# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpk01802.fasta.nr -Q ../query/mKIAA0108.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0108, 273 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920620 sequences Expectation_n fit: rho(ln(x))= 4.4858+/-0.000183; mu= 12.6349+/- 0.010 mean_var=70.8520+/-13.951, 0's: 25 Z-trim: 28 B-trim: 2939 in 1/65 Lambda= 0.152370 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109689716|ref|NP_032666.2| lysosomal-associated ( 308) 1885 423.1 2.8e-116 gi|149050909|gb|EDM03082.1| lysosomal-associated p ( 308) 1836 412.4 4.9e-113 gi|26344493|dbj|BAC35897.1| unnamed protein produc ( 233) 1591 358.4 6.6e-97 gi|81885191|sp|Q6P501.1|LAP4A_RAT RecName: Full=Ly ( 233) 1586 357.3 1.4e-96 gi|3122416|sp|Q60961.1|LAP4A_MOUSE RecName: Full=L ( 233) 1576 355.1 6.5e-96 gi|75075710|sp|Q4R4I5.1|LAP4A_MACFA RecName: Full= ( 233) 1574 354.6 8.8e-96 gi|75043917|sp|Q6QRN8.1|LAP4A_BOVIN RecName: Full= ( 233) 1567 353.1 2.6e-95 gi|3122413|sp|Q15012.1|LAP4A_HUMAN RecName: Full=L ( 233) 1567 353.1 2.6e-95 gi|13111971|gb|AAH03158.1| Lysosomal protein trans ( 233) 1563 352.2 4.7e-95 gi|82074509|sp|Q5EI37.1|LAP4A_GECJA RecName: Full= ( 233) 1561 351.8 6.4e-95 gi|149727742|ref|XP_001503403.1| PREDICTED: simila ( 233) 1532 345.4 5.3e-93 gi|149641367|ref|XP_001505310.1| PREDICTED: hypoth ( 230) 1464 330.5 1.7e-88 gi|197128714|gb|ACH45212.1| putative lysosomal-ass ( 229) 1429 322.8 3.4e-86 gi|82083030|sp|Q5ZML7.1|LAP4A_CHICK RecName: Full= ( 229) 1414 319.5 3.4e-85 gi|37183174|gb|AAQ89387.1| MTP [Homo sapiens] ( 215) 1374 310.6 1.4e-82 gi|30027165|gb|AAP06758.1| lysosomal-associated pr ( 233) 1355 306.5 2.7e-81 gi|26379552|dbj|BAB29087.2| unnamed protein produc ( 197) 1325 299.8 2.4e-79 gi|109102129|ref|XP_001094866.1| PREDICTED: simila ( 211) 1316 297.9 9.7e-79 gi|62630193|gb|AAX88938.1| unknown [Homo sapiens] ( 196) 1301 294.5 9.1e-78 gi|37590177|gb|AAH58878.1| Lysosomal-associated pr ( 229) 1299 294.2 1.4e-77 gi|55251328|emb|CAH69126.1| lysosomal-associated p ( 238) 1299 294.2 1.4e-77 gi|47208831|emb|CAF90335.1| unnamed protein produc ( 230) 1292 292.6 4e-77 gi|114576331|ref|XP_001138771.1| PREDICTED: lysoso ( 191) 1274 288.6 5.5e-76 gi|49257726|gb|AAH74539.1| MGC69213 protein [Xenop ( 231) 1259 285.4 6.1e-75 gi|56270472|gb|AAH87426.1| LOC496032 protein [Xeno ( 231) 1223 277.5 1.5e-72 gi|209155470|gb|ACI33967.1| Lysosomal-associated t ( 245) 1223 277.5 1.5e-72 gi|49118319|gb|AAH73327.1| MGC80735 protein [Xenop ( 231) 1212 275.1 7.9e-72 gi|197128718|gb|ACH45216.1| putative lysosomal-ass ( 182) 1131 257.1 1.5e-66 gi|114576319|ref|XP_001138597.1| PREDICTED: lysoso ( 223) 1053 240.1 2.6e-61 gi|28189693|dbj|BAC56461.1| similar to lysosomal-a ( 149) 991 226.3 2.5e-57 gi|119621238|gb|EAX00833.1| lysosomal-associated p ( 144) 894 204.9 6.3e-51 gi|119621240|gb|EAX00835.1| lysosomal-associated p ( 122) 804 185.1 5.1e-45 gi|75045086|sp|Q71SV0.1|LAP4B_BOVIN RecName: Full= ( 226) 728 168.7 8.3e-40 gi|151554322|gb|AAI49606.1| Lysosomal protein tran ( 226) 728 168.7 8.3e-40 gi|14582685|gb|AAK69595.1|AF317417_1 lysosomal-ass ( 226) 719 166.7 3.3e-39 gi|75076351|sp|Q4R6E8.1|LAP4B_MACFA RecName: Full= ( 226) 718 166.5 3.8e-39 gi|117646200|emb|CAL38567.1| hypothetical protein ( 226) 718 166.5 3.8e-39 gi|7320865|emb|CAB81951.1| integral membrane trans ( 283) 719 166.8 3.8e-39 gi|52545609|emb|CAB66876.2| hypothetical protein [ ( 287) 719 166.8 3.9e-39 gi|30039270|gb|AAP14034.1| lysosomal associated tr ( 317) 719 166.8 4.1e-39 gi|118087175|ref|XP_001233339.1| PREDICTED: hypoth ( 224) 717 166.2 4.4e-39 gi|81879687|sp|Q91XQ6.1|LAP4B_MOUSE RecName: Full= ( 227) 717 166.2 4.4e-39 