Comparison of KIAA cDNA sequences between mouse and human (KIAA0101)
<<Original sequence data>>
mouse mKIAA0101 (mpk02179) length: 899 bp, CDS: 18 - 440
human KIAA0101 (ha00771) length: 836 bp, CDS: 5 - 397
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 3 - 24 7 5 41.7
CDS: 25 - 445 324 60 15.6
3'UTR: 446 - 899 261 150 36.5
amino acid
CDS: 25 - 445 102 26 20.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
K R P G G N I I S G S S
mpk02179 1 ..GAAAGAGACCCATTTAAACGGTGGCGGGAACATCATTTTCGGGTTCTT 48
|||| | | | ||| || | ||| |||| |||
ha00771 1 GTGAAACACCCTC...........GGCTGGGAAGTCA.GTTCGTTCTCTC 38
N T L G W E V S S F S P
51 ----+----*----+----*----+----*----+----*----+----* 100
L V S S
mpk02179 49 CTCTAATTGAGACATCTGCAGTTGGGGTGACGGTGAAAGTTGTCTCTTCT 98
||| | ||||||||
ha00771 39 CTC....................................TCCTCTCTTCT 52
L L S S
101 ----+----*----+----*----+----*----+----*----+----* 150
C V N M V R T K A N Y V P G A Y R
mpk02179 99 TGTGTGAACATGGTGCGGACCAAAGCAAACTACGTTCCAGGAGCCTACAG 148
||| |||||||||||||||| |||||| || |||||||| | |||||
ha00771 53 TGTTTGAACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAG 102
C L N M V R T K A D S V P G T Y R
151 ----+----*----+----*----+----*----+----*----+----* 200
K A V A S Q A P R K V L G S S T F
mpk02179 149 AAAAGCGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGGCTCCTCCACCT 198
||||| ||||||| ||| |||||| || ||||||||||| || |||||||
ha00771 103 AAAAGTGGTGGCTGCTCGAGCCCCCAGAAAGGTGCTTGGTTCTTCCACCT 152
K V V A A R A P R K V L G S S T S
201 ----+----*----+----*----+----*----+----*----+----* 250
V T N - S S S S R K A E N K Y
mpk02179 199 TTGTCACCAATT...CTTCAAGTTCGTCGAGAAAAGCTGAAAATAAGTAT 245
|| ||| |||| | ||| ||| ||||| |||||||||||||| |||
ha00771 153 CTGCCACTAATTCGACATCAGTTTCATCGAGGAAAGCTGAAAATAAATAT 202
A T N S T S V S S R K A E N K Y
251 ----+----*----+----*----+----*----+----*----+----* 300
A G G N P V C V R P T P K W Q K G
mpk02179 246 GCAGGAGGGAACCCAGTCTGTGTGCGCCCAACTCCCAAGTGGCAAAAAGG 295
|||||||||||||| || || |||||||||||||||||||||||||||||
ha00771 203 GCAGGAGGGAACCCCGTTTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGG 252
A G G N P V C V R P T P K W Q K G
301 ----+----*----+----*----+----*----+----*----+----* 350
I G E F F R L S P K E S K K E N Q
mpk02179 296 CATCGGGGAATTCTTCAGGCTGTCCCCTAAAGAGTCTAAAAAGGAAAACC 345
|| || |||||||| ||| ||||||||||||| ||| |||| || || |
ha00771 253 AATTGGAGAATTCTTTAGGTTGTCCCCTAAAGATTCTGAAAAAGAGAATC 302
I G E F F R L S P K D S E K E N Q
351 ----+----*----+----*----+----*----+----*----+----* 400
A P E E A G T S G L G K A K R K
mpk02179 346 AGGCTCCTGAAGAAGCAGGAACCAGTGGCTTAGGAAAAGCAAAGAGAAAA 395
|| ||||||||| ||||||| ||||||||||||||||||||||||||||
