Comparison of KIAA cDNA sequences between mouse and human (FLJ00124)

<< Original sequence data >>

mouse  mFLJ00124 (mpk03164)     length:    973 bp
human     (sh00874)     length:   5563 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      333       279       54      16.22
  Total:      333       279       54      16.22

amino acid

  CDS1 :      111        96       15      13.51
  Total:      111        96       15      13.51
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   257 -   589      2 -   859     86 -   196
         human     2 -   334      2 -   358      1 -   111
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
            86 D  H  E  L  R  A  L  D  E  A  Q  R  L  A  K  K  K  102
mpk03164   257 GACCATGAGCTCCGTGCTCTGGATGAAGCTCAGCGACTGGCAAAGAAGAA 306
               ||||| ||||| |||||||||||||||   ||||||||||||||||||||
sh00874      2 GACCACGAGCTTCGTGCTCTGGATGAAAACCAGCGACTGGCAAAGAAGAA 51
             1 D  H  E  L  R  A  L  D  E  N  Q  R  L  A  K  K  K  17

            51 ----+----*----+----*----+----*----+----*----+----* 100
           103  A  D  L  Y  D  E  E  Q  E  Q  G  I  T  L  A  Q  D 119
mpk03164   307 AGCTGACCTTTATGATGAGGAACAAGAGCAGGGCATTACGCTCGCACAAG 356
               |||||||||| ||||||| ||| | || ||||  ||   ||| || ||||
sh00874     52 AGCTGACCTTCATGATGAAGAAGATGAACAGGATATATTGCTGGCGCAAG 101
            18  A  D  L  H  D  E  E  D  E  Q  D  I  L  L  A  Q  D 34

           101 ----+----*----+----*----+----*----+----*----+----* 150
           120   L  E  D  M  W  E  Q  A  F  L  Q  F  R  P  G  A   135
mpk03164   357 ACTTAGAAGATATGTGGGAGCAGGCATTCCTACAGTTCAGACCTGGAGCT 406
               | || ||||||||||||||||||  ||| |||||||||| || |||||||
sh00874    102 ATTTGGAAGATATGTGGGAGCAGAAATTTCTACAGTTCAAACTTGGAGCT 151
            35   L  E  D  M  W  E  Q  K  F  L  Q  F  K  L  G  A   50

           151 ----+----*----+----*----+----*----+----*----+----* 200
           136 R  E  T  E  A  D  K  K  N  D  R  T  S  L  H  R  K  152
mpk03164   407 CGGGAAACAGAAGCTGACAAAAAAAATGACCGGACCTCGTTGCATCGAAA 456
               ||   ||||||||||||  |||| |||||||| || ||  || |  | ||
sh00874    152 CGCATAACAGAAGCTGATGAAAAGAATGACCGAACATCCCTGAACAGGAA 201
            51 R  I  T  E  A  D  E  K  N  D  R  T  S  L  N  R  K  67

           201 ----+----*----+----*----+----*----+----*----+----* 250
           153  L  D  R  N  L  V  L  L  V  R  E  K  L  G  D  Q  D 169
mpk03164   457 GCTAGACAGAAACCTTGTCCTCTTAGTCAGAGAGAAACTTGGAGACCAAG 506
               ||||||||| ||||||||||| ||||||||||||||  |||||||||| |
sh00874    202 GCTAGACAGGAACCTTGTCCTGTTAGTCAGAGAGAAGTTTGGAGACCAGG 251
            68  L  D  R  N  L  V  L  L  V  R  E  K  F  G  D  Q  D 84

           251 ----+----*----+----*----+----*----+----*----+----* 300
           170   V  W  M  L  P  Q  V  E  W  Q  P  G  E  T  L  R   185
mpk03164   507 ATGTTTGGATGCTTCCTCAAGTCGAGTGGCAGCCCGGGGAGACCCTTCGG 556
               |||||||||| || || || |  ||||||||||| |||||||||||||| 
sh00874    252 ATGTTTGGATACTGCCCCAGGCAGAGTGGCAGCCTGGGGAGACCCTTCGA 301
            85   V  W  I  L  P  Q  A  E  W  Q  P  G  E  T  L  R   100

           301 ----+----*----+----*----+----*--- 333
           186 G  T  A  E  R  I  L  A  T  L  S   196
mpk03164   557 GGGACAGCTGAGCGAATCCTGGCCACACTCTCA 589
               || |||||||| |||| ||||||||||||||||
sh00874    302 GGAACAGCTGAACGAACCCTGGCCACACTCTCA 334
           101 G  T  A  E  R  T  L  A  T  L  S   111