FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0103.ptfa, 297 aa vs ./tmplib.26680 library 1768720 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.3194+/-0.00412; mu= 14.4387+/- 0.275 mean_var=81.7105+/-19.132, 0's: 0 Z-trim: 5 B-trim: 42 in 1/35 Lambda= 0.1419 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1140 ( 926 res) mfj22197 ( 926) 149 40 0.00041 mKIAA4150 ( 1022 res) mfj20071 (1022) 129 36 0.0074 >>mKIAA1140 ( 926 res) mfj22197 (926 aa) initn: 146 init1: 121 opt: 149 Z-score: 166.2 bits: 40.4 E(): 0.00041 Smith-Waterman score: 154; 21.818% identity (24.793% ungapped) in 275 aa overlap (39-297:656-913) 10 20 30 40 50 60 mKIAA0 DVTWEEMRDKMRKWREENSRNSEQIMEVGEELINDYASKLGDDIWIIYEQVMIAALDYGR ..:: .. ... ... .: . . : mKIAA1 EALTMCRDDANALHLLALLFSAQKYYQHALDVINMAITEHPENFNLMFTKVKLEQVLKGP 630 640 650 660 670 680 70 80 90 100 110 120 mKIAA0 DDLALFCLQELRRQFPGSHRVKRLTGMR----FEAME-RYDDAIQLYDRILQEDPTNTAA .. . : : :: . . ..: :.. ::.. . ...:.: : . .. mKIAA1 EEALVTCRQMLR-LWQTLYNFSQLGGLEKDGSFEGLTVKKQNGIHL---TLPDAHDADSG 690 700 710 720 730 740 130 140 150 160 170 mKIAA0 RKRKIAIRKAQGKTVEAIREL---NEYLEQ-----FVGDQEAWHELAELYINEHDYAKAA .: .: : .. ::. :: . :.: .. .. : . :::...... .:. mKIAA1 SRRASSI--AASRLEEAMSELTLTTSVLKQGPMQLWTTLEQIWLQAAELFMEQRQLKEAG 750 760 770 780 790 180 190 200 210 220 230 mKIAA0 FCLEELMMTNPHNH--LYCQ-QYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGL ::..: : .: :: . . :::: :..:. ... . .:: .: ..: . .: mKIAA1 FCIQEAAGLFPTSHSVLYMRGRLAEVK---GSFEE---AKQLYKEALTVNPDGVRIMHSL 800 810 820 830 840 850 240 250 260 270 280 290 mKIAA0 YMSASHIASNPKASAKMKKDNIKYASWAANQINRAYQFAGRSKKETKYSLKAVEDMLETL . :... . :. :. .: .. : ...:.: :. .. . ::. .: .: mKIAA1 GLMLSQLGHKSLAQ-KVLRDAVERQS----TFHEAWQGLGEVLQDQGQNEAAVDCFLTAL 860 870 880 890 900 mKIAA0 QITQS .. : mKIAA1 ELEASSPVLPFSIIAREL 910 920 >>mKIAA4150 ( 1022 res) mfj20071 (1022 aa) initn: 101 init1: 59 opt: 129 Z-score: 143.6 bits: 36.4 E(): 0.0074 Smith-Waterman score: 143; 21.356% identity (23.954% ungapped) in 295 aa overlap (10-290:194-470) 10 20 30 mKIAA0 MAKVTERYDVTWEEMRDKMRKWREENSRNSEQIMEVGEE :: ... . ... ...:. . .:. :. mKIAA4 YINGEGLTSSNMKELENRYQELAVALDSSYVTNKQLSSTIEELKQQNQDTLDQL----EK 170 180 190 200 210 40 50 60 70 80 90 mKIAA0 LINDYASKLGDDIWIIYEQVMIAALDYG-----RDDL--ALFCLQELRRQFPGSHR--VK .:: .::. . . ::... : . .: :: :. :: : . .. mKIAA4 EKKDYQQKLAKEQGSLREQLQVHIQTIGILVSEKAELQTALAHTQQAARQKAGESEDLAS 220 230 240 250 260 270 100 110 120 130 140 mKIAA0 RLTG--MRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIR---KAQGKTVEAIRELN :: . .: .:: .... .. : : : :.. :.. ..:. : .:. : mKIAA4 RLQSSRQRVGELERTLSTVSTQQK--QADRYNKDLTKERDALKLELYKNSKSNEDLRQQN 280 290 300 310 320 330 150 160 170 180 190 200 mKIAA0 EYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGL ::. .: . . : : . .:::. ..: ::.. . . :: mKIAA4 SELEE------------KLRVLVAEKAAAQLGVEELQKKLEMSELLLQQFSSQSSAAGGN 340 350 360 370 380 210 220 230 240 250 260 mKIAA0 ENLELSRKYFAQALKLNNRNMRALFGLYMSASHIASNPKASAKMKKDNIKYASWAANQIN :.:. . . :: .. :..: : . .. : : :. . : .. .. . .. .. mKIAA4 EQLQHAMEERAQLETHVSQLMESLKQLQVERDQYAENLKGESAMWQQRVQQMAEQVHTLK 390 400 410 420 430 440 270 280 290 mKIAA0 RAYQFAGRSKKETKYSLKAVEDMLETLQITQS . . :. .: . :: :.....: mKIAA4 EEKEHRERQVQELETSLAALRSQMEEPPPPEPPAGPSEAEEQLQGEVEQLHKELERLTGQ 450 460 470 480 490 500 297 residues in 1 query sequences 1768720 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:12:20 2006 done: Mon Mar 27 10:12:20 2006 Scan time: 0.490 Display time: 0.030 Function used was FASTA [version 3.4t11 Apr 17, 2002]