Comparison of KIAA cDNA sequences between mouse and human (KIAA0016)
<<Original sequence data>>
mouse mKIAA0016 (mpk02476) length: 997 bp, CDS: 46 - 534
human KIAA0016 (ha00489) length: 3259 bp, CDS: 3 - 539
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 3 - 50 30 18 37.5
CDS: 51 - 539 432 56 11.5
3'UTR: 540 - 2531 333 138 29.3
amino acid
CDS: 51 - 539 151 12 7.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
Q A A A S G A C S D R S E L T
mpk02476 1 ..CAGGCGGCTGCGAGCGGC.CGGCGTGCTCCGATCGGTCGGAGCTAACC 47
| | ||| || |||| || | | |||| || | ||| || |||
ha00489 1 GGCCGTCGGGTGTGAGCTGCGCCGACCGCTCTGAGGGTTCGTGGCCCACC 50
P S G V S C A D R S E G S W P T
51 ----+----*----+----*----+----*----+----*----+----* 100
A A R R L P R P G V R P S R A K
mpk02476 48 GCTGCCAGGCGG..GCTGCCGCGGCCCGGCGTACGCCCCAGTCGAGCGAA 95
||| | |||| ||||||| || | | | | | || |||
ha00489 51 GCTCCTTCGCGGTCCCTGCCGCCACCGTCCACGCTCAGCGTTGTAGAGAA 100
A P S R S L P P P S T L S V V E K
101 ----+----*----+----*----+----*----+----*----+----* 150
M V G R N S A I A A G V C G A L F
mpk02476 96 GATGGTGGGCCGGAACAGCGCCATCGCCGCGGGCGTGTGCGGTGCCCTCT 145
||||||||| |||||||||||||||||||| || || ||||| ||||| |
ha00489 101 GATGGTGGGTCGGAACAGCGCCATCGCCGCCGGTGTATGCGGGGCCCTTT 150
M V G R N S A I A A G V C G A L F
151 ----+----*----+----*----+----*----+----*----+----* 200
I G Y C I Y F D R K R R S D P N
mpk02476 146 TCATCGGGTACTGCATCTACTTCGACCGCAAAAGGCGGAGTGACCCCAAC 195
|||| ||||||||||||||||||||||||||||| || ||||||||||||
ha00489 151 TCATTGGGTACTGCATCTACTTCGACCGCAAAAGACGAAGTGACCCCAAC 200
I G Y C I Y F D R K R R S D P N
201 ----+----*----+----*----+----*----+----*----+----* 250
F K N R L R E R R K K Q K L A K E
mpk02476 196 TTCAAGAACAGGCTTCGAGAACGAAGAAAGAAACAGAAGCTTGCTAAGGA 245
|||||||||||||||||||||||||||||||||||||||||||| |||||
ha00489 201 TTCAAGAACAGGCTTCGAGAACGAAGAAAGAAACAGAAGCTTGCCAAGGA 250
F K N R L R E R R K K Q K L A K E
251 ----+----*----+----*----+----*----+----*----+----* 300
R A G L S K L P D L K D A E A V Q
mpk02476 246 GAGAGCTGGGCTTTCCAAGTTACCTGATTTAAAAGATGCTGAAGCAGTTC 295
||||||||||||||||||||||||||| | |||||||||||||| ||||
ha00489 251 GAGAGCTGGGCTTTCCAAGTTACCTGACCTTAAAGATGCTGAAGCTGTTC 300
R A G L S K L P D L K D A E A V Q
301 ----+----*----+----*----+----*----+----*----+----* 350
K F F L E E I Q L G E E L L A Q
mpk02476 296 AGAAATTCTTCCTTGAAGAGATACAGCTTGGTGAAGAGTTACTAGCACAA 345
|||| |||||||||||||| |||||||||||||||||||||||||| |||
ha00489 301 AGAAGTTCTTCCTTGAAGAAATACAGCTTGGTGAAGAGTTACTAGCTCAA 350
K F F L E E I Q L G E E L L A Q
351 ----+----*----+----*----+----*----+----*----+----* 400
G D Y E K G V D H L T N A I A V C
mpk02476 346 GGTGACTACGAGAAGGGTGTGGACCACCTGACAAATGCCATTGCTGTGTG 395
||||| || |||||||| || ||||| ||||||||||| |||||||||||
ha00489 351 GGTGAATATGAGAAGGGCGTAGACCATCTGACAAATGCAATTGCTGTGTG 400
G E Y E K G V D H L T N A I A V C
401 ----+----*----+----*----+----*----+----*----+----* 450
G Q P Q Q L L Q V L Q Q T L P P P
mpk02476 396 TGGACAGCCTCAGCAGCTGCTGCAAGTGTTACAGCAGACTCTTCCGCCAC 445
||||||||| |||||| | ||||| || |||||||| |||||||| ||||
ha00489 401 TGGACAGCCACAGCAGTTACTGCAGGTCTTACAGCAAACTCTTCCACCAC 450
G Q P Q Q L L Q V L Q Q T L P P P
451 ----+----*----+----*----+----*----+----*----+----* 500
V F Q M L L T K L P T I S Q R I
mpk02476 446 CAGTGTTCCAGATGCTTCTGACCAAGCTTCCGACCATTAGTCAGAGAATT 495
|||||||||||||||||||||| ||||| || || |||||||||||||||
ha00489 451 CAGTGTTCCAGATGCTTCTGACTAAGCTCCCAACAATTAGTCAGAGAATT 500
V F Q M L L T K L P T I S Q R I
501 ----+----*----+----*----+----*----+----*----+----* 550
V S A Q S L A E D D V E *
mpk02476 496 GTAAGTGCTCAGAGCTTGGCTGAAGATGATGTGGAATGAG..CCAGATAC 543
|||||||||||||||||||||||||||||||||||||||| || ||