gi|74714056|sp|Q86VI4.1|LAP4B_HUMAN RecName: Full= ( 370) 719 166.9 4.6e-39 gi|114637784|ref|XP_508462.2| PREDICTED: similar t ( 307) 716 166.2 6.4e-39 gi|73974060|ref|XP_532277.2| PREDICTED: similar to ( 393) 715 166.0 8.8e-39 gi|29561810|emb|CAD87806.1| lysosomal associated p ( 225) 712 165.1 9.5e-39 gi|73909107|gb|AAH38117.1| LAPTM4B protein [Homo s ( 317) 711 165.1 1.4e-38 gi|224046542|ref|XP_002198806.1| PREDICTED: simila ( 432) 708 164.6 2.7e-38 gi|81883433|sp|Q5U1W4.1|LAP4B_RAT RecName: Full=Ly ( 227) 705 163.6 2.8e-38 gi|169642566|gb|AAI60779.1| LOC100158325 protein [ ( 225) 703 163.2 3.7e-38 >>gi|109689716|ref|NP_032666.2| lysosomal-associated pro (308 aa) initn: 1885 init1: 1885 opt: 1885 Z-score: 2243.9 bits: 423.1 E(): 2.8e-116 Smith-Waterman score: 1885; 100.000% identity (100.000% similar) in 273 aa overlap (1-273:36-308) 10 20 30 mKIAA0 GGPEDASFGCGHRRRVVWVEPLGRKLLSGA :::::::::::::::::::::::::::::: gi|109 EGEIPSRRPARAAPGAQSAGAQELARARAEGGPEDASFGCGHRRRVVWVEPLGRKLLSGA 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 WARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVE 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA0 VTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAISYQVGWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAISYQVGWLI 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 PFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFV 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA0 VFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQYVLPTYEMAVKIPEKEPPPPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQYVLPTYEMAVKIPEKEPPPPY 250 260 270 280 290 300 mKIAA0 LPA ::: gi|109 LPA >>gi|149050909|gb|EDM03082.1| lysosomal-associated prote (308 aa) initn: 1836 init1: 1836 opt: 1836 Z-score: 2185.7 bits: 412.4 E(): 4.9e-113 Smith-Waterman score: 1836; 97.802% identity (99.267% similar) in 273 aa overlap (1-273:36-308) 10 20 30 mKIAA0 GGPEDASFGCGHRRRVVWVEPLGRKLLSGA ::::::::: :.:::::::::::::::::: gi|149 EGESPSRGPARAAPSAQSAGAQELAGARAEGGPEDASFGFGQRRRVVWVEPLGRKLLSGA 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA0 WARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVE :::.::.:: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 WARARPTRFPMVSMTFKRSRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVE 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA0 VTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAISYQVGWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAISYQVGWLI 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 PFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFV 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA0 VFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQYVLPTYEMAVKIPEKEPPPPY :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|149 VFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAVKIPEKEPPPPY 250 260 270 280 290 300 mKIAA0 LPA ::: gi|149 LPA >>gi|26344493|dbj|BAC35897.1| unnamed protein product [M (233 aa) initn: 1591 init1: 1591 opt: 1591 Z-score: 1896.1 bits: 358.4 E(): 6.6e-97 Smith-Waterman score: 1591; 100.000% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::::::::::: gi|263 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::::::::::::::: gi|263 VLPTYEMAVKIPEKEPPPPYLPA 220 230 >>gi|81885191|sp|Q6P501.1|LAP4A_RAT RecName: Full=Lysoso (233 aa) initn: 1586 init1: 1586 opt: 1586 Z-score: 1890.1 bits: 357.3 E(): 1.4e-96 Smith-Waterman score: 1586; 99.571% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::::::::::: gi|818 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|818 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::::::::::::::: gi|818 