# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpk01295.fasta.nr -Q ../query/mKIAA0111.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0111, 410 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7904372 sequences Expectation_n fit: rho(ln(x))= 5.1777+/-0.000182; mu= 10.2407+/- 0.010 mean_var=69.5033+/-13.563, 0's: 46 Z-trim: 161 B-trim: 412 in 2/66 Lambda= 0.153841 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|42560197|sp|Q91VC3.3|IF4A3_MOUSE RecName: Full= ( 411) 2654 598.0 1.2e-168 gi|109825494|sp|Q2NL22.3|IF4A3_BOVIN RecName: Full ( 411) 2646 596.3 4.3e-168 gi|26344810|dbj|BAC36054.1| unnamed protein produc ( 411) 2645 596.1 5e-168 gi|73964736|ref|XP_533130.2| PREDICTED: similar to ( 411) 2645 596.1 5e-168 gi|74142079|dbj|BAE41100.1| unnamed protein produc ( 411) 2645 596.1 5e-168 gi|114794876|pdb|2J0Q|A Chain A, The Crystal Struc ( 410) 2641 595.2 9.2e-168 gi|20532400|sp|P38919.4|IF4A3_HUMAN RecName: Full= ( 411) 2641 595.2 9.2e-168 gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 ( 412) 2641 595.2 9.2e-168 gi|114794629|pdb|2HYI|C Chain C, Structure Of The ( 413) 2641 595.2 9.2e-168 gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full= ( 411) 2631 592.9 4.3e-167 gi|114670845|ref|XP_511724.2| PREDICTED: similar t ( 543) 2631 593.0 5.3e-167 gi|496902|emb|CAA56074.1| translation initiation f ( 411) 2624 591.4 1.3e-166 gi|197128100|gb|ACH44598.1| putative DEAD box poly ( 410) 2606 587.4 2e-165 gi|53127756|emb|CAG31207.1| hypothetical protein [ ( 412) 2606 587.4 2e-165 gi|51712358|ref|XP_485792.1| PREDICTED: hypothetic ( 411) 2593 584.5 1.5e-164 gi|83021886|ref|XP_923606.1| PREDICTED: similar to ( 411) 2578 581.2 1.5e-163 gi|163916017|gb|AAI57178.1| LOC100135173 protein [ ( 415) 2575 580.5 2.4e-163 gi|213624377|gb|AAI71014.1| Hypothetical protein L ( 415) 2575 580.5 2.4e-163 gi|218505708|ref|NP_001136206.1| predicted gene, E ( 411) 2573 580.1 3.2e-163 gi|54311504|gb|AAH84859.1| Unknown (protein for MG ( 415) 2562 577.6 1.8e-162 gi|187957004|gb|AAI58084.1| EG434080 protein [Mus ( 411) 2559 577.0 2.8e-162 gi|28277876|gb|AAH45939.1| Eukaryotic translation ( 406) 2540 572.7 5.1e-161 gi|197631985|gb|ACH70716.1| eukaryotic translation ( 406) 2539 572.5 5.9e-161 gi|47209111|emb|CAF90069.1| unnamed protein produc ( 415) 2536 571.9 9.6e-161 gi|114794619|pdb|2HXY|A Chain A, Crystal Structure ( 391) 2530 570.5 2.3e-160 gi|2443810|gb|AAB71410.1| eukaryotic translation i ( 414) 2529 570.3 2.8e-160 gi|126306068|ref|XP_001381369.1| PREDICTED: simila ( 404) 2461 555.2 9.6e-156 gi|116668332|pdb|2J0U|A Chain A, The Crystal Struc ( 374) 2440 550.5 2.3e-154 gi|116668333|pdb|2J0U|B Chain B, The Crystal Struc ( 374) 2425 547.2 2.3e-153 gi|210111452|gb|EEA59251.1| hypothetical protein B ( 403) 2403 542.3 7.2e-152 gi|198423899|ref|XP_002126471.1| PREDICTED: simila ( 409) 2378 536.8 3.4e-150 gi|215507887|gb|EEC17341.1| DEAD box ATP-dependent ( 402) 2377 536.6 3.9e-150 gi|210087031|gb|EEA35424.1| hypothetical protein B ( 398) 2375 536.1 5.3e-150 gi|156227658|gb|EDO48460.1| predicted protein [Nem ( 407) 2355 531.7 1.2e-148 gi|48136057|ref|XP_393356.1| PREDICTED: similar to ( 403) 2349 530.3 2.9e-148 gi|116129059|gb|EAA08469.4| AGAP003089-PA [Anophel ( 400) 2339 528.1 1.4e-147 gi|110376569|gb|ABG73410.1| eIF4AIII protein [Bomb ( 405) 2335 527.2 2.5e-147 gi|212518164|gb|EEB19956.1| DEAD box ATP-dependent ( 407) 2334 527.0 3e-147 gi|108869079|gb|EAT33304.1| DEAD box ATP-dependent ( 400) 2328 525.7 7.3e-147 gi|190627620|gb|EDV43144.1| GF18341 [Drosophila an ( 399) 2322 524.4 1.8e-146 gi|194169476|gb|EDW84377.1| GK13178 [Drosophila wi ( 395) 2319 523.7 2.9e-146 gi|7299019|gb|AAF54221.1| eIF4AIII [Drosophila mel ( 399) 2315 522.8 5.4e-146 gi|194121003|gb|EDW43046.1| GM23722 [Drosophila se ( 399) 2314 522.6 6.3e-146 gi|54638586|gb|EAL27988.1| GA20384 [Drosophila pse ( 399) 2313 522.4 7.4e-146 gi|31746585|gb|AAK29954.2| Hypothetical protein Y6 ( 399) 2313 522.4 7.4e-146 gi|2773184|gb|AAB96704.1| Hypothetical protein F33 ( 399) 2311 521.9 1e-145 gi|187035232|emb|CAP25672.1| Hypothetical protein ( 400) 2310 521.7 1.2e-145 gi|19528517|gb|AAL90373.1| RE50350p [Drosophila me ( 399) 2309 521.5 1.4e-145 gi|190580170|gb|EDV20255.1| DEAD box ATP-dependent ( 401) 2304 520.4 3e-145 gi|91087239|ref|XP_975511.1| PREDICTED: similar to ( 404) 2297 518.8 8.7e-145 >>gi|42560197|sp|Q91VC3.3|IF4A3_MOUSE