ha00489 501 GTAAGTGCTCAGAGCTTGGCTGAAGATGATGTGGAATGAGAAACAAATGT 550
V S A Q S L A E D D V E *
551 ----+----*----+----*----+----*----+----*----+----* 600
mpk02476 544 CAACAAGATAAAATCTCAGTAAAATAATTTAACAGTTAGCTTGGAAGCTG 593
||||| ||||||||||||| ||| | || | ||||| || ||
ha00489 551 CAACATAATAAAATCTCAGTTAAAAATATTTTAAAAATTCTTGGTAGTTG 600
601 ----+----*----+----*----+----*----+----*----+----* 650
mpk02476 594 GTCAGCTCTGGGGGATTAAGGGCAAATTATGCTGTCATGAACTGTCCCAC 643
||||||||||||| ||||||||||| ||| ||||||| ||
ha00489 601 AGCAGCTCTGGGGGAATAAGGGCAAATATGCTTGTTATGAACT.....AC 645
651 ----+----*----+----*----+----*----+----*----+----* 700
mpk02476 644 ACTGACGTCTGCCAAAGCGAATATGAACTTTG.GTAGATCCA.TTGTCTG 691
||||| ||| |||||| ||| | |||||| ||||||||| ||||||
ha00489 646 ACTGAAATCTACCAAAGTTAATGTTTACTTTGTGTAGATCCATTTGTCTA 695
701 ----+----*----+----*----+----*----+----*----+----* 750
mpk02476 692 TTCTATTTATTTTT.CCAGTGAAAA..GTATTTTGATAGAG..CTTTTCA 736
|| ||||||||||| |||||||||| |||||||||||||| |||||||
ha00489 696 TTTTATTTATTTTTCCCAGTGAAAAGTGTATTTTGATAGAGAACTTTTCA 745
751 ----+----*----+----*----+----*----+----*----+----* 800
mpk02476 737 TTTTATAAATACAC..TGAGTTAACCAAATATCATGGATTTCCGTTTGTT 784
|| ||||||||||| ||||||| ||||||||||||||| |||| ||
ha00489 746 TTCTATAAATACACTATGAGTTACTAAAATATCATGGATTT.TGTTTATT 794
801 ----+----*----+----*----+----*----+----*----+----* 850
mpk02476 785 CTTAAGACAT......GCAATTCAAATGTAAATACAGTAGAGTATTACTT 828
| | | |||| | || || |||| ||| | | ||| |
ha00489 795 CCTGAAACATAGTTACATAGTTAAACTGTACATA.TGACATGGCTTATGT 843
851 ----+----*----+----*----+----*----+----*----+----* 900
mpk02476 829 AGGTAGAAACTCGTGGTGATTTT...AAGATTGG.......AAAAGAATC 868
| | | ||| | | ||| ||||| || |||| ||
ha00489 844 TAAAAATACCCAGTGCTCAGTTTTGAAAGATAGGCAAAAAAAAAAAAAGT 893
901 ----+----*----+----*----+----*----+----*----+----* 950
mpk02476 869 TGAGGAAGAGTTGAATAACACACATTCTAAAGACTAGAACATTTTATTGT 918
|||| | |||| || ||| | | | ||||||| |||
ha00489 894 ATAGGAGAAACTGAAGAATGTACACTTTTTTAGAGGGCACATTTTGCTGT 943
951 ----+----*----+----*----+----*----+----*----+----* 1000
mpk02476 919 ATGTTGTAAAATTGGGTAGAAAT..TTGTGTTTGTGAAAACTGAGCATTA 966
| | ||||| | |||| | ||||||||||||||||||||||||
ha00489 944 AAATCTGGAAATTTGATAGACTTGACTGTGTTTGTGAAAACTGAGCATTA 993
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpk02476 967 AAACCTTACAGAGACCGTTTCT............................ 988
|| || | || | |||||
ha00489 994 AAGGTTTTGATTGATCCTTTCTTTCCATTTAATCTCTGAGACGTAAATAT 1043
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpk02476 989 .................................................. 989
ha00489 1044 GTGAGGTGTGCTGCTGTGCTGGGTTAACAGCTTCCTTCCCTTTCTGTGTA 1093
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpk02476 989 .................................................. 989
ha00489 1094 GCAGTCTTGAAATGTTCTGTTTAAATCAGTAGGCTTAATGTGTTCTGGGT 1143
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpk02476 989 .................................................. 989
ha00489 1144 ATTTATCTCCTTGTATTTTAAATATATGTAGTTGCAAATAGCACCAGGAA 1193
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpk02476 989 .................................................. 989
ha00489 1194 TTAGATTTCTGTACACCCCTAATCTAGCCTTGTGAGCTTCGCTAGTTAAT 1243
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpk02476 989 .................................................. 989
ha00489 1244 GTGTGCTCACTTTCCCTCCATTTGTTACGTGAGAGAATGCGTCTGCTGAT 1293
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpk02476 989 .................................................. 989
ha00489 1294 CACTGAAGTGTCCCTTTTAGCTTCTGATTCATTGGGTTCTGTTGGGCATC 1343
