Comparison of KIAA cDNA sequences between mouse and human (KIAA0116)
<<Original sequence data>>
mouse mKIAA0116 (mpk02408) length: 987 bp, CDS: 3 - 863
human KIAA0116 (ha00800) length: 1011 bp, CDS: 2 - 874
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 12 - 13 2 0 0.0
CDS: 14 - 874 774 87 10.1
3'UTR: 875 - 1008 85 42 33.1
amino acid
CDS: 14 - 874 275 12 4.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
L S E A E K V Y I V H G V
mpk02408 1 ...........CGCTAAGCGAGGCCGAGAAGGTCTACATCGTTCATGGAG 39
|||| |||||||| |||||||| |||||||| ||||| |
ha00800 1 GGCGTCCGTGACGCTGAGCGAGGCGGAGAAGGTGTACATCGTGCATGGCG 50
A S V T L S E A E K V Y I V H G V
51 ----+----*----+----*----+----*----+----*----+----* 100
Q E D L R V D G R G C E D Y R C
mpk02408 40 TGCAGGAAGACCTTCGGGTGGATGGCCGTGGCTGTGAGGACTACCGATGT 89
| ||||||||||| || |||||||||||||||||||||||||||||||||
ha00800 51 TCCAGGAAGACCTCCGTGTGGATGGCCGTGGCTGTGAGGACTACCGATGT 100
Q E D L R V D G R G C E D Y R C
101 ----+----*----+----*----+----*----+----*----+----* 150
V E V E T D V V S N T S G S A R V
mpk02408 90 GTTGAAGTAGAGACTGATGTGGTGTCTAACACCAGTGGGTCTGCCAGAGT 139
|| ||||| || |||||||||||||| ||||| |||||||| ||||| ||
ha00800 101 GTCGAAGTGGAAACTGATGTGGTGTCCAACACTAGTGGGTCCGCCAGGGT 150
V E V E T D V V S N T S G S A R V
151 ----+----*----+----*----+----*----+----*----+----* 200
K L G H T D F L V G V K A E M G T
mpk02408 140 CAAGCTGGGTCACACAGACTTCTTGGTGGGAGTGAAAGCAGAAATGGGGA 189
||||||||||||||||||| ||||||||||||||||||||||||||||||
ha00800 151 CAAGCTGGGTCACACAGACATCTTGGTGGGAGTGAAAGCAGAAATGGGGA 200
K L G H T D I L V G V K A E M G T
201 ----+----*----+----*----+----*----+----*----+----* 250
P K L E K P N E G Y L E F F V D
mpk02408 190 CACCGAAGCTGGAGAAACCGAATGAAGGCTACCTGGAGTTCTTTGTTGAC 239
| ||||||||||||||||| |||||||||||| |||||||||||||||||
ha00800 201 CGCCGAAGCTGGAGAAACCAAATGAAGGCTACTTGGAGTTCTTTGTTGAC 250
P K L E K P N E G Y L E F F V D
251 ----+----*----+----*----+----*----+----*----+----* 300
C S A N A T P E F E G R G G D D L
mpk02408 240 TGTTCAGCCAATGCTACCCCAGAATTCGAAGGGCGAGGAGGTGATGACCT 289
|||||||||| ||||||||| ||||| ||||| ||||||||||||||||
ha00800 251 TGTTCAGCCAGTGCTACCCCTGAATTTGAAGGTAGAGGAGGTGATGACCT 300
C S A S A T P E F E G R G G D D L
301 ----+----*----+----*----+----*----+----*----+----* 350
G T E I A N T L Y R I F N N K S S
mpk02408 290 TGGCACAGAGATTGCTAACACCCTCTACCGGATATTTAACAACAAGAGCA 339
|||||| ||||| |||||||||||||| |||||||||||||| || ||||
ha00800 301 TGGCACCGAGATCGCTAACACCCTCTATCGGATATTTAACAATAAAAGCA 350
G T E I A N T L Y R I F N N K S S
351 ----+----*----+----*----+----*----+----*----+----* 400
V D L R S L C I S P R E H C W V
mpk02408 340 GCGTAGACCTGAGGTCCCTCTGCATCAGTCCTCGAGAGCACTGCTGGGTT 389
| || ||| | | | |||||||||| |||||||| |||||||||||||||
ha00800 351 GTGTCGACTTAAAGACCCTCTGCATTAGTCCTCGGGAGCACTGCTGGGTT 400
V D L K T L C I S P R E H C W V
401 ----+----*----+----*----+----*----+----*----+----* 450
L Y V D V L L L E C G G N L F D A
mpk02408 390 CTATATGTGGATGTGCTGCTGCTGGAATGTGGTGGGAATTTGTTTGATGC 439
|| ||||||||||||||||| |||||||||||||| ||||||||||||||
ha00800 401 CTCTATGTGGATGTGCTGCTTCTGGAATGTGGTGGAAATTTGTTTGATGC 450
L Y V D V L L L E C G G N L F D A
451 ----+----*----+----*----+----*----+----*----+----* 500
I S I A V K A A L F N T R I P R V
