Comparison of KIAA cDNA sequences between mouse and human (KIAA0108)
<<Original sequence data>>
mouse mKIAA0108 (mpk01802) length: 1358 bp, CDS: 1 - 822
human KIAA0108 (ha00623) length: 1402 bp, CDS: 84 - 848
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 30 - 83 38 16 29.6
CDS: 84 - 851 693 74 9.6
3'UTR: 852 - 1416 412 125 23.3
amino acid
CDS: 84 - 851 239 16 6.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mpk01802 1 .............................GGCGGGCCAGAAGACGCGTCC 21
|||||| |||||||||||
ha00623 1 CGAAGAAGCTGGCAGGGGCACGAGCCGGGGGCGGGTTTGAAGACGCGTCG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
V E P R A E
mpk01802 22 TTTGGCTGTGGACACCGTCGTAGAGTCGTCTGGGTTGAACCGCTGGGCCG 71
|| || | |||| |||| | || ||| || ||| | || ||| |
ha00623 51 TTGGGTTTTGGAGGCCGTGAAACAGCCGTTTGAGTTTGGCTGC.GGGTGG 99
V W L R V E
101 ----+----*----+----*----+----*----+----*----+----* 150
S F C Q G P G R E R G P R G S M
mpk01802 72 AAAGCTTTTGTCAGGGGCCTGGGCGAGAACGAGGCCCGCGAGGTTCCGGA 121
| | | ||||||||||||| || | |||| ||||||||| | | | ||
ha00623 100 AGAACGTTTGTCAGGGGCCCGGCCAAGAAGGAGGCCCGCCTGTTAC..GA 147
N V C Q G P G Q E G G P P V T M
151 ----+----*----+----*----+----*----+----*----+----* 200
V S M T F K R S R S D R F Y S T
mpk01802 122 TGGTGTCCATGACTTTCAAACGGAGCCGCAGCGACCGGTTCTACAGCACC 171
|||||||||||| |||||| |||| |||||| ||||||||||||||||||
ha00623 148 TGGTGTCCATGAGTTTCAAGCGGAACCGCAGTGACCGGTTCTACAGCACC 197
V S M S F K R N R S D R F Y S T
201 ----+----*----+----*----+----*----+----*----+----* 250
R C C G C C H V R T G T I I L G T
mpk01802 172 CGGTGCTGCGGCTGTTGCCATGTCCGCACCGGGACGATCATCCTGGGGAC 221
||||||||||||||||||||||||||||||||||||||||||||||||||
ha00623 198 CGGTGCTGCGGCTGTTGCCATGTCCGCACCGGGACGATCATCCTGGGGAC 247
R C C G C C H V R T G T I I L G T
251 ----+----*----+----*----+----*----+----*----+----* 300
W Y M V V N L L M A I L L T V E V
mpk01802 222 CTGGTACATGGTGGTCAACCTGTTGATGGCCATTTTGCTGACCGTGGAGG 271
|||||||||||| || ||||| |||||||| ||||||||||| ||||| |
ha00623 248 CTGGTACATGGTAGTAAACCTATTGATGGCAATTTTGCTGACTGTGGAAG 297
W Y M V V N L L M A I L L T V E V
301 ----+----*----+----*----+----*----+----*----+----* 350
T H P N S M P A V N I Q Y E V I
mpk01802 272 TGACTCATCCAAATTCCATGCCAGCTGTCAACATTCAGTATGAAGTCATT 321
||||||||||||| |||||||||||||||||||||||||||||||||||
ha00623 298 TGACTCATCCAAACTCCATGCCAGCTGTCAACATTCAGTATGAAGTCATC 347
T H P N S M P A V N I Q Y E V I
351 ----+----*----+----*----+----*----+----*----+----* 400
G N Y Y S S E R M A D N A C V L F
mpk01802 322 GGTAATTACTATTCATCTGAGAGAATGGCTGATAATGCCTGCGTTCTTTT 371
|||||||||||||| |||||||||||||||||||||||||| ||||||||
ha00623 348 GGTAATTACTATTCGTCTGAGAGAATGGCTGATAATGCCTGTGTTCTTTT 397
G N Y Y S S E R M A D N A C V L F
401 ----+----*----+----*----+----*----+----*----+----* 450
