Comparison of KIAA cDNA sequences between mouse and human (KIAA1933)

<<Original sequence data>>

mouse  mKIAA1933 (mpj03948)     length:   2272 bp, CDS:   106 -  2229
human   KIAA1933  (fk00541)     length:   3567 bp, CDS:   701 -  2203

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     72 -   700     139      149      51.7
  CDS:    701 -  2647    1254      251      16.7
3'UTR:   2648 -  3668      32       12      27.3

amino acid

  CDS:    701 -  2647     426       75      15.0
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mpj03948     1 .................................................. 1
                                                                 
fk00541      1 CTCTGAGTTAGAGTCGGTAAAGGAAAACAAGCCATACATATTGCAGCAGA 50

            51 ----+----*----+----*----+----*----+----*----+----* 100
mpj03948     1 .....................GGCAAAATGGCCGCGGGAGTGGCGGCGAG 29
                                    ||| |    || | ||||| |   |  ||
fk00541     51 GCGGCTTTAACACAAGGAGCTGGCTACCCAGCTGTGGGAGGGCTAGAAAG 100

           101 ----+----*----+----*----+----*----+----*----+----* 150
mpj03948    30 TGGATCGCTTCCC.......................ACAGCGGGCATTAT 56
                  || |   | |                        ||| | ||| |  
fk00541    101 CAAATGGGAACGCTGAGTAACCTAACAGTAGAGATTGCAGGGAGCAGTTA 150

           151 ----+----*----+----*----+----*----+----*----+----* 200
mpj03948    57 AATTGATTAGGTTTCTGATATCAA.......................... 80
                 |||  ||||  |  || |  ||                          
fk00541    151 CCTTGCCTAGGGCTGAGAAACTAAACGAGAAGATTAGGATTTCCAGAAGC 200

           201 ----+----*----+----*----+----*----+----*----+----* 250
mpj03948    81 .................................................. 81
                                                                 
fk00541    201 CACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCA 250

           251 ----+----*----+----*----+----*----+----*----+----* 300
mpj03948    81 .......................GATATCTTCCTAAGAAGTAAATTAACA 107
                                      | |||      |    | ||| |   |
fk00541    251 GCTCTGAGGGGCCCAAGGAGCTGGTTATGGGATCATTGGGAAAAGTTGGA 300

           301 ----+----*----+----*----+----*----+----*----+----* 350
mpj03948   108 AGCCTCACGTTTCTGTGCAAACACTGAGGAGCCAGTTGGCACC....... 150
                 |  ||     |||  |  ||   ||||| || | ||  | |       
fk00541    301 GTCTGCAATCAACTGCCCCTACCGAGAGGACCCTGATGAGAACAGCAGCA 350

           351 ----+----*----+----*----+----*----+----*----+----* 400
mpj03948   151 .................................................. 151
                                                                 
fk00541    351 TGCAGAAAGGAGCAAGCCTGCTCTGTCCTCCTACCTTCCAGTCGCCCTCT 400

           401 ----+----*----+----*----+----*----+----*----+----* 450
mpj03948   151 .........................................ATGAAGGTC 159
                                                        |  | ||| 
fk00541    401 TGGTCCCCCTTTTGGCTGTACCTAACAGTTGGAAAAAGGAGAACATGGTT 450

           451 ----+----*----+----*----+----*----+----*----+----* 500
mpj03948   160 TTCTGTGGCCGTGCCAATCCTACCACGGGATCCCTG.GAGTGGCTGGAGG 208
               | | | |  |  ||    | ||  |  ||||    | | | |  ||||| 
fk00541    451 TGCAGGGCTCTGGCATCACTTAGTAGAGGATAGAAGAGTGAGTGTGGAGC 500

           501 ----+----*----+----*----+----*----+----*----+----* 550
mpj03948   209 AGG...............ATGAACACTATGATTACCACCAGGAGATTGCC 243
               |||               | |  ||    | | ||   || ||  |  ||
fk00541    501 AGGGACAGTCGCTTAATAAAGGGCAAGGGGCTGACTCACAAGACCTGCCC 550