mpk02408 440 TATTTCCATTGCTGTAAAAGCTGCTCTCTTCAACACAAGGATACCAAGGG 489
||||||||||||||||| |||||||||||||| ||||||||||||||||
ha00800 451 CATTTCCATTGCTGTAAAGGCTGCTCTCTTCAATACAAGGATACCAAGGG 500
I S I A V K A A L F N T R I P R V
501 ----+----*----+----*----+----*----+----*----+----* 550
R V L E D E E G A K D I E L S D
mpk02408 490 TTCGTGTTCTGGAGGATGAAGAGGGGGCAAAGGACATTGAGCTGTCTGAC 539
|||| ||| ||||||||||||||||| | ||||||||||| |||| ||
ha00800 501 TTCGAGTTTTGGAGGATGAAGAGGGGTCGAAGGACATTGAATTGTCAGAT 550
R V L E D E E G S K D I E L S D
551 ----+----*----+----*----+----*----+----*----+----* 600
D P Y D C I R L S V E N V P C I V
mpk02408 540 GATCCTTATGACTGCATCCGACTGAGTGTAGAGAATGTCCCCTGCATTGT 589
|| |||||||||||||| ||||| ||||| ||||||||||||||||||||
ha00800 551 GACCCTTATGACTGCATACGACTAAGTGTGGAGAATGTCCCCTGCATTGT 600
D P Y D C I R L S V E N V P C I V
601 ----+----*----+----*----+----*----+----*----+----* 650
T L C K I G C R H V V D A T L Q E
mpk02408 590 CACCCTGTGCAAGATTGGCTGCCGGCATGTGGTAGATGCCACACTTCAAG 639
||| |||||||||||||||| ||||||||||| ||||| || ||||| |
ha00800 601 CACTCTGTGCAAGATTGGCTATCGGCATGTGGTGGATGCTACTCTTCAGG 650
T L C K I G Y R H V V D A T L Q E
651 ----+----*----+----*----+----*----+----*----+----* 700
E A C S L A S L L V S V T S K G
mpk02408 640 AGGAGGCCTGTTCCCTGGCCAGCTTGCTGGTGTCAGTGACCAGCAAGGGA 689
|||||||||| || |||||||||||||||||||| |||||||||||||||
ha00800 651 AGGAGGCCTGCTCGCTGGCCAGCTTGCTGGTGTCGGTGACCAGCAAGGGA 700
E A C S L A S L L V S V T S K G
701 ----+----*----+----*----+----*----+----*----+----* 750
V V T C M R K V G K G S L D P E S
mpk02408 690 GTAGTGACATGCATGAGGAAAGTGGGGAAAGGAAGCCTGGATCCTGAGAG 739
|| ||||| |||||||||||||||||||| || |||||||| || |||||
ha00800 701 GTTGTGACGTGCATGAGGAAAGTGGGGAAGGGCAGCCTGGACCCAGAGAG 750
V V T C M R K V G K G S L D P E S
751 ----+----*----+----*----+----*----+----*----+----* 800
I F E M M E S S K R V G K V L H V
mpk02408 740 CATCTTCGAGATGATGGAGAGCAGCAAGCGAGTGGGCAAGGTGCTGCACG 789
|||||||||||||||||||| ||||||| ||||||||||| ||||| |
ha00800 751 CATCTTCGAGATGATGGAGACTGGCAAGCGTGTGGGCAAGGTACTGCATG 800
I F E M M E T G K R V G K V L H A
801 ----+----*----+----*----+----*----+----*----+----* 850
S L Q S L L H K E E S L G P K R
mpk02408 790 TGTCCTTGCAGAGCCTTCTGCACAAGGAAGAAAGCCTGGGGCCCAAGAGG 839
||||||||||| ||||||||||||||||||||||||||||||||||
ha00800 801 CCTCCTTGCAGAGTGTTCTGCACAAGGAAGAAAGCCTGGGGCCCAAGAGA 850
S L Q S V L H K E E S L G P K R
851 ----+----*----+----*----+----*----+----*----+----* 900
P R V G F L G *
mpk02408 840 CCGAGAGTCGGGTTCCTGGGGTGATTT..CTCTCCACTGCAC.......G 880
| || ||| || |||||||| |||||| || ||||| | |
ha00800 851 CAGAAAGTTGGATTCCTGGGATGATTTGCACATCAACTGCTCAACTGTGG 900
Q K V G F L G *
901 ----+----*----+----*----+----*----+----*----+----* 950
mpk02408 881 TTGGTTGCCTCACTTTTCATTGACACTGGTTTGTATATATTTCTCTTAAT 930
| ||| | ||| | || | || |||| |||||||||| ||||
ha00800 901 ATTGTTTTTTACTTTTCCTTTTAAACCGGTTCGTATATATTTTTCTTCGC 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
mpk02408 931 TGTCA.AAATTTAATTCCACATTTGTAAATGTAAAAATAAAGTCTATTTT 979
||| | |||||| | |||||||| |||||||| ||||| |||||||
ha00800 951 TGTTACGAATTTACAGCAGCATTTGTACATGTAAAATTAAAGGCTATTTT 1000
1001 ----+----*- 1011
mpk02408 980 TTTTGGTC... 987
| |
ha00800 1001 CTGGTCTGGTT 1011