RecName: Full=Euka (411 aa) initn: 2654 init1: 2654 opt: 2654 Z-score: 3183.8 bits: 598.0 E(): 1.2e-168 Smith-Waterman score: 2654; 100.000% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 MAANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|109825494|sp|Q2NL22.3|IF4A3_BOVIN RecName: Full=Euk (411 aa) initn: 2646 init1: 2646 opt: 2646 Z-score: 3174.2 bits: 596.3 E(): 4.3e-168 Smith-Waterman score: 2646; 99.512% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|26344810|dbj|BAC36054.1| unnamed protein product [M (411 aa) initn: 2645 init1: 2645 opt: 2645 Z-score: 3173.0 bits: 596.1 E(): 5e-168 Smith-Waterman score: 2645; 99.756% identity (99.756% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK ::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|263 MAANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLRGDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|73964736|ref|XP_533130.2| PREDICTED: similar to DEA (411 aa) initn: 2645 init1: 2645 opt: 2645 Z-score: 3173.0 bits: 596.1 E(): 5e-168 Smith-Waterman score: 2645; 99.512% identity (99.756% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAAAATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|739 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|74142079|dbj|BAE41100.1| unnamed protein product [M (411 aa) initn: 2645 init1: 2645 opt: 2645 Z-score: 3173.0 bits: 596.1 E(): 5e-168 Smith-Waterman score: 2645; 99.756% identity (99.756% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MAANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|741 IKMLVLDEADEMLNKGFKELIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|114794876|pdb|2J0Q|A Chain A, The Crystal Structure (410 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 3168.2 bits: 595.2 E(): 9.2e-168 Smith-Waterman score: 2641; 99.268% identity (100.000% similar) in 410 aa overlap (1-410:1-410) 10 20 30 40 50 60 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP :..::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA0 SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQ ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|114 SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA0 IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA0 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA0 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA0 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|20532400|sp|P38919.4|IF4A3_HUMAN RecName: Full=Euka (411 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 3168.2 bits: 595.2 E(): 9.2e-168 Smith-Waterman score: 2641; 99.268% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK :..:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|205 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 >>gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 [sy (412 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 3168.2 bits: 595.2 E(): 9.2e-168 Smith-Waterman score: 2641; 99.268% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK :..:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|606 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLIL 370 380 390 400 410 >>gi|114794629|pdb|2HYI|C Chain C, Structure Of The Huma (413 aa) initn: 2641 init1: 2641 opt: 2641 Z-score: 3168.2 bits: 595.2 E(): 9.2e-168 Smith-Waterman score: 2641; 99.268% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK :..:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|114 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLILE 370 380 390 400 410 >>gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full=Euka (411 aa) initn: 2631 init1: 2631 opt: 2631 Z-score: 3156.2 bits: 592.9 E(): 4.3e-167 Smith-Waterman score: 2631; 98.780% identity (100.000% similar) in 410 aa overlap (1-410:2-411) 10 20 30 40 50 mKIAA0 AANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK :..:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV :::::::::::::::::::::::::::::::::.::::::::::::::::::::.::::: gi|736 PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAV 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 QIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 370 380 390 400 410 410 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 22:18:24 2009 done: Thu Mar 12 22:24:56 2009 Total Scan time: 887.070 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]