           551 ----+----*----+----*----+----*----+----*----+----* 600
mpj03948   244 AGGTCATCCTATGCCGACATGCTACATGACAAAGA............... 278
               |  ||| ||   || |   ||| |   | || | |               
fk00541    551 AACTCAGCCAGAGCTGTTCTGCCAGGGGCCAGAAAGGCCATAGGGCCCTG 600

           601 ----+----*----+----*----+----*----+----*----+----* 650
mpj03948   279 .................................................. 279
                                                                 
fk00541    601 ACTTGCACTGCCACTGCCAGCTGTGACTCTAGAACTTTGCAAAGCACCTT 650

           651 ----+----*----+----*----+----*----+----*----+----* 700
mpj03948   279 ..............................................CAGA 282
                                                                 
fk00541    651 TCCACTTACTTATAATAACTGGTAGTAAGTGACGGCCATGTCTTCCTTAG 700

           701 ----+----*----+----*----+----*----+----*----+----* 750
               N  I  K  Y  Y  Q  G  I  R  A  A  V  S  R  V  K  D 
mpj03948   283 AATATAAAATACTACCAGGGTATCCGGGCAGCTGTGAGCAGGGTGAAAGA 332
               ||| ||||||||||||| ||||||||||| || |||||||||||||| ||
fk00541    701 AATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGA 750
               N  V  K  Y  Y  Q  G  I  R  A  A  V  S  R  V  K  D 

           751 ----+----*----+----*----+----*----+----*----+----* 800
                R  G  Q  K  A  L  V  L  D  I  G  T  G  T  G  L  L
mpj03948   333 CAGAGGACAGAAGGCCTTGGTTCTTGACATTGGCACTGGCACAGGCCTCT 382
               |||||||||||||||||||||||| ||||||||||||||||| || ||||
fk00541    751 CAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT 800
                R  G  Q  K  A  L  V  L  D  I  G  T  G  T  G  L  L

           801 ----+----*----+----*----+----*----+----*----+----* 850
                 S  M  M  A  V  T  A  G  A  D  F  C  Y  A  I  E  
mpj03948   383 TGTCAATGATGGCAGTTACTGCAGGGGCTGACTTCTGCTATGCTATCGAG 432
               ||||||||||||| || || ||||| || |||||||||||||| ||||  
fk00541    801 TGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCG.. 848
                 S  M  M  A  V  T  A  G  A  D  F  C  Y  A  I  E  

           851 ----+----*----+----*----+----*----+----*----+----* 900
mpj03948   433 GTTTTTAAGCCTATGGCTGAGGCTGCTGTGAAGATTGTGGAGAGGAATGG 482
                                                                 
fk00541    849 .................................................. 849

           901 ----+----*----+----*----+----*----+----*----+----* 950
mpj03948   483 CTTCAGTGATAAGATTAAAGTCATTAACAAGCACTCCACTGAGGTGACAG 532
                                                                 
fk00541    849 .................................................. 849

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mpj03948   533 TCGGACCAGATGGTGACTTGCCGTGTCGTGCTAACATTCTGATCACGGAG 582
                                                                 
fk00541    849 .................................................. 849

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpj03948   583 CTGTTTGACACAGAGCTGATTGGGGAGGGAGCGCTGCCCTCTTATGAGCA 632
                                                                 
fk00541    849 .................................................. 849

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                                     E  D  C  E  A  V  P  H  R  A
mpj03948   633 TGCACACAAGCATCTTGTCCAGGAAGACTGCGAGGCAGTGCCACACAGGG 682
                                   ||||| | || ||||| ||||| ||||| |
fk00541    849 ....................AGGAAAATTGTGAGGCCGTGCCCCACAGAG 878
                                     E  N  C  E  A  V  P  H  R  A

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                 T  V  Y  A  Q  L  V  E  S  R  R  M  W  S  W  N  
mpj03948   683 CAACTGTCTATGCCCAGCTGGTGGAGTCCCGAAGGATGTGGTCCTGGAAC 732
               | || |||||||| ||||||||||||||| | ||||||||||| ||||||
fk00541    879 CCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGAAC 928
                 T  V  Y  A  Q  L  V  E  S  G  R  M  W  S  W  N  