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpk02476 989 .................................................. 989
ha00489 1344 TTTAAATCCACCTTAACCTGAGGAATGTATGTGGGCAACCAGGCCCTGCA 1393
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpk02476 989 .................................................. 989
ha00489 1394 TTTTTTTATATTCTGAATTTTGCATGCTTGCCTGACTTAGTATTTCTGAA 1443
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpk02476 989 .................................................. 989
ha00489 1444 TTGATGTTTTTTTTAATGGTATAACTATCTTGATTTTCACTGAAATTATA 1493
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpk02476 989 .................................................. 989
ha00489 1494 TGGTTCTGTCACTACTCTGTAAATTAATCCGAAACTTTTAAGGTAACTGG 1543
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpk02476 989 .................................................. 989
ha00489 1544 GATGATCTGCTTGTAAAAATGCTTGTTGCCTTTTGCTTTATCTTCAGTGT 1593
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpk02476 989 .................................................. 989
ha00489 1594 ACCTCCTTAATCCTGCTTCAACTTGATTATCTTGTGAAACGATGAGAGTA 1643
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpk02476 989 .................................................. 989
ha00489 1644 AGTTGCAACCTTGTGACTGAAAACTTGAAAAGAGTGGAGCAGGTGGGACC 1693
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mpk02476 989 .................................................. 989
ha00489 1694 TCTTATTCTCAAATAGTGACATATTCTCCGTAGTCACAGTTTCAGAACTG 1743
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mpk02476 989 .................................................. 989
ha00489 1744 AGTAAGGATCCTTGGTACTTGGTGGCATCTGTTGAACTGAGGAGCATTTC 1793
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpk02476 989 .................................................. 989
ha00489 1794 TCATTGTAAAGATTGCCTTTGTTCTGTCTAAAAGTCTGGAGAAATCCCAA 1843
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpk02476 989 .................................................. 989
ha00489 1844 AGACTTTTCCTATGTACTAGGCATTTTATTTTGATTGACTTACAAACTCT 1893
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpk02476 989 .................................................. 989
ha00489 1894 TCTTAATCATTATCAATCTCGGTTTTTTTGTGGTGCAGTGGAAGGAGAAA 1943
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mpk02476 989 .................................................. 989
ha00489 1944 TAGGTCTAGTTTCTGCCTCTGATTAGCCGCACAGCCTTGAACAAATCACA 1993
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mpk02476 989 .................................................. 989
ha00489 1994 TTTCATCTTTGAACTTACCTCTACTGTTAGACTAGGCGACTCACATTTGA 2043
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpk02476 989 .................................................. 989
ha00489 2044 GGACTTTTCTCGGGTATCTTGAGGGTTTGTGATCCTGAACCCTTAAACAG 2093
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpk02476 989 .................................................. 989
ha00489 2094 TGCTTTTTTGTTACACAGGAGGGCTTTTTTGGGGGGATGACCAGTACAGA 2143
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpk02476 989 .................................................. 989
ha00489 2144 CATGCCAGTTAGTTTTACTAGTGGGATCCCAAATCCAAAGCAGTGTAGTG 2193
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpk02476 989 .................................................. 989
ha00489 2194 GTGATTGGTCAGTGACTAACCAGGCAGCTAAGAAGTCTTAGGCAGCAGCC 2243
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpk02476 989 .................................................. 989
ha00489 2244 CAGACATGTATAGAGGGGCAGTTAGAGGGAGAACAGGGGTGGGAAAGGGA 2293
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpk02476 989 .................................................. 989
