# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj03270.fasta.nr -Q ../query/mKIAA0064.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0064, 502 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920411 sequences Expectation_n fit: rho(ln(x))= 5.0467+/-0.000185; mu= 12.3583+/- 0.010 mean_var=71.2809+/-13.822, 0's: 30 Z-trim: 38 B-trim: 0 in 0/65 Lambda= 0.151910 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|108860975|sp|Q8BVL3.2|SNX17_MOUSE RecName: Full ( 470) 3044 676.3 4.9e-192 gi|26346711|dbj|BAC37004.1| unnamed protein produc ( 470) 3039 675.2 1e-191 gi|109102441|ref|XP_001089913.1| PREDICTED: sortin ( 500) 3029 673.0 5e-191 gi|114576791|ref|XP_515357.2| PREDICTED: sorting n ( 520) 3025 672.2 9.4e-191 gi|81884652|sp|Q6AYS6.1|SNX17_RAT RecName: Full=So ( 470) 3017 670.4 2.9e-190 gi|149727680|ref|XP_001502367.1| PREDICTED: simila ( 470) 3003 667.3 2.5e-189 gi|30583777|gb|AAP36137.1| Homo sapiens sorting ne ( 471) 3002 667.1 2.9e-189 gi|75057917|sp|Q5EA77.1|SNX17_BOVIN RecName: Full= ( 470) 3001 666.9 3.3e-189 gi|73979956|ref|XP_540126.2| PREDICTED: similar to ( 470) 3000 666.6 3.9e-189 gi|62896645|dbj|BAD96263.1| sorting nexin 17 varia ( 470) 2996 665.8 7.1e-189 gi|75040924|sp|Q5R4A5.1|SNX17_PONAB RecName: Full= ( 470) 2987 663.8 2.8e-188 gi|126303084|ref|XP_001371143.1| PREDICTED: simila ( 470) 2919 648.9 8.6e-184 gi|194391362|dbj|BAG60799.1| unnamed protein produ ( 450) 2864 636.8 3.5e-180 gi|194373727|dbj|BAG56959.1| unnamed protein produ ( 440) 2801 623.0 5e-176 gi|194390388|dbj|BAG61930.1| unnamed protein produ ( 458) 2703 601.5 1.5e-169 gi|194385166|dbj|BAG60989.1| unnamed protein produ ( 445) 2690 598.7 1.1e-168 gi|73979968|ref|XP_860993.1| PREDICTED: similar to ( 403) 2533 564.2 2.2e-158 gi|118089103|ref|XP_419999.2| PREDICTED: similar t ( 456) 2504 557.9 2e-156 gi|224048992|ref|XP_002188500.1| PREDICTED: simila ( 503) 2503 557.7 2.5e-156 gi|213624609|gb|AAI71334.1| Unknown (protein for M ( 467) 2502 557.5 2.8e-156 gi|48735073|gb|AAH72328.1| MGC83142 protein [Xenop ( 467) 2484 553.6 4.3e-155 gi|194386030|dbj|BAG59579.1| unnamed protein produ ( 388) 2458 547.8 1.9e-153 gi|28175281|gb|AAH45228.1| Snx17-prov protein [Xen ( 467) 2442 544.4 2.5e-152 gi|190338213|gb|AAI62993.1| Snx17 protein [Danio r ( 472) 2436 543.0 6.3e-152 gi|82078448|sp|Q5RID7.1|SNX17_DANRE RecName: Full= ( 473) 2424 540.4 3.9e-151 gi|47498024|ref|NP_998873.1| hypothetical protein ( 443) 2164 483.4 5.3e-134 gi|194374035|dbj|BAG62330.1| unnamed protein produ ( 329) 2077 464.2 2.3e-128 gi|73979952|ref|XP_860740.1| PREDICTED: similar to ( 256) 1637 367.7 2e-99 gi|119620989|gb|EAX00584.1| sorting nexin 17, isof ( 256) 1634 367.1 3.2e-99 gi|221046134|dbj|BAH14744.1| unnamed protein produ ( 256) 1625 365.1 1.3e-98 gi|210093091|gb|EEA41301.1| hypothetical protein B ( 400) 1521 342.5 1.3e-91 gi|189233693|ref|XP_969378.2| PREDICTED: similar t ( 466) 1336 302.0 2.3e-79 gi|156216230|gb|EDO37172.1| predicted protein [Nem ( 435) 1328 300.2 7.5e-79 gi|212518709|gb|EEB20430.1| Sorting nexin-17, puta ( 489) 1316 297.6 5.1e-78 gi|73979966|ref|XP_860964.1| PREDICTED: similar to ( 266) 1282 289.9 5.5e-76 gi|115655486|ref|XP_795102.2| PREDICTED: hypotheti (1139) 1271 288.0 9e-75 gi|157014655|gb|EAA12955.4| AGAP011491-PA [Anophel ( 499) 1221 276.8 9.5e-72 gi|108877271|gb|EAT41496.1| sorting nexin [Aedes a ( 495) 1191 270.2 9e-70 gi|47224270|emb|CAG09116.1| unnamed protein produc ( 524) 1178 267.4 6.8e-69 gi|167879492|gb|EDS42875.1| sorting nexin [Culex q ( 466) 1124 255.5 2.3e-65 gi|156551421|ref|XP_001604143.1| PREDICTED: simila ( 484) 1116 253.8 7.9e-65 gi|210113246|gb|EEA61016.1| hypothetical protein B ( 430) 1070 243.6 7.8e-62 gi|119612218|gb|EAW91812.1| hypothetical protein M ( 440) 1062 241.9 2.7e-61 gi|119612219|gb|EAW91813.1| hypothetical protein M ( 439) 1061 241.7 3.1e-61 gi|114621148|ref|XP_001153193.1| PREDICTED: hypoth ( 440) 1058 241.0 4.9e-61 gi|222537716|ref|NP_689841.3| sorting nexin 31 [Ho ( 440) 1056 240.6 6.6e-61 gi|187611509|sp|Q8N9S9.2|SNX31_HUMAN RecName: Full ( 440) 1050 239.3 1.6e-60 gi|21752862|dbj|BAC04249.1| unnamed protein produc ( 440) 1050 239.3 1.6e-60 gi|73974254|ref|XP_848854.1| PREDICTED: similar to ( 402) 1030 234.8 3.2e-59 gi|26329777|dbj|BAC28627.1| unnamed protein produc ( 438) 1025 233.8 7.3e-59 >>gi|108860975|sp|Q8BVL3.2|SNX17_MOUSE RecName: Full=Sor (470 aa) initn: 3044 init1: 3044 opt: 3044 Z-score: 3604.0 