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
               K  L  F  P  V  R  V  R  T  S  L  G  E  Q  V  I  V 
mpj03948   733 AAGCTGTTTCCCGTCCGTGTCCGGACGAGTCTAGGCGAGCAGGTCATCGT 782
               ||||| |||||| |||  || | ||| || || || ||||||||||||||
fk00541    929 AAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGT 978
               K  L  F  P  I  H  V  Q  T  S  L  G  E  Q  V  I  V 

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                P  P  S  E  L  E  R  C  P  G  A  P  S  V  C  D  I
mpj03948   783 CCCCCCCTCAGAATTGGAGAGGTGTCCTGGTGCGCCTTCAGTCTGTGACA 832
               ||| |||   ||  ||||||| || ||||| || || || ||||||||||
fk00541    979 CCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGACA 1028
                P  P  V  D  V  E  S  C  P  G  A  P  S  V  C  D  I

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                 Q  L  N  Q  V  S  P  A  D  F  T  V  L  S  D  V  
mpj03948   833 TTCAGCTGAACCAGGTGTCGCCTGCTGACTTCACTGTCCTCAGTGATGTG 882
               ||||||||||||||||||| || || ||||| || |||||||| ||||||
fk00541   1029 TTCAGCTGAACCAGGTGTCACCAGCCGACTTTACAGTCCTCAGCGATGTG 1078
                 Q  L  N  Q  V  S  P  A  D  F  T  V  L  S  D  V  

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
               L  P  M  F  S  V  D  F  S  K  Q  V  S  S  S  A  A 
mpj03948   883 CTGCCAATGTTCAGCGTGGACTTCAGCAAGCAAGTCAGCAGCTCGGCAGC 932
               ||||| ||||||||| | |||||||||||||||||||| ||||| |||||
fk00541   1079 CTGCCCATGTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGCAGC 1128
               L  P  M  F  S  I  D  F  S  K  Q  V  S  S  S  A  A 

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                C  H  S  R  Q  F  V  P  L  A  S  G  Q  A  Q  V  V
mpj03948   933 GTGCCATAGCAGGCAGTTTGTACCTTTGGCGTCTGGCCAAGCACAGGTGG 982
                ||||||||||||| ||||| |||| || | ||||||| ||| |||||||
fk00541   1129 CTGCCATAGCAGGCGGTTTGAACCTCTGACATCTGGCCGAGCTCAGGTGG 1178
                C  H  S  R  R  F  E  P  L  T  S  G  R  A  Q  V  V

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                 L  S  W  W  D  I  E  M  D  P  E  G  K  I  K  C  
mpj03948   983 TTCTGTCCTGGTGGGACATTGAAATGGACCCTGAGGGCAAGATCAAGTGC 1032
               |||| || ||||||||||||||||||||||||||||| ||||||||||||
fk00541   1179 TTCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGC 1228
                 L  S  W  W  D  I  E  M  D  P  E  G  K  I  K  C  

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
               T  M  A  P  F  W  A  Q  T  D  P  Q  E  L  Q  W  R 
mpj03948  1033 ACCATGGCACCCTTTTGGGCACAGACAGATCCGCAGGAGCTTCAGTGGCG 1082
               |||||||| ||||| ||||||||  |||| ||  ||||| | ||||||||
fk00541   1229 ACCATGGCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATGCAGTGGCG 1278
               T  M  A  P  F  W  A  H  S  D  P  E  E  M  Q  W  R 

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                D  H  W  M  Q  C  V  Y  F  L  P  Q  E  E  P  V  V
mpj03948  1083 GGACCACTGGATGCAGTGTGTGTACTTCCTGCCGCAGGAGGAGCCTGTTG 1132
               ||||||||||||||||||||||||||||||||| || ||||||||||| |
fk00541   1279 GGACCACTGGATGCAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGG 1328
                D  H  W  M  Q  C  V  Y  F  L  P  Q  E  E  P  V  V

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
                 Q  G  S  P  R  C  L  V  A  H  H  D  D  Y  C  V  
mpj03948  1133 TGCAGGGCTCACCCCGGTGCCTGGTAGCCCACCATGATGACTACTGTGTG 1182
               ||||||||||| | |  |  |||||||||||||| ||||||||||| || 
fk00541   1329 TGCAGGGCTCAGCGCTCTATCTGGTAGCCCACCACGATGACTACTGCGTA 1378
                 Q  G  S  A  L  Y  L  V  A  H  H  D  D  Y  C  V  

