FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4065.ptfa, 779 aa vs ./tmplib.26680 library 1768238 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.2433+/-0.00608; mu= 12.1938+/- 0.405 mean_var=175.1102+/-40.881, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.0969 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0388 ( 758 res) mbh00510 ( 758) 2725 394 4.4e-110 mKIAA1420 ( 907 res) mfj05028 ( 907) 340 60 1.2e-09 mKIAA1090 ( 857 res) mph00524 ( 857) 338 60 1.4e-09 mKIAA1076 ( 855 res) mbh01320 ( 855) 336 60 1.7e-09 mKIAA0339 ( 822 res) mph02448 ( 822) 319 57 8.6e-09 mKIAA1876 ( 348 res) mpj00624 ( 348) 311 56 1.1e-08 mKIAA0304 ( 1744 res) mbg06324 (1744) 312 57 2.7e-08 mKIAA1506 ( 1520 res) mbg19167 (1520) 300 55 7.9e-08 >>mKIAA0388 ( 758 res) mbh00510 (758 aa) initn: 3186 init1: 1817 opt: 2725 Z-score: 2068.8 bits: 393.5 E(): 4.4e-110 Smith-Waterman score: 3374; 65.119% identity (69.252% ungapped) in 754 aa overlap (48-778:26-757) 20 30 40 50 60 70 mKIAA4 ATRGRGAGWRAGRRIIMGQTGKKSEKGPVCWRKRVKSEYMRLRQLKRFRRADEVKTMFSS :...:::::::::::::.. .:... . mKIAA0 SQHFPLHSMRKMDIASPPTSKCITYWKRKVKSEYMRLRQLKRLQANMGAKALYVA 10 20 30 40 50 80 90 100 110 120 130 mKIAA4 NRQKILERTETLNQEWKQRRIQPVHIMTSVSSLRGTRECSVTSDLD-FPAQVIPLKTLNA : :. :.:. ::.:::. :.:::. : ::. ..:.. : . : .: . ...::. mKIAA0 NFAKVQEKTQILNEEWKKLRVQPVQPMKPVSGHPFLKKCTIESIFPGFDSQDMLMRSLNT 60 70 80 90 100 110 140 150 160 170 180 190 mKIAA4 VASVPIMYSWSPLQQNFMVEDETVLHNIPYMGDEVLDQDGTFIEELIKNYDGKVHGDREC :: :::::::::::::::::::::: ::::::::: ..: :::::::.::::::::..: mKIAA0 VALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEM 120 130 140 150 160 170 200 210 220 230 240 mKIAA4 --G--FINDEIFVELVNALGQYNDDDDDDDGDDPD-EREEKQKDLEDNRDDK-------E : .:.: .:.:::.::.::.:...: .: : .......:: .: : . mKIAA0 IPGSVLISDAVFLELVDALNQYSDEEEDGHNDPSDGKQDDSKEDLPVTRKRKRHAIEGNK 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA4 TCPPRKFPADKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECTPNIDGPNAKS ..:: : :: ::.::::..:. ...::.:.::::.. :.::::.:::::::::::: mKIAA0 KSSKKQFPNDMIFSAIASMFPENGVPDDMKERYRELTEMSDPNALPPQCTPNIDGPNAKS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA4 VQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNTETALDNKPCGPQCYQHLEGA :::::::::::::::::::::::::::::::::.::::: : .. .::: .:. :::: mKIAA0 VQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNKEIKIEPEPCGTDCFLLLEGA 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA4 KEFAAALTAERIKTPPKRPGGRRRGRLPNNSSRPSTPTISVL-ESKDTDSDREAGTETGG ::.: ...: .. .:::: : : :. :. . :.. :.:. ::::..:. mKIAA0 KEYAM------LHNPRSKCSGRRRRRHPVVSASCSNASASAMAETKEGDSDRDTGN---- 360 370 380 390 400 430 440 450 460 470 mKIAA4 ENNDKEEEEKKDETSSSSEANSRCQTPIKMKPN--------IE-PPENVEWSGAEASMFR : .::::::::::::: :.: . .: : : :::.::: :.:: mKIAA0 -----------DWASSSSEANSRCQTPTKQKASPAPAQLCVVEAPSEPVEWTGAEESLFR 410 420 430 440 450 480 490 500 510 520 530 mKIAA4 VLIGTYYDNFCAIARLIGTKTCRQVYEFRVKESSIIAPVPTEDVDTPPRKKKRKHRLWAA :. :::..:::.::::.:::::.::..: :::: .: .::... .: .::::::::::: mKIAA0 VFHGTYFNNFCSIARLLGTKTCKQVFQFAVKES-LILKLPTDELMNPAQKKKRKHRLWAA 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA4 HCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCR ::::::::::..:..:::::::::: .::::.:::...::::::::::: .::::::::: mKIAA0 HCRKIQLKKDNNSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCEKFCQCSPDCQNRFPGCR 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA4 CKAQCNTKQCPCYLAVRECDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDV ::.::::::::::::::::::::::::::..::: : ::::::::::: ::::::::::: mKIAA0 CKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDV 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA4 AGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKG :::: :::. :::::::::::::.::::::::::::::::: :::::::::::::::::: mKIAA0 AGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKG 640 650 660 670 680 690 720 730 740 750 760 770 mKIAA4 NKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIER ::::::::::::::::::.:::::::::::::::::.::::::::::::::::::::::: mKIAA0 NKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIER 700 710 720 730 740 750 mKIAA4 EMEIP : .. mKIAA0 ETDVF >>mKIAA1420 ( 907 res) mfj05028 (907 aa) initn: 335 init1: 197 opt: 340 Z-score: 265.6 bits: 60.2 E(): 1.2e-09 Smith-Waterman score: 348; 31.915% identity (34.286% ungapped) in 188 aa overlap (583-768:32-208) 560 570 580 590 600 610 mKIAA4 YQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCRCKAQCNTKQCPCYLAVRE .. :. . : . :. .: . : mKIAA1 NQLYKKPDVPLYKKIRSNVYVDVKPLSGYEATTCNCKKPDDDTRKGCGD-DCLNRMIFAE 10 20 30 40 50 60 620 630 640 650 660 670 mKIAA4 CDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLA-PSDVAGWGIFIKDPVQKNEFI :.:. : :: .: : ::: . : .. :::: :.:.. ..:: mKIAA1 CSPNTC-PCGE---------QCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFI 70 80 90 100 110 680 690 700 710 720 730 mKIAA4 SEYCGEIISQDE-ADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYA :: ::..:..: .: . : .. . .::.. .:.:. : ::. :: ::: .::: mKIAA1 IEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEM 120 130 140 150 160 170 740 750 760 770 mKIAA4 KVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP . ::: .:::..: . . .: :: .:: . . .. : mKIAA1 QKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQRM 180 190 200 210 220 230 mKIAA1 NGLPSHKGSQSSSTHRKSARAKEKRKSKHKLKKRKGHPSEEPSENINTPTRLTPQLQMKP 240 250 260 270 280 290 >>mKIAA1090 ( 857 res) mph00524 (857 aa) initn: 390 init1: 168 opt: 338 Z-score: 264.3 bits: 59.8 E(): 1.4e-09 Smith-Waterman score: 338; 33.333% identity (37.267% ungapped) in 180 aa overlap (588-759:503-671) 560 570 580 590 600 610 mKIAA4 HPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCRCKAQ----CNT-KQCPCYLAVRE ...: : :: :.. ..: . . : mKIAA1 TQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDENPCGSDSECLNRMLMFE 480 490 500 510 520 530 620 630 640 650 660 670 mKIAA4 CDPDLCLTCGAADHWDSKNVSCKN-CSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFI : :..: :... :.: : .: . .. .: :::. : ..:.::. mKIAA1 CHPQVC---PAGEY-------CQNQCFTKRQYPETKIIK-TDGKGWGLVAKRDIRKGEFV 540 550 560 570 580 680 690 700 710 720 mKIAA4 SEYCGEIISQDEADRRGK-VYDKYMCSF-LFNLNNDFVVDATRKGNKIRFANHSVNPNCY .:: ::.:...: : : .... . : ......: ..:: ::: :: ::: .::: mKIAA1 NEYVGELIDEEECMARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCE 590 600 610 620 630 640 730 740 750 760 770 mKIAA4 AKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP . :::: :.:.:: : .: :: :.: mKIAA1 TLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPKTS 650 660 670 680 690 700 >>mKIAA1076 ( 855 res) mbh01320 (855 aa) initn: 370 init1: 193 opt: 336 Z-score: 262.8 bits: 59.6 E(): 1.7e-09 Smith-Waterman score: 336; 41.129% identity (41.803% ungapped) in 124 aa overlap (644-765:715-838) 620 630 640 650 660 670 mKIAA4 DPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISE ::.: . : . ::.: .:. .:.. : mKIAA1 ERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIE 690 700 710 720 730 740 680 690 700 710 720 730 mKIAA4 YCGEIISQDEADRRGKVY-DKYM-CSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAK : :. : : :: : : : :. . :..: ...: ..:::. :: :: ::: ::::::: mKIAA1 YVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAK 750 760 770 780 790 800 740 750 760 770 mKIAA4 VMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP :. :.....: :..:. :...::. .::.. :. mKIAA1 VITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 810 820 830 840 850 >>mKIAA0339 ( 822 res) mph02448 (822 aa) initn: 510 init1: 212 opt: 319 Z-score: 250.2 bits: 57.2 E(): 8.6e-09 Smith-Waterman score: 357; 24.726% identity (28.753% ungapped) in 457 aa overlap (336-765:386-805) 310 320 330 340 350 360 mKIAA4 QREQSLHSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNTETALDNKPCGPQCYQHLEGAK :. . :::. . . .: .:. . mKIAA0 EEATESGTEVDLAVLADLALTPARRGLATLPTGDDSEATETSDEAERPSPL-LSHILLEH 360 370 380 390 400 410 370 380 390 400 410 mKIAA4 EFAAALTAERIKTPPKRPGGRRRGRLPNNSSRPSTPTISVLESKDT---------DSDRE ..: : :: :: :. : : .. :.:. :::. .. .. .. mKIAA0 NYALA-----IKPPPTTPAPRPLEPAPALAALFSSPADEVLEAPEVVVAEAEEPKQQLQQ 420 430 440 450 460 420 430 440 450 460 mKIAA4 AGTETGGENNDKEEEEKKDETSSSSEANSRCQTPIKM----------KPNIEPPENVEWS : ::.....:::... . ::: ..: . :. .: . :: : mKIAA0 QHPEQEGEEEEEDEEEESESSESSSSSSSDEEGAIRRRSLRSHTRRRRPPLPPPPPPPPS 470 480 490 500 510 520 470 480 490 500 510 520 mKIAA4 GAEASMFRVLIGTYYDNFCAIARLIGTKTCRQVYEFRVKESSIIAPVPTEDVDTPPRKKK : :. . :: . . : . : .:: ....: .: mKIAA0 FEPRSEFEQMT-ILYDIWNSGLDLEDMSYLRLTYERLLQQTS--------GAD------- 530 540 550 560 570 530 540 550 560 570 580 mKIAA4 RKHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSEC : . .: . :. . .: : ::. .: :.. : . :.. mKIAA0 -----WLNDTHWVQHTITNLSTPKRKRRPQDGPREHQTGS-----ARS--EGYYPISKKE 580 590 600 610 620 590 600 610 620 630 640 mKIAA4 QNRFPG-CRCKAQC----NTKQCPCYLAVRECDPDLCLTC-GAADHWDSKNVSCKNCSIQ .... : .:. .:. :. :. . :. :.. :: .. .. ... mKIAA0 KDKYLDVCPVSARQLEGGDTQGTNRVLSERRSEQRRLLSAIGTSAIMDSDLLKLNQLKFR 630 640 650 660 670 680 650 660 670 680 690 mKIAA4 RGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVY--DKYMCSF ::.: .. : . ::.: .:. .:.. :: :. : : :: : : : . :. mKIAA0 ---KKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGSSY 690 700 710 720 730 700 710 720 730 740 750 mKIAA4 LFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFD :: ...: ..:::. :: :: :: .:::::::. ......: :..:. : . ::. .: mKIAA0 LFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEEITYD 740 750 760 770 780 790 760 770 mKIAA4 YRYSQADALKYVGIEREMEIP :.. : mKIAA0 YKFPLEDNKIPCLCGTESCRGSLN 800 810 820 >>mKIAA1876 ( 348 res) mpj00624 (348 aa) initn: 250 init1: 97 opt: 311 Z-score: 248.2 bits: 55.6 E(): 1.1e-08 