# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpk00325.fasta.nr -Q ../query/mKIAA1974.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1974, 149 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920618 sequences Expectation_n fit: rho(ln(x))= 4.6110+/-0.000177; mu= 9.1073+/- 0.010 mean_var=57.0706+/-11.107, 0's: 42 Z-trim: 50 B-trim: 0 in 0/66 Lambda= 0.169773 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|51873860|gb|AAH80707.1| Npepl1 protein [Mus mus ( 505) 1021 257.8 1.4e-66 gi|74214094|dbj|BAE29459.1| unnamed protein produc ( 524) 1021 257.9 1.5e-66 gi|74215249|dbj|BAE41846.1| unnamed protein produc ( 524) 1021 257.9 1.5e-66 gi|68565890|sp|Q6NSR8.1|PEPL1_MOUSE RecName: Full= ( 524) 1021 257.9 1.5e-66 gi|148674714|gb|EDL06661.1| aminopeptidase-like 1, ( 543) 1021 257.9 1.5e-66 gi|74217765|dbj|BAE33601.1| unnamed protein produc ( 524) 1020 257.6 1.7e-66 gi|149030004|gb|EDL85096.1| aminopeptidase-like 1 ( 412) 994 251.2 1.2e-64 gi|10432867|dbj|BAB13861.1| unnamed protein produc ( 411) 979 247.5 1.5e-63 gi|119595883|gb|EAW75477.1| aminopeptidase-like 1, ( 411) 979 247.5 1.5e-63 gi|119595885|gb|EAW75479.1| aminopeptidase-like 1, ( 475) 979 247.5 1.7e-63 gi|68847034|sp|Q8NDH3.3|PEPL1_HUMAN RecName: Full= ( 523) 979 247.6 1.8e-63 gi|189055065|dbj|BAG38049.1| unnamed protein produ ( 411) 977 247.0 2.1e-63 gi|55731159|emb|CAH92294.1| hypothetical protein [ ( 522) 977 247.1 2.6e-63 gi|68565875|sp|Q5R7G6.2|PEPL1_PONAB RecName: Full= ( 523) 977 247.1 2.6e-63 gi|62897749|dbj|BAD96814.1| aminopeptidase-like 1 ( 523) 977 247.1 2.6e-63 gi|194387330|dbj|BAG60029.1| unnamed protein produ ( 475) 968 244.8 1.1e-62 gi|74356311|gb|AAI04624.1| Aminopeptidase-like 1 [ ( 523) 965 244.1 2e-62 gi|194224584|ref|XP_001490199.2| PREDICTED: aminop ( 507) 954 241.4 1.3e-61 gi|147223400|emb|CAN13197.1| aminopeptidase-like 1 ( 523) 943 238.8 8.3e-61 gi|149639882|ref|XP_001511141.1| PREDICTED: simila ( 548) 922 233.6 3e-59 gi|224152172|ref|XP_002198722.1| PREDICTED: simila ( 223) 888 225.0 4.8e-57 gi|118100855|ref|XP_417486.2| PREDICTED: similar t ( 523) 889 225.5 8e-57 gi|114682876|ref|XP_525369.2| PREDICTED: aminopept ( 359) 886 224.7 9.9e-57 gi|224078499|ref|XP_002195599.1| PREDICTED: simila ( 656) 888 225.4 1.1e-56 gi|126302771|ref|XP_001368757.1| PREDICTED: simila ( 521) 878 222.8 5.1e-56 gi|66792572|gb|AAH96511.1| Hypothetical protein mg ( 522) 862 218.9 7.8e-55 gi|62825986|gb|AAH94201.1| MGC115168 protein [Xeno ( 521) 852 216.5 4.2e-54 gi|116063396|gb|AAI23159.1| Lap-1 protein [Xenopus ( 521) 847 215.2 9.9e-54 gi|209154906|gb|ACI33685.1| Probable aminopeptidas ( 525) 815 207.4 2.3e-51 gi|160774192|gb|AAI55149.1| Aminopeptidase-like 1 ( 525) 804 204.7 1.5e-50 gi|62531269|gb|AAH93321.1| Aminopeptidase-like 1 [ ( 525) 795 202.5 6.8e-50 gi|47222866|emb|CAF96533.1| unnamed protein produc ( 542) 791 201.5 1.4e-49 gi|193894396|gb|EDV93262.1| GH19202 [Drosophila gr ( 558) 643 165.3 1.1e-38 gi|194183554|gb|EDW97165.1| GE24479 [Drosophila ya ( 657) 637 163.9 3.6e-38 gi|6942155|gb|AAF32329.1|AF218812_1 putative cytop ( 558) 636 163.6 3.8e-38 gi|25009916|gb|AAN71126.1| AT31511p [Drosophila me ( 655) 636 163.6 4.3e-38 gi|190652043|gb|EDV49298.1| GG17089 [Drosophila er ( 656) 636 163.6 4.3e-38 gi|190627117|gb|EDV42641.1| GF18094 [Drosophila an ( 564) 634 163.1 5.3e-38 