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
               W  Y  S  L  Q  R  T  S  P  D  E  N  D  S  A  Y  Q 
mpj03948  1183 TGGTACAGCCTTCAGAGAACCAGCCCTGATGAGAACGACAGCGCCTACCA 1232
               ||||||||||| ||||| |||||||||||  |||| || || | |  |||
fk00541   1379 TGGTACAGCCTGCAGAGGACCAGCCCTGAAAAGAATGAGAGAGTCCGCCA 1428
               W  Y  S  L  Q  R  T  S  P  E  K  N  E  R  V  R  Q 

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
                V  R  P  V  C  D  C  Q  A  H  L  L  W  N  R  P  R
mpj03948  1233 AGTGCGACCTGTGTGTGACTGTCAGGCTCACTTGCTCTGGAACCGGCCTC 1282
                 |||| || ||||||||||| ||||||||| ||||||||||||||||||
fk00541   1429 GATGCGCCCCGTGTGTGACTGCCAGGCTCACCTGCTCTGGAACCGGCCTC 1478
                M  R  P  V  C  D  C  Q  A  H  L  L  W  N  R  P  R

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
                 F  G  E  I  N  D  Q  D  R  T  D  H  Y  A  Q  A  
mpj03948  1283 GGTTTGGAGAAATCAATGATCAGGACAGAACTGATCACTATGCCCAGGCC 1332
               |||||||||| |||||||| ||||||||||||||||  || | |||||| 
fk00541   1479 GGTTTGGAGAGATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCT 1528
                 F  G  E  I  N  D  Q  D  R  T  D  R  Y  V  Q  A  

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
               L  R  T                                           
mpj03948  1333 CTGAGGACTGTGCTGCTGCCAGGTAGCGTCTGCCTTTGTGTGAGTGATGG 1382
               ||||||||                                          
fk00541   1529 CTGAGGAC.......................................... 1536
               L  R  T                                           

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpj03948  1383 CAGTCTCCTCTCCATGCTGGCCCATCACCTCGGAGCGGAGCAGGTGTTTA 1432
                                                                 
fk00541   1537 .................................................. 1537

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpj03948  1433 CAGTTGAGAGTTCAGTAGCTTCCTATAGACTGATGAAAAGGATCTTCAAG 1482
                                                                 
fk00541   1537 .................................................. 1537

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpj03948  1483 GTTAACCACTTGGAAGATAAAATCAGTGTCATCAATAAACGGCCTGAGTT 1532
                                                                 
fk00541   1537 .................................................. 1537

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
                                              V  S  L  L  L  G  E
mpj03948  1533 GCTGACAGCTGCAGACCTGGAGGGCAAGAAGGTCTCCCTCCTCCTGGGTG 1582
                                              ||||| ||||||||||| |
fk00541   1537 ..............................CGTCTCTCTCCTCCTGGGCG 1556
                                              V  S  L  L  L  G  E

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
                 P  F  F  T  T  S  L  L  P  W  H  N  L  Y  F  W  
mpj03948  1583 AACCCTTTTTCACCACCAGCCTGCTGCCATGGCACAACCTGTACTTCTGG 1632
               | || || ||||| |||||||||||||| ||||||||||| |||||||||
fk00541   1557 AGCCGTTCTTCACTACCAGCCTGCTGCCGTGGCACAACCTCTACTTCTGG 1606
                 P  F  F  T  T  S  L  L  P  W  H  N  L  Y  F  W  

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
               Y  V  R  T  S  V  D  Q  H  L  A  P  G  A  V  V  M 
mpj03948  1633 TATGTCCGTACCTCTGTGGACCAGCACCTAGCACCTGGAGCTGTGGTGAT 1682
               || || || ||| |||||||||||||||| |  || || ||  |||||||
fk00541   1607 TACGTGCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGAT 1656
               Y  V  R  T  A  V  D  Q  H  L  G  P  G  A  M  V  M 