A V S V L M F I I S S M L V Y G A
mpk01802 372 TGCCGTCTCTGTTCTTATGTTTATAATCAGTTCAATGCTGGTTTATGGAG 421
||||||||||||||||||||||||||||||||||||||||||||||||||
ha00623 398 TGCCGTCTCTGTTCTTATGTTTATAATCAGTTCAATGCTGGTTTATGGAG 447
A V S V L M F I I S S M L V Y G A
451 ----+----*----+----*----+----*----+----*----+----* 500
I S Y Q V G W L I P F F C Y R L
mpk01802 422 CCATTTCTTATCAAGTGGGCTGGCTGATTCCTTTCTTCTGCTACCGACTC 471
| ||||||||||||||||| ||||||||||| |||||||| ||||||||
ha00623 448 CAATTTCTTATCAAGTGGGTTGGCTGATTCCATTCTTCTGTTACCGACTT 497
I S Y Q V G W L I P F F C Y R L
501 ----+----*----+----*----+----*----+----*----+----* 550
F D F V L S C L V A I S S L T Y L
mpk01802 472 TTTGACTTCGTTCTCAGTTGTCTGGTGGCCATCAGTTCTCTCACTTACTT 521
||||||||||| |||||||| ||||| || || ||||||||||| || ||
ha00623 498 TTTGACTTCGTCCTCAGTTGCCTGGTTGCTATTAGTTCTCTCACCTATTT 547
F D F V L S C L V A I S S L T Y L
551 ----+----*----+----*----+----*----+----*----+----* 600
P R I K E Y L D Q L P D F P Y K D
mpk01802 522 GCCAAGAATCAAAGAATATCTGGATCAGTTGCCTGATTTCCCATACAAAG 571
||||||||||||||||||||||||||| | |||||||| || |||||||
ha00623 548 GCCAAGAATCAAAGAATATCTGGATCAACTACCTGATTTTCCCTACAAAG 597
P R I K E Y L D Q L P D F P Y K D
601 ----+----*----+----*----+----*----+----*----+----* 650
D L L A L D S S C L L F I V L V
mpk01802 572 ATGACCTCCTGGCATTGGACTCCAGCTGCCTCCTGTTCATCGTCCTTGTG 621
||||||||||||| |||||||||||||||||||||||||| || ||||||
ha00623 598 ATGACCTCCTGGCCTTGGACTCCAGCTGCCTCCTGTTCATTGTTCTTGTG 647
D L L A L D S S C L L F I V L V
651 ----+----*----+----*----+----*----+----*----+----* 700
F F V V F I I F K A Y L I N C V W
mpk01802 622 TTCTTTGTGGTATTCATCATTTTTAAGGCTTACCTAATCAATTGTGTTTG 671
||||||| |||||||||||||||||||||| ||||| || ||||||||
ha00623 648 TTCTTTGCCTTATTCATCATTTTTAAGGCTTATCTAATTAACTGTGTTTG 697
F F A L F I I F K A Y L I N C V W
701 ----+----*----+----*----+----*----+----*----+----* 750
N C Y K Y I N N R N V P E I A V Y
mpk01802 672 GAACTGCTACAAATACATCAACAACAGAAATGTGCCAGAGATTGCCGTGT 721
||||||||| ||||||||||||||| |||| ||||| |||||||| ||||
ha00623 698 GAACTGCTATAAATACATCAACAACCGAAACGTGCCGGAGATTGCTGTGT 747
N C Y K Y I N N R N V P E I A V Y
751 ----+----*----+----*----+----*----+----*----+----* 800
P A F E T P P Q Y V L P T Y E M
mpk01802 722 ACCCTGCCTTTGAAACACCTCCACAGTATGTTTTGCCAACCTATGAAATG 771
|||||||||||||| ||||||| ||||| |||||||||||||||||||||
ha00623 748 ACCCTGCCTTTGAAGCACCTCCTCAGTACGTTTTGCCAACCTATGAAATG 797
P A F E A P P Q Y V L P T Y E M
801 ----+----*----+----*----+----*----+----*----+----* 850
A V K I P E K E P P P P Y L P A *
mpk01802 772 GCTGTGAAGATTCCTGAGAAAGAGCCACCACCTCCTTACCTGCCTGCCTG 821
|| ||||| || ||||| ||||| ||||||||||||||| | ||||||||
ha00623 798 GCCGTGAAAATGCCTGAAAAAGAACCACCACCTCCTTACTTACCTGCCTG 847
A V K M P E K E P P P P Y L P A *