VLPTYEMAVKIPEKEPPPPYLPA 220 230 >>gi|3122416|sp|Q60961.1|LAP4A_MOUSE RecName: Full=Lysos (233 aa) initn: 1576 init1: 1576 opt: 1576 Z-score: 1878.3 bits: 355.1 E(): 6.5e-96 Smith-Waterman score: 1576; 99.571% identity (99.571% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::: ::::::: gi|312 MVSMTFKRSRSDRFYSTRCCGCFHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::::::::::::::: gi|312 VLPTYEMAVKIPEKEPPPPYLPA 220 230 >>gi|75075710|sp|Q4R4I5.1|LAP4A_MACFA RecName: Full=Lyso (233 aa) initn: 1574 init1: 1574 opt: 1574 Z-score: 1875.9 bits: 354.6 E(): 8.8e-96 Smith-Waterman score: 1574; 98.283% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::::::::::: gi|750 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::..::::::::::::::::::::::::::::::::::.:::: gi|750 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::.:::::::::::: gi|750 VLPTYEMAVKMPEKEPPPPYLPA 220 230 >>gi|75043917|sp|Q6QRN8.1|LAP4A_BOVIN RecName: Full=Lyso (233 aa) initn: 1567 init1: 1567 opt: 1567 Z-score: 1867.6 bits: 353.1 E(): 2.6e-95 Smith-Waterman score: 1567; 97.425% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::::::::::: gi|750 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::..:::::::::::::::::::::::.::::::::::.:::: gi|750 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNMPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::.:::::::::.:: gi|750 VLPTYEMAVKMPEKEPPPPYIPA 220 230 >>gi|3122413|sp|Q15012.1|LAP4A_HUMAN RecName: Full=Lysos (233 aa) initn: 1567 init1: 1567 opt: 1567 Z-score: 1867.6 bits: 353.1 E(): 2.6e-95 Smith-Waterman score: 1567; 97.425% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI ::::.:::.::::::::::::::::::::: gi|312 MVSMSFKRNRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::..::::::::::::::::::::::::::::::::::.:::: gi|312 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::.:::::::::::: gi|312 VLPTYEMAVKMPEKEPPPPYLPA 220 230 >>gi|13111971|gb|AAH03158.1| Lysosomal protein transmemb (233 aa) initn: 1563 init1: 1563 opt: 1563 Z-score: 1862.8 bits: 352.2 E(): 4.7e-95 Smith-Waterman score: 1563; 96.996% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI ::::.:::.::::::::::::::::::::: gi|131 MVSMSFKRNRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 FIISSMLVYGSISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::..::::::::::::::::::::::::::::::::::.:::: gi|131 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::.:::::::::::: gi|131 VLPTYEMAVKMPEKEPPPPYLPA 220 230 >>gi|82074509|sp|Q5EI37.1|LAP4A_GECJA RecName: Full=Lyso (233 aa) initn: 1561 init1: 1561 opt: 1561 Z-score: 1860.4 bits: 351.8 E(): 6.4e-95 Smith-Waterman score: 1561; 96.996% identity (100.000% similar) in 233 aa overlap (41-273:1-233) 20 30 40 50 60 70 mKIAA0 GHRRRVVWVEPLGRKLLSGAWARTRPARFRMVSMTFKRSRSDRFYSTRCCGCCHVRTGTI :::::::::::::::::::::::::::::: gi|820 MVSMTFKRSRSDRFYSTRCCGCCHVRTGTI 10 20 30 80 90 100 110 120 130 mKIAA0 ILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|820 ILGTWYMVVNLLMAILLTVEVTHPNSVPAVNIQYEVIGNYYSSERMADNACVLFAVSVLM 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|820 FIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 DDLLALDSSCLLFIVLVFFVVFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFETPPQY :::::::::::::::::::..:::::::::::::::::::::::.::::::::::.:::: gi|820 DDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNMPEIAVYPAFEAPPQY 160 170 180 190 200 210 260 270 mKIAA0 VLPTYEMAVKIPEKEPPPPYLPA ::::::::::.:::::::::.:: gi|820 VLPTYEMAVKMPEKEPPPPYIPA 220 230 273 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:00:56 2009 done: Thu Mar 12 22:06:14 2009 Total Scan time: 744.000 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]