ha00489 2294 GCAAGGGGCAGATAGCTCAGCAAGGAAAGAATGGGCTCAGAAAAAGGAGG 2343
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpk02476 989 .................................................. 989
ha00489 2344 GCTGGCTGGAGGAGTGAGGGGCAGCTTAAGTTTGGGGAGGGTAGAAACGC 2393
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpk02476 989 .................................................. 989
ha00489 2394 CGTTTCCTTGGGAACTGGAGTGCAGTATGAGCTGGGTGTCACTTGGCTCT 2443
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpk02476 989 .................................................. 989
ha00489 2444 GAACATACTGGCTTTGCTGTAATGCTTGAAAAGGCGTTGGTATCTTCATT 2493
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpk02476 989 ......................CGTTTACTT................... 997
||||| |||
ha00489 2494 TTACAGTTCATTAACCCAAGTACGTTTTCTTATTTAAATGACAACTTTGG 2543
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpk02476 998 .................................................. 998
ha00489 2544 TGCTTTAAAATGAGGTACCACTTTTTAAAGCTAGCTGTGTCGAGTTAAAG 2593
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpk02476 998 .................................................. 998
ha00489 2594 AAAAAATCAGCAGTTTTTTCTCCCAGAAATGTAATTGCCAAACACTTTTC 2643
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpk02476 998 .................................................. 998
ha00489 2644 ATCCCCATCTTAAGTTTTACAAGGTGATGTAATCAGCTTGTTGTAGTGAT 2693
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpk02476 998 .................................................. 998
ha00489 2694 GCTGGCCAAATGGTGCTCAGCAGGTGAGAACAAAAAAACCCCAGATTTCA 2743
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpk02476 998 .................................................. 998
ha00489 2744 GTGAACTAATACACAGCTTGAGCGTTTCCATGTGCTAATGTTGCACACTT 2793
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpk02476 998 .................................................. 998
ha00489 2794 ACTAAAAAACTTTGGAAATGGAAAATAATGTATTAGTGCAACAGTTGATG 2843
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpk02476 998 .................................................. 998
ha00489 2844 TGCTTCTTTGGGCAAAGATATAGTTTTGTTCCACAATTTGTACTTAAAAG 2893
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpk02476 998 .................................................. 998
ha00489 2894 CGAAAGAACATTGAAAACATAGACTTACTGGCTGTAGCAATGCTGGCCTG 2943
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpk02476 998 .................................................. 998
ha00489 2944 TTAACTGATAACTAGAACTTAGGTTCACGTTTATGTAAAGTGTGTAAAAC 2993
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpk02476 998 .................................................. 998
ha00489 2994 CTAGTAGAGCTTGCATAGTCGGCACTCAGTAAATGTTTGGTTCCTTTTGC 3043
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpk02476 998 .................................................. 998
ha00489 3044 CCCTTGGTAAGTTTATTTTACCATCCTCCCACCTGCCATTCTGACTTTAT 3093
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpk02476 998 .................................................. 998
ha00489 3094 TAAATCAACATGTGGACCAGAGTGTTAATGAGATGTTATTGCAGAAGAGA 3143
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpk02476 998 .................................................. 998
ha00489 3144 TTGAGAAAATTGGTATATCATGCAGATAACATACAAAATCTTTTTGTAAC 3193
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpk02476 998 .................................................. 998
ha00489 3194 GTAAAAAATGCAGTTTTATTATTGCTTGTGCCTCAACTGTTTAAGTGAAT 3243
3251 ----+----*----+- 3266
mpk02476 998 ................ 998
ha00489 3244 ATTAAAGGGCTTGGAG 3259