851 ----+----*----+----*----+----*----+----*----+----* 900
mpk01802 822 AGGACATTCTGCC.TTGTCAATAAAGCCTATACCAGCTTCTCGTCTTGTT 870
| || |||||||| ||| ||||||| ||||||||||||| | || |||||
ha00623 848 AAGAAATTCTGCCTTTGACAATAAATCCTATACCAGCTTTTTGT.TTGTT 896
901 ----+----*----+----*----+----*----+----*----+----* 950
mpk01802 871 TATTTTACAGAAAGCTGCAGTGCGGGCCTC.TCAGACTTGTTTGATAGAA 919
||| |||||||| |||||| | | || ||| ||| |||||||||||| ||
ha00623 897 TATGTTACAGAATGCTGCAATTCAGGGCTCTTCAAACTTGTTTGATATAA 946
951 ----+----*----+----*----+----*----+----*----+----* 1000
mpk01802 920 AGTACACTGTC..TTGTCTGAGCATTTATTTTCAAACACTAAGGAGCTTT 967
| || |||| |||| | ||||||||||||||||||||||||||||||
ha00623 947 AATATGTTGTCTTTTGTTTAAGCATTTATTTTCAAACACTAAGGAGCTTT 996
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpk01802 968 TGGACATTTATTAAA.........AACTTTTTGTTAAG..TATCACATTT 1006
| ||||| | ||||| ||||||||||| | | ||||||
ha00623 997 TTGACATCTGTTAAACGTCTTTTTGTTTTTTTGTTAAGTCTTTTACATTT 1046
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpk01802 1007 TAGAGACTTTTTGAAGACAATCTAGATTAAGCAAGAGCCAAGTGCCATTG 1056
|| | | |||||||||||||||||| |||||||||||| |||||||||||
ha00623 1047 TA.ATAGTTTTTGAAGACAATCTAGGTTAAGCAAGAGCAAAGTGCCATTG 1095
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpk01802 1057 TTAGCCTTTAGCTGAGGGTATGGGGGGGAGGG........GTCTCCATGT 1098
|| ||||||| || ||| || |||| | | |||
ha00623 1096 TTTGCCTTTAATTGGGGGGTGGGAAGGGAAAGAGGGTACTTGCCACATAG 1145
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpk01802 1099 TTTCTTTTTTAACTTTGCACTTTCTTTGTATAATAATAGTTTATGTTTTG 1148
|||| |||||||| |||||||||||| |||||| || |||
ha00623 1146 TTTCCTTTTTAAC..TGCACTTTCTTTATATAAT....CGTTTGCATTTT 1189
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpk01802 1149 GATGTTTGGTGCCCTGAGTAGTTTCCGG.GGCGTGACTACAGTGTTGAGG 1197
| | ||| | ||||||||| |||| || | ||||| | | || ||
ha00623 1190 GTTACTTGCTACCCTGAGTACTTTCAGGAAGACTGACTTAAATATTCGGG 1239
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpk01802 1198 ATGAATA...GGTTGGGTATAACACCTGCAGTTTCCAGCTCTATGAAACA 1244
||| || ||||||||||| | ||| | ||| || || | |
ha00623 1240 GTGAGTAAGTAGTTGGGTATAAGATCTGAACTTTTCATCT.....GCAGA 1284
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpk01802 1245 GGAGAGAGAGAGAAATAGCAGTTTGACTTGACTGTGGAAGATGATGGTTG 1294
|| ||| | | | | || | |||||||||||||||||||||||||||
ha00623 1285 GGCAAGAAAAATATTTGACATTGTGACTTGACTGTGGAAGATGATGGTTG 1334
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpk01802 1295 CATGCTTCTCATTTG..TACGTTTCCATCTTTGTGATAAACCGCTTTAAT 1342
|||| |||| |||| || ||||||||||||||||||| | ||||||
ha00623 1335 CATGTTTCTAGTTTGTATATGTTTCCATCTTTGTGATAAGATGATTTAAT 1384
1401 ----+----*----+--- 1418
mpk01802 1343 AAAGCTCATAAATTTT.. 1358
||| ||| | || |
ha00623 1385 AAATCTCTTTAAATACTT 1402