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
                P  Q  A  A  S  L  H  A  V  I  V  E  F  R  D  L  W
mpj03948  1683 GCCTCAGGCTGCCTCACTGCATGCCGTGATTGTGGAGTTCAGGGACCTGT 1732
               ||| ||||| ||||| ||||| || ||| |||||||||||||||||||||
fk00541   1657 GCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGACCTGT 1706
                P  Q  A  A  S  L  H  A  V  V  V  E  F  R  D  L  W

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
                 R  I  R  S  P  C  G  D  C  E  G  F  D  V  H  I  
mpj03948  1733 GGCGGATCCGGAGTCCTTGCGGTGACTGCGAAGGTTTTGATGTGCACATC 1782
               ||||||||||||| || || |||||||||||||| || || |||||||||
fk00541   1707 GGCGGATCCGGAGCCCCTGTGGTGACTGCGAAGGCTTCGACGTGCACATC 1756
                 R  I  R  S  P  C  G  D  C  E  G  F  D  V  H  I  

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
               M  D  D  M  I  K  H  S  L  D  F  R  E  S  R  E  A 
mpj03948  1783 ATGGATGATATGATCAAGCACTCCCTGGATTTCCGAGAGAGCAGAGAGGC 1832
               ||||| || ||||| ||||   ||||||| ||| | |||||||| || ||
fk00541   1757 ATGGACGACATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGC 1806
               M  D  D  M  I  K  R  A  L  D  F  R  E  S  R  E  A 

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
                E  P  H  P  L  W  E  Y  P  C  R  S  L  S  K  P  Q
mpj03948  1833 AGAGCCACACCCACTGTGGGAATACCCCTGCAGAAGCCTCTCCAAGCCTC 1882
                ||||| ||||| |||||||| ||||| ||| | ||||||||| ||||  
fk00541   1807 TGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT 1856
                E  P  H  P  L  W  E  Y  P  C  R  S  L  S  E  P  W

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
                 E  I  L  T  F  D  F  Q  Q  P  I  P  Q  Q  P  M  
mpj03948  1883 AAGAGATCCTGACTTTTGATTTCCAGCAGCCCATCCCCCAACAGCCTATG 1932
                  |||||||||| ||||| |||||||||||  | ||||  |||||  ||
fk00541   1857 GGCAGATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCAGCCCCTG 1906
                 Q  I  L  T  F  D  F  Q  Q  P  V  P  L  Q  P  L  

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
               Q  S  K  G  T  M  E  L  T  R  P  G  K  S  H  G  A 
mpj03948  1933 CAATCCAAGGGCACAATGGAGCTGACAAGACCCGGGAAGAGCCATGGGGC 1982
                   || |||||||  ||||||| | ||| |||||| ||||||| |  ||
fk00541   1907 TGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGC 1956
               C  A  E  G  T  V  E  L  R  R  P  G  Q  S  H  A  A 

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                V  L  W  M  E  Y  Q  L  T  P  D  S  T  I  S  T  G
mpj03948  1983 TGTCCTGTGGATGGAGTATCAGCTCACTCCAGACAGCACGATCAGCACTG 2032
                || || ||||||||||| || || || || ||  ||||| |||||||||
fk00541   1957 GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTG 2006
                V  L  W  M  E  Y  H  L  T  P  E  C  T  L  S  T  G

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
                 L  I  N  P  A  E  D  K  G  D  C  C  W  N  P  H  
mpj03948  2033 GCCTCATAAACCCTGCAGAAGACAAGGGGGACTGCTGCTGGAACCCCCAC 2082
               ||||| |  | ||||||||     |||||| |||||||||||||||||||
fk00541   2007 GCCTCCTGGAGCCTGCAGACCCTGAGGGGGGCTGCTGCTGGAACCCCCAC 2056
                 L  L  E  P  A  D  P  E  G  G  C  C  W  N  P  H  

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
               C  K  Q  A  V  Y  F  L  S  T  T  L  D  L  R  V  P 
mpj03948  2083 TGCAAGCAAGCTGTGTACTTCCTCAGCACCACGCTGGATCTCAGAGTGCC 2132
               |||||||| || || |||||| ||||| |  | |  |||| |||||  | 
fk00541   2057 TGCAAGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCACT 2106
               C  K  Q  A  V  Y  F  F  S  P  A  P  D  P  R  A  L 