Smith-Waterman score: 311; 32.710% identity (37.838% ungapped) in 214 aa overlap (561-759:83-282) 540 550 560 570 580 mKIAA4 LWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCE-KFCQCSSECQNR : : .: : : .:. . ..: : ..:.. mKIAA1 DIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTS-PMNIDRNITHLQYCVCVDDCSSS 60 70 80 90 100 110 590 600 610 620 630 640 mKIAA4 FPGC-----RCKAQCNTKQCPCYLAVRECDPDLCLTCG-AADHWDSKNVSCKNCSIQRGS : :: . . . : . .: : . :. : . : .: :.: .: : mKIAA1 TCMCGQLSMRCWYDKDGRLLPEF---NMAEPPLIFECNHACSCW--RN--CRNRVVQNGL 120 130 140 150 160 650 660 670 680 690 700 mKIAA4 KKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLN . .: : .. :::. . . . :. :: ::.::..::: : . : :.::.:. mKIAA1 RARLQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVREE--D----SYLFDLD 170 180 190 200 210 710 720 730 740 750 mKIAA4 ND----FVVDATRKGNKIRFANHSVNPNCY-AKVMMVNGD---HRIGIFAKRAIQTGEEL : . .:: :: :: :: .:: ..:.: . : ::..:. : ::.::.: mKIAA1 NKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQL 220 230 240 250 260 270 760 770 mKIAA4 FFDYRYSQADALKYVGIEREMEIP ::: mKIAA1 GFDYGERFWDVKGKLFSCRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPP 280 290 300 310 320 330 >>mKIAA0304 ( 1744 res) mbg06324 (1744 aa) initn: 293 init1: 212 opt: 312 Z-score: 241.3 bits: 56.6 E(): 2.7e-08 Smith-Waterman score: 312; 40.769% identity (41.732% ungapped) in 130 aa overlap (639-766:1598-1726) 610 620 630 640 650 660 mKIAA4 AVRECDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKN ... ::. . . : . : :.: : .. . mKIAA0 TCDEEEDEVQLRSTRRATSLELPMAMRFRHLKKTSKEAVGVYRSAIHGRGLFCKRNIDAG 1570 1580 1590 1600 1610 1620 670 680 690 700 710 720 mKIAA4 EFISEYCGEIISQDEADRRGKVYD-KYMCSFLFNLNNDF-VVDATRKGNKIRFANHSVNP :.. :: : .: . .:.: : :: : . ..: .. :: ::::: .:: :: ::: .: mKIAA0 EMVIEYSGIVIRSVLTDKREKFYDGKGIGCYMFRMD-DFDVVDATMHGNAARFINHSCEP 1630 1640 1650 1660 1670 1680 730 740 750 760 770 mKIAA4 NCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP ::...:. :.:...: ::: : : :::: .::.. :: mKIAA0 NCFSRVIHVEGQKHIVIFALRRILRGEELTYDYKFPIEDASNKLPCNCGAKRCRRFLN 1690 1700 1710 1720 1730 1740 >>mKIAA1506 ( 1520 res) mbg19167 (1520 aa) initn: 258 init1: 191 opt: 300 Z-score: 232.9 bits: 54.9 E(): 7.9e-08 Smith-Waterman score: 300; 37.398% identity (37.705% ungapped) in 123 aa overlap (644-765:1379-1501) 620 630 640 650 660 670 mKIAA4 DPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISE :... :: : . : :.. ..:. .. : mKIAA1 STVTGELNAPYSKQFVHSKSSQYRRMKTEWKSNVYLARSRIQGLGLYAARDIEKHTMVIE 1350 1360 1370 1380 1390 1400 680 690 700 710 720 730 mKIAA4 YCGEIISQDEADRRGKVYD-KYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKV : : :: .. :.:. :.:. . ..: ..:: :.::: :. :. ::: ::: :.: mKIAA1 YIGTIIRNEVANRKEKLYESQNRGVYMFRMDNDHVIDATLTGGPARYINHSCAPNCVAEV 1410 1420 1430 1440 1450 1460 740 750 760 770 mKIAA4 MMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP . . :.: : ..: :: :::: .::... : mKIAA1 VTFERGHKIIISSNRRIQKGEELCYDYKFDFEDDQHKIPCHCGAVNCRKWMN 1470 1480 1490 1500 1510 1520 779 residues in 1 query sequences 1768238 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:00:50 2006 done: Mon Mar 27 11:00:52 2006 Scan time: 0.910 Display time: 0.250 Function used was FASTA [version 3.4t11 Apr 17, 2002]