDQLLWDPEYLPEDKVIVFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 YELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA1 PPPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPL :::::::::.::::::::..:. ::::::::::::::::::::::::::::::::::::: gi|149 PPPTASNSSTSQSEKEDGTLSNSNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPL 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA1 LTDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQE :::.:::::: :::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 LTDVDTNGYEENNLATDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQE 460 470 480 490 500 510 540 550 mKIAA1 AVSHGKFEEHENTND ::::::::::::::: gi|149 AVSHGKFEEHENTND 520 >>gi|56204666|emb|CAI18875.1| mesoderm induction early r (529 aa) initn: 3496 init1: 2759 opt: 3413 Z-score: 3322.6 bits: 624.5 E(): 2.3e-176 Smith-Waterman score: 3413; 95.085% identity (98.677% similar) in 529 aa overlap (27-554:1-529) 10 20 30 40 50 60 mKIAA1 VSDVVKNQLVEVQCRQDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATS :::::::::::: ::::::.:::::::::::::: gi|562 MFMFNWFTDCLWTLFLSNYQPSVESSSPGGSATS 10 20 30 70 80 90 100 110 120 mKIAA1 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS .::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|562 DDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGS 40 50 60 70 80 90 130 140 150 160 170 mKIAA1 TVRLPEE-EEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 TVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 SVTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVC ::.:::::::::::::::::::::.:::::::::::::::::::::::::::::::::.: gi|562 SVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGIC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 RYKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL :::::::::::::::::::: :::.::..::::::::::::::::::::::::::::::: gi|562 RYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 YELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 YELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA1 PPPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPL ::::::::::::::::::.::. :::::::::::::::::::::::::.::::::::::: gi|562 PPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGGNKKPL 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA1 LTDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQE .::::::::..::::::::::::::::::::::.::::::::.::.::::::::::::: gi|562 HADMDTNGYETDNLTTDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQE 460 470 480 490 500 510 540 550 mKIAA1 AVSHGKFEEHENTND ::::::::: :::.: gi|562 AVSHGKFEELENTDD 520 >>gi|54659926|gb|AAV37183.1| mesoderm induction early re (511 aa) initn: 3397 init1: 3397 opt: 3397 Z-score: 3307.3 bits: 621.6 E(): 1.6e-175 Smith-Waterman score: 3397; 99.804% identity (100.000% similar) in 509 aa overlap (46-554:3-511) 20 30 40 50 60 70 mKIAA1 QDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHD .::::::::::::::::::::::::::::: gi|546 MAEPSVESSSPGGSATSEDHEFDPSADMLVHD 10 20 30 80 90 100 110 120 130 mKIAA1 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEE 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 EGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 EGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRC 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 KYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 KYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLL 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 WDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 WDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRR 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 LRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 ERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 ERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 DGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 DGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTT 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 DPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 DPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 460 470 480 490 500 510 >>gi|54659924|gb|AAV37182.1| mesoderm induction early re (510 aa) initn: 3396 init1: 3396 opt: 3396 Z-score: 3306.3 bits: 621.5 E(): 1.9e-175 Smith-Waterman score: 3396; 100.000% identity (100.000% similar) in 508 aa overlap (47-554:3-510) 20 30 40 50 60 70 mKIAA1 DGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHDF :::::::::::::::::::::::::::::: gi|546 MLPSVESSSPGGSATSEDHEFDPSADMLVHDF 10 20 30 80 90 100 110 120 130 mKIAA1 DDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 DDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEEE 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 GEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 GEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 YFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 YFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLW 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 DPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 DPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRL 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 RFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 RFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSE 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 RYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 RYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKED 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 GAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 GAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTD 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 PKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 PKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 460 470 480 490 500 510 >>gi|73956100|ref|XP_864930.1| PREDICTED: similar to mes (529 aa) initn: 3470 init1: 2725 opt: 3387 Z-score: 3297.4 bits: 619.9 E(): 5.9e-175 Smith-Waterman score: 3387; 93.951% identity (98.677% similar) in 529 aa overlap (27-554:1-529) 10 20 30 40 50 60 mKIAA1 VSDVVKNQLVEVQCRQDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATS :::::::::::: ::::::.:::::::::::::: gi|739 MFMFNWFTDCLWTLFLSNYQPSVESSSPGGSATS 10 20 30 70 80 90 100 110 120 mKIAA1 EDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDS 40 50 60 70 80 90 130 140 150 160 170 mKIAA1 TVRLPEE-EEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ :.::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TIRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 SVTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVC ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|739 SVASQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGIC 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 RYKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL :::::::::::::::::::: :::.::.:::::::::::::::::::::::::::::::: gi|739 RYKENEKVYENDDQLLWDPEYLPEDKVIVFLKDASRRTGDEKGVEAIPEGSHIKDNEQAL 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 YELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRT 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPS 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA1 PPPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPL ::::::::::::::::::..:. ::::.:::::::.:::::.::::::::::.::::.:: gi|739 PPPTASNSSNSQSEKEDGTISNSNQNGMSSNGPGEMLNKEEIKVEGLHVNGPAGGNKRPL 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA1 LTDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQE .::::::::..::::: ::.:::::::::::::.::::::::.::.::::::::::::: gi|739 HADMDTNGYETDNLTTDQKLGHMTARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQE 460 470 480 490 500 510 540 550 mKIAA1 AVSHGKFEEHENTND :.::::::: :::.: gi|739 AMSHGKFEELENTDD 520 >>gi|81910304|sp|Q5UAK0.1|MIER1_MOUSE RecName: Full=Meso (556 aa) initn: 3347 init1: 3347 opt: 3347 Z-score: 3258.2 bits: 612.7 E(): 8.9e-173 Smith-Waterman score: 3347; 98.817% identity (99.408% similar) in 507 aa overlap (48-554:50-556) 20 30 40 50 60 70 mKIAA1 GCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHDFD .:. . ::::::::::::::::::::::: gi|819 CQITSHLLSLQVQGEYKCGLLCENTSLLIANVRRKVSGGSATSEDHEFDPSADMLVHDFD 20 30 40 50 60 70 80 90 100 110 120 130 mKIAA1 DERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEEEG 80 90 100 110 120 130 140 150 160 170 180 190 mKIAA1 EDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 EDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCKY 140 150 160 170 180 190 200 210 220 230 240 250 mKIAA1 FDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 FDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLWD 200 210 220 230 240 250 260 270 280 290 300 310 mKIAA1 PECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRLR 260 270 280 290 300 310 320 330 340 350 360 370 mKIAA1 FNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 FNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSER 320 330 340 350 360 370 380 390 400 410 420 430 mKIAA1 YDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 YDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDG 380 390 400 410 420 430 440 450 460 470 480 490 mKIAA1 AVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 AVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTDP 440 450 460 470 480 490 500 510 520 530 540 550 mKIAA1 KLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 500 510 520 530 540 550 >>gi|195540265|gb|AAI68252.1| Mier1 protein [Rattus norv (512 aa) initn: 2807 init1: 2807 opt: 3287 Z-score: 3200.4 bits: 601.9 E(): 1.5e-169 Smith-Waterman score: 3287; 96.667% identity (98.627% similar) in 510 aa overlap (46-554:3-512) 20 30 40 50 60 70 mKIAA1 QDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHD .::::::::::::.:::::::::::::::: gi|195 MAEPSVESSSPGGSAASEDHEFDPSADMLVHD 10 20 30 80 90 100 110 120 130 mKIAA1 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEE :::::::::::::::::::::::::::::::::: :::::::: :::.:::::::::::: gi|195 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIDELLSLYGYGSTVQLPEEEEEEEEEE 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 E-GEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRR : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 EEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRR 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 CKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 CKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQL 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 LWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALR ::::: :::.::.::::::::::::::::::::::::::::::::::::::::::::::: gi|195 LWDPEYLPEDKVIVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALR 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEK ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|195 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSTSQSEK 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 EDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLT ::: .:. ::::::::::::::::::::::::::::::::::::::::.:::::: :::. gi|195 EDGMLSNSNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDVDTNGYEENNLA 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 TDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|195 TDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 460 470 480 490 500 510 >>gi|119626914|gb|EAX06509.1| mesoderm induction early r (510 aa) initn: 3353 init1: 2759 opt: 3270 Z-score: 3183.9 bits: 598.8 E(): 1.2e-168 Smith-Waterman score: 3270; 95.098% identity (98.824% similar) in 510 aa overlap (46-554:1-510) 20 30 40 50 60 70 mKIAA1 QDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHD .::::::::::::::.:::::::::::::: gi|119 QPSVESSSPGGSATSDDHEFDPSADMLVHD 10 20 30 80 90 100 110 120 130 mKIAA1 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEE-EEEEEEE ::::::::::::::::::::::::::::::::::::::::::: :::::::: ::::::: gi|119 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEEEEEE 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 EEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRR :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|119 EEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRR 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 CKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQL :::::::::.:::::::::::::::::::::::::::::::::.:::::::::::::::: gi|119 CKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQL 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 LWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALR ::::: :::.::..:::::::::::::::::::::::::::::::::::::.:::::::: gi|119 LWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALR 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEK 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 EDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLT :::.::. :::::::::::::::::::::::::.::::::::::: .::::::::..::: gi|119 EDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGGNKKPLHADMDTNGYETDNLT 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 TDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND :::::::::::::::::::.::::::::.::.:::::::::::::::::::::: :::.: gi|119 TDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQEAVSHGKFEELENTDD 460 470 480 490 500 510 >>gi|82592972|sp|Q5REE1.2|MIER1_PONAB RecName: Full=Meso (512 aa) initn: 3353 init1: 2760 opt: 3270 Z-score: 3183.8 bits: 598.8 E(): 1.2e-168 Smith-Waterman score: 3270; 95.098% identity (98.824% similar) in 510 aa overlap (46-554:3-512) 20 30 40 50 60 70 mKIAA1 QDGCDAENVHQMFMFNWFTDCLWILFLSNYKPSVESSSPGGSATSEDHEFDPSADMLVHD .::::::::::::::.:::::::::::::: gi|825 MAEPSVESSSPGGSATSDDHEFDPSADMLVHD 10 20 30 80 90 100 110 120 130 mKIAA1 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEE-EEEEEEE ::::::::::::::::::::::::::::::::::::::::::: :::::::: ::::::: gi|825 FDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEEEEEE 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA1 EEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRR :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|825 EEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRR 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA1 CKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQL :::::::::.:::::::::::::::::::::::::::::::::.:::::::::::::::: gi|825 CKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQL 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 LWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALR ::::: :::.::..:::::::::::::::::::::::::::::::::::::.:::::::: gi|825 LWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALR 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 RLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKK 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|825 SERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEK 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 EDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLT :::.::. :::::::::::::::::::::::::.::::::::::: .::::::::..::: gi|825 EDGTVSTTNQNGVSSNGPGEILNKEEVKVEGLHINGPTGGNKKPLHADMDTNGYETDNLT 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA1 TDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND :::::::::::::::::::.::::::::.::.:::::::::::::::::::::: :::.: gi|825 TDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQEAVSHGKFEELENTDD 460 470 480 490 500 510 554 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 03:15:08 2009 done: Sun Mar 15 03:22:22 2009 Total Scan time: 970.780 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]