ha00771 303 AGATTCCTGAAGAGGCAGGAAGCAGTGGCTTAGGAAAAGCAAAGAGAAAA 352
I P E E A G S S G L G K A K R K
401 ----+----*----+----*----+----*----+----*----+----* 450
A C P L Q P D H R D D E N E *
mpk02179 396 GCTTGTCCTTTGCAACCTGATCACAGAGATGATGAAAACGAATAGAATTT 445
|| |||||||||||||||||||||| | |||||||||| |||||||| ||
ha00771 353 GCATGTCCTTTGCAACCTGATCACACAAATGATGAAAAAGAATAGAACTT 402
A C P L Q P D H T N D E K E *
451 ----+----*----+----*----+----*----+----*----+----* 500
mpk02179 446 ACTCA......TCTGAATAATGTCTCC..GGTTTTTCTACATTACTTACA 487
|||| | ||||||| |||||| | || || | || |
ha00771 403 TCTCATTCATCTTTGAATAACGTCTCCTTGTTTACCCTGGTATTCTAGAA 452
501 ----+----*----+----*----+----*----+----*----+----* 550
mpk02179 488 TGTAAATTTGGGTAAATGAGTTTG.TCCAATTGGC.TTGTTGAGGGG... 532
||||||||| |||||| ||||| ||||||| || ||||||| |
ha00771 453 TGTAAATTTACATAAATGTGTTTGTTCCAATTAGCTTTGTTGAACAGGCA 502
551 ----+----*----+----*----+----*----+----*----+----* 600
mpk02179 533 ......AAAAAAAATTAGGCTAAAATTTAGCCATTCAAAAGAAACCAGAT 576
|||||| ||||| | |||||||| |||||||| || |
ha00771 503 TTTAATTAAAAAATTTAGGTTTAAATTTAGATGTTCAAAAG....TAGTT 548
601 ----+----*----+----*----+----*----+----*----+----* 650
mpk02179 577 GTAAGAATGGAGAATTTTTATAATTTGTAAATTTGAATTGCAT..GCTTA 624
|| | | | |||||||| || | | | | | | || | | |
ha00771 549 GTGAAATTTGAGAATTTGTAAGACTAATTATGGTAACTTAGCTTAGTATT 598
651 ----+----*----+----*----+----*----+----*----+----* 700
mpk02179 625 CACTTATGCCCTATGCTCCTCCTTTCTTACCTGTTAAAGCTTCTTCTTAA 674
|| | | || | | | ||||| | ||| ||| ||
ha00771 599 CAATATAATGCATTGTTTGGTTTCTTTTACCAAATTAAGTGTCTAGTTCT 648
701 ----+----*----+----*----+----*----+----*----+----* 750
mpk02179 675 AGCCAA........CGTTCCCTGGCACTCTACTTGCTACTCTACGGT... 713
|| || | || | | | |||| || | | | | ||
ha00771 649 TGCTAAAATCAAGTCATTGCATTGTGTTCTAATTACAAGTATGTTGTATT 698
751 ----+----*----+----*----+----*----+----*----+----* 800
mpk02179 714 ....CTTTGCTTAGATTTTTGTACTGATGCCATTTT..ATGGGCAGTGAT 757
|||||||||||| |||||||| ||||||||| ||| ||||
ha00771 699 TGAGATTTGCTTAGATTGTTGTACTGCTGCCATTTTTATTGGTGTTTGAT 748
801 ----+----*----+----*----+----*----+----*----+----* 850
mpk02179 758 TATGGAAATGACGCCATATTGTTATGGCATGT..TTGCTTTAAAAATTTG 805
||| | |||| |||||||||| | | | | |||||||||||| |
ha00771 749 TATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAAAAAGCAG 798
851 ----+----*----+----*----+----*----+----*----+----* 900
mpk02179 806 ACTTAGGCTGGGTGTGGTGGCGCACGCCTTTAATCTTTAAGAGTGAGTTC 855
| |||| | | | || || || || | | ||
ha00771 799 AGTTAGATT...........TTTGCACATTAAAAAATTCAGTATTAATT. 836
901 ----+----*----+----*----+----*----+----*---- 944
mpk02179 856 CAGGTCAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACC 899
ha00771 837 ............................................ 837