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                L  N  G  P  R  S  V  S  Y  V  V  E  F  H  P  L  T
mpj03948  2133 TCTGAATGGCCCTCGGTCAGTCAGCTATGTTGTGGAGTTTCACCCCCTCA 2182
                |||  |||||| ||| | ||||||||||  |||||||||||||||  ||
fk00541   2107 GCTGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACA 2156
                L  G  G  P  R  T  V  S  Y  A  V  E  F  H  P  D  T

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
                 G  D  I  T  M  E  F  R  L  A  D  T  L  S  *     
mpj03948  2183 CTGGAGACATCACCATGGAGTTTAGGCTTGCAGACACCTTGAGCTGATCT 2232
               | || ||||||| ||||||||| |||| |||||| |||     |||| | 
fk00541   2157 CAGGCGACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCA 2206
                 G  D  I  I  M  E  F  R  H  A  D  T  P  D  *     

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpj03948  2233 CTTATTGAGAAATAAAATGGCCAGCAGGCT.................... 2262
               | | ||||| |||||| ||||| |  ||||                    
fk00541   2207 C.TCTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTCTGAGTGGCTCATG 2255

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2256 GCTTTCTAGGGGGGAAGGCTGAAGGCCCTCCTCTCCTCTCTGGGAGCTGC 2305

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2306 TCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCT 2355

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2356 TTGCACTGCTGGCCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGGTG 2405

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2406 ACTGAATTTGGAGCCCTGGAGGGGCTGGGAAGACCCCCCTGCTTGTGCTT 2455

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2456 CTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCAGCTGGGA 2505

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2506 AGGGAGTGGAAGCACAGGGAGCTTGTGGGGCTGGCCGGTGGGGTTGTCCA 2555

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2556 CGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTCTGTCT 2605

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2606 CACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCTTCTGCTAGGAGGG 2655

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2656 TGGAGATTTCTGGCCCTCTAGTGGGTGGAGATGCTGAGTTGTGGCTGGGT 2705

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2706 CTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCCTGGGTTC 2755

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2756 TGGCCCTTTCACCTGACAGGTAACTTCAAGCCACATCCATAGGTGTCTGG 2805

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2806 CCTCAGTGCTGCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGACACA 2855

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2856 AGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCT 2905

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2906 GTCAGGGGAGCTGGGAGGCAGCCCTGTTCCCTGCACCTCCCTCAGATTGG 2955

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   2956 AAAGCCCCTCCTGCAGGTGGGGTATGGCAGGGAGCAGCCCCTGCCCAGCG 3005

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   3006 CCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACAC 3055

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   3056 ACTAACCCCCCTTTGGTTATGTCCCAGCTCTCAGAGGTAACAGCAGACAC 3105

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   3106 CACGTGAGAGAACCCAGTGGCCTCTGGCTCGCAGCTTAGAAGGTGAGGCT 3155

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpj03948  2263 .................................................. 2263
                                                                 
fk00541   3156 TGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCG 3205

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mpj03948  2263 ........GCAGACTCTG................................ 2272
                       |||||||  |                                
fk00541   3206 GATTCAGGGCAGACTTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAAC 3255

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3256 TCCCTCCCCTGCCCCCAGGCGTGCCCCTGAGGCCTGGCCCCAACTTGTCG 3305

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3306 CTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCACAGTTTTATTTTCTC 3355

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3356 CTCGTTATCCATCCTTCCTTTCAGCACCAGTAAGGAAAAAGAACACCTCT 3405

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3406 CTTCGCAAAATATTTTATCAGGTGTAAAGACTTGTTTTTCTTCTAGGGAA 3455

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3456 GAACCGTCTGGATATATATTTGATAATGTTTTTACCAAAACCATAGGTGT 3505

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mpj03948  2273 .................................................. 2273
                                                                 
fk00541   3506 GCTTACCATAGAAAACCCCTAATGTCCCATGAAGATACAATACAGAAAAA 3555

          4001 ----+----*-- 4012
mpj03948  2273 ............ 2273
                           
fk00541   3556 AATACAGAAATT 3567