gi|220903066|gb|AAF54874.3| granny smith, isoform ( 533) 632 162.6 7.2e-38 gi|6942153|gb|AAF32328.1|AF218811_1 putative cytop ( 558) 632 162.6 7.4e-38 gi|194166823|gb|EDW81724.1| GK10859 [Drosophila wi ( 562) 629 161.9 1.2e-37 gi|194142919|gb|EDW59322.1| GJ10808 [Drosophila vi ( 555) 628 161.6 1.5e-37 gi|91094127|ref|XP_968492.1| PREDICTED: similar to ( 519) 627 161.4 1.6e-37 gi|198131647|gb|EAL27656.2| GA20276 [Drosophila ps ( 551) 626 161.1 2e-37 gi|194102812|gb|EDW24855.1| GL23157 [Drosophila pe ( 551) 626 161.1 2e-37 gi|215510326|gb|EEC19779.1| leucine aminopeptidase ( 529) 625 160.9 2.3e-37 gi|193915531|gb|EDW14398.1| GI24235 [Drosophila mo ( 529) 625 160.9 2.3e-37 gi|73992641|ref|XP_854772.1| PREDICTED: similar to ( 95) 611 156.9 6.6e-37 gi|198437477|ref|XP_002131747.1| PREDICTED: simila ( 532) 598 154.3 2.3e-35 gi|221110714|ref|XP_002157667.1| PREDICTED: simila ( 346) 582 150.2 2.5e-34 >>gi|51873860|gb|AAH80707.1| Npepl1 protein [Mus musculu (505 aa) initn: 1021 init1: 1021 opt: 1021 Z-score: 1351.5 bits: 257.8 E(): 1.4e-66 Smith-Waterman score: 1021; 100.000% identity (100.000% similar) in 149 aa overlap (1-149:357-505) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|518 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 330 340 350 360 370 380 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 390 400 410 420 430 440 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 450 460 470 480 490 500 >>gi|74214094|dbj|BAE29459.1| unnamed protein product [M (524 aa) initn: 1021 init1: 1021 opt: 1021 Z-score: 1351.2 bits: 257.9 E(): 1.5e-66 Smith-Waterman score: 1021; 100.000% identity (100.000% similar) in 149 aa overlap (1-149:376-524) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|742 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 410 420 430 440 450 460 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 470 480 490 500 510 520 >>gi|74215249|dbj|BAE41846.1| unnamed protein product [M (524 aa) initn: 1021 init1: 1021 opt: 1021 Z-score: 1351.2 bits: 257.9 E(): 1.5e-66 Smith-Waterman score: 1021; 100.000% identity (100.000% similar) in 149 aa overlap (1-149:376-524) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|742 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 410 420 430 440 450 460 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 470 480 490 500 510 520 >>gi|68565890|sp|Q6NSR8.1|PEPL1_MOUSE RecName: Full=Prob (524 aa) initn: 1021 init1: 1021 opt: 1021 Z-score: 1351.2 bits: 257.9 E(): 1.5e-66 Smith-Waterman score: 1021; 100.000% identity (100.000% similar) in 149 aa overlap (1-149:376-524) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|685 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 410 420 430 440 450 460 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 470 480 490 500 510 520 >>gi|148674714|gb|EDL06661.1| aminopeptidase-like 1, iso (543 aa) initn: 1021 init1: 1021 opt: 1021 Z-score: 1351.0 bits: 257.9 E(): 1.5e-66 Smith-Waterman score: 1021; 100.000% identity (100.000% similar) in 149 aa overlap (1-149:395-543) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|148 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 370 380 390 400 410 420 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 430 440 450 460 470 480 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 490 500 510 520 530 540 >>gi|74217765|dbj|BAE33601.1| unnamed protein product [M (524 aa) initn: 1020 init1: 1020 opt: 1020 Z-score: 1349.9 bits: 257.6 E(): 1.7e-66 Smith-Waterman score: 1020; 99.329% identity (100.000% similar) in 149 aa overlap (1-149:376-524) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :.:::::::::::::::::::::::::::: gi|742 RLVLADGVSYACKDLGADIIVDMATLTGAQGVATGKYHAAVLTNSAEWEAACVKAGRKCG 350 360 370 380 390 400 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 410 420 430 440 450 460 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV 470 480 490 500 510 520 >>gi|149030004|gb|EDL85096.1| aminopeptidase-like 1 (pre (412 aa) initn: 994 init1: 994 opt: 994 Z-score: 1317.0 bits: 251.2 E(): 1.2e-64 Smith-Waterman score: 994; 97.315% identity (99.329% similar) in 149 aa overlap (1-149:264-412) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG ::::::::::::::::::::::::::.::: gi|149 RLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGQKCG 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 300 310 320 330 340 350 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::::::::::: :..:::::::::: gi|149 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEDDSVGRDSKRRRLV 360 370 380 390 400 410 >>gi|10432867|dbj|BAB13861.1| unnamed protein product [H (411 aa) initn: 928 init1: 928 opt: 979 Z-score: 1297.1 bits: 247.5 E(): 1.5e-63 Smith-Waterman score: 979; 96.644% identity (98.658% similar) in 149 aa overlap (1-149:264-411) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|104 RLVLADGVSYACKDLGADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 300 310 320 330 340 350 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::: ::::..::: .:::::::::: gi|104 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLGCEVDVEEGD-LGRDSKRRRLV 360 370 380 390 400 410 >>gi|119595883|gb|EAW75477.1| aminopeptidase-like 1, iso (411 aa) initn: 928 init1: 928 opt: 979 Z-score: 1297.1 bits: 247.5 E(): 1.5e-63 Smith-Waterman score: 979; 96.644% identity (98.658% similar) in 149 aa overlap (1-149:264-411) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|119 RLVLADGVSYACKDLGADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 300 310 320 330 340 350 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::: ::::..::: .:::::::::: gi|119 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLGCEVDVEEGD-LGRDSKRRRLV 360 370 380 390 400 410 >>gi|119595885|gb|EAW75479.1| aminopeptidase-like 1, iso (475 aa) initn: 928 init1: 928 opt: 979 Z-score: 1296.2 bits: 247.5 E(): 1.7e-63 Smith-Waterman score: 979; 96.644% identity (98.658% similar) in 149 aa overlap (1-149:328-475) 10 20 30 mKIAA1 GIATGKYHAAVLTNSAEWEAACVKAGRKCG :::::::::::::::::::::::::::::: gi|119 RLVLADGVSYACKDLGADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCG 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA1 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDI 360 370 380 390 400 410 100 110 120 130 140 mKIAA1 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDAQEGDNMGRDSKRRRLV ::::::::::::::::::::::::::::::::::::: ::::..::: .:::::::::: gi|119 AAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLGCEVDVEEGD-LGRDSKRRRLV 420 430 440 450 460 470 149 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 15:04:25 2009 done: Mon Mar 16 15:08:33 2009 Total Scan time: 598.500 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]