FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0111.ptfa, 410 aa vs ./tmplib.26680 library 1768607 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.4730+/-0.00383; mu= 13.3914+/- 0.256 mean_var=71.4854+/-16.548, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1517 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0801 ( 1078 res) mpm05148 (1078) 668 156 1e-38 mKIAA1595 ( 615 res) mpj03292 ( 615) 360 88 1.4e-18 mKIAA0928 ( 1475 res) mpm06003 (1475) 149 43 0.0002 >>mKIAA0801 ( 1078 res) mpm05148 (1078 aa) initn: 629 init1: 400 opt: 668 Z-score: 787.3 bits: 156.0 E(): 1e-38 Smith-Waterman score: 668; 31.367% identity (32.143% ungapped) in 373 aa overlap (43-409:429-798) 20 30 40 50 60 70 mKIAA0 RKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQII :. .: .. .:.:::. :: .:: :. mKIAA0 EEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM 400 410 420 430 440 450 80 90 100 110 120 mKIAA0 KGRDVIAQSQSGTGKTATFSVSVLQ-CLDIQVRETQ----ALILAPTRELAVQIQKGLLA .:::.:. ...:.::: .: . ... .: . : :.:..::::::.:: : mKIAA0 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKK 460 470 480 490 500 510 130 140 150 160 170 180 mKIAA0 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE .. .... :::...:.: .: : .... ::::..::. : ..:.. .: mKIAA0 FSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGKSRVFYYLF--S 520 530 540 550 560 570 190 200 210 220 230 240 mKIAA0 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL .:. : : . . : :.:..:::.:. . .. .... ::.. : .. mKIAA0 LLFVLDMIFVEADLRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC 580 590 600 610 620 630 250 260 270 280 290 300 mKIAA0 EGIKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSM ..: ...: :: :: : .: . ...:: . ....: : . . .:.. :. mKIAA0 SDVEQQVIVIE-EEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 640 650 660 670 680 690 310 320 330 340 350 360 mKIAA0 HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGR :: . : .:.::...:..:. ..:..:.: :::::: .. :..::. ::. : :.:: :: mKIAA0 HGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGR 700 710 720 730 740 750 370 380 390 400 410 mKIAA0 SGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI .:: : :: : .:. .:. : :: . . .: .. : mKIAA0 TGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKK 760 770 780 790 800 810 mKIAA0 SSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKD 820 830 840 850 860 870 >>mKIAA1595 ( 615 res) mpj03292 (615 aa) initn: 565 init1: 210 opt: 360 Z-score: 426.0 bits: 88.3 E(): 1.4e-18 Smith-Waterman score: 583; 30.168% identity (32.143% ungapped) in 358 aa overlap (44-380:31-387) 20 30 40 50 60 70 mKIAA0 KRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIK :. .: .. :: . . .:. .: ..: mKIAA1 QRCGRLKPAENRGRAMEHVTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMK 10 20 30 40 50 60 80 90 100 110 120 mKIAA0 GRDVIAQSQSGTGKTATFSVSVLQCL---DIQVRETQ--ALILAPTRELAVQIQKGLLAL ..:: :.. .:.::: .: . .:. : . .....: :....::::::.::.. : . mKIAA1 NKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHF 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 GDYMNVQCHAC-IGGTNVGEDIRKL-DYGQHVVAGTPGRVFDMIRRRS----LRT--RAI .. . ::: : :::.... ..: .....::::. ::.::.. : . ... mKIAA1 TKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSL 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV .:::::::..:. ::. .: . ..:: .. :.::: .:. ... . .:.:: : mKIAA1 DVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISV 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 KRDELTLEGIKQFFVAVE------REEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTE :. .. . .. .: . . ::. : . . . ..: .: :.. . mKIAA1 KEKGVAASSTQKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGK 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 KMRE--ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYD .. . . .:: : : :..:. :::. : .:. ::: :::.:.:.:. ...:: mKIAA1 ALEALLKKVKILCIHGKMKYK-RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYD 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 LPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :.: ..:: ::..: :. : :. :. mKIAA1 PPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLL 360 370 380 390 400 410 >>mKIAA0928 ( 1475 res) mpm06003 (1475 aa) initn: 125 init1: 125 opt: 149 Z-score: 171.8 bits: 42.6 E(): 0.0002 Smith-Waterman score: 149; 27.059% identity (28.750% ungapped) in 85 aa overlap (313-397:58-137) 290 300 310 320 330 340 mKIAA0 CNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDV ...: ....::. . .::.:.: .:.:. mKIAA0 PELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDI 30 40 50 60 70 80 350 360 370 380 390 400 mKIAA0 PQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEM :. .:.. .:::.. . :.. ::. : .. :.: : ....:. .: mKIAA0 PKCNLVVRFDLPTEYRSYVQSKGRA----RAPIS-NYVMLADTDKIKSFEEDLKTYKAIE 90 100 110 120 130 140 410 mKIAA0 PMNVADLI mKIAA0 KILRNKCSKSADGAEADVHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPS 150 160 170 180 190 200 410 residues in 1 query sequences 1768607 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:12:26 2006 done: Mon Mar 27 10:12:27 2006 Scan time: 0.640 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]