bits: 676.3 E(): 4.9e-192 Smith-Waterman score: 3044; 100.000% identity (100.000% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|108 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::::::::::::::::::: gi|108 ASASAVHGNFAFEGIGDEDL 460 470 >>gi|26346711|dbj|BAC37004.1| unnamed protein product [M (470 aa) initn: 3039 init1: 3039 opt: 3039 Z-score: 3598.1 bits: 675.2 E(): 1e-191 Smith-Waterman score: 3039; 99.787% identity (100.000% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|263 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|263 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYEIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::::::::::::::::::: gi|263 ASASAVHGNFAFEGIGDEDL 460 470 >>gi|109102441|ref|XP_001089913.1| PREDICTED: sorting ne (500 aa) initn: 3022 init1: 3022 opt: 3029 Z-score: 3585.9 bits: 673.0 E(): 5e-191 Smith-Waterman score: 3029; 95.344% identity (97.571% similar) in 494 aa overlap (9-502:11-500) 10 20 30 40 50 mKIAA0 KWRAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIH ::: : .. :: . :.:::::::::::::::::::::::::::: gi|109 MPGLLPAEGERAEPLRPSQSGAR----LGRAVGNMHFSIPETESRSGDSGGSAYVAYNIH 10 20 30 40 50 60 70 80 90 100 110 mKIAA0 VNGVLHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAV :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|109 VNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAV 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 RQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAV ::::::::::::::::::::::::::::::::::::::::::::..:::::::::::::: gi|109 RQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLINVLTSDQTEDVLEAV 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 AAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYW 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 DSAYDDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTL :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|109 DSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTL 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 RHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSS 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 VPLPSGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVK ::::::.::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVK 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 KSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGS ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|109 KSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGS 420 430 440 450 460 470 480 490 500 mKIAA0 PSTDASASAVHGNFAFEGIGDEDL :::::::: ::::::::::::::: gi|109 PSTDASASDVHGNFAFEGIGDEDL 480 490 500 >>gi|114576791|ref|XP_515357.2| PREDICTED: sorting nexin (520 aa) initn: 3018 init1: 3018 opt: 3025 Z-score: 3580.9 bits: 672.2 E(): 9.4e-191 Smith-Waterman score: 3025; 95.344% identity (97.368% similar) in 494 aa overlap (9-502:31-520) 10 20 30 mKIAA0 KWRAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIP ::: : .. :: :.:::::::: gi|114 MGPRAPPRTTGCNEGQLHFGLPFRTAAEGERAEPLRPSQSGARP----CRAVGNMHFSIP 10 20 30 40 50 40 50 60 70 80 90 mKIAA0 ETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|114 ETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS 60 70 80 90 100 110 100 110 120 130 140 150 mKIAA0 LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNG 120 130 140 150 160 170 160 170 180 190 200 210 mKIAA0 QKVLVTVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPY :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPY 180 190 200 210 220 230 220 230 240 250 260 270 mKIAA0 VSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQ ::::::::.::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|114 VSVTSLRSKEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQ 240 250 260 270 280 290 280 290 300 310 320 330 mKIAA0 LKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQ 300 310 320 330 340 350 340 350 360 370 380 390 mKIAA0 QLREGSFRVTRMRCWRVTSSVPLPSGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITS ::::::::::::::::::::::::::.::::.:::::::::::::::::::::::::::: gi|114 QLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITS 360 370 380 390 400 410 400 410 420 430 440 450 mKIAA0 PQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|114 PQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATR 420 430 440 450 460 470 460 470 480 490 500 mKIAA0 ESMVKLSSKLSAVSLRGIGSPSTDASASAVHGNFAFEGIGDEDL :::::::::::::::::::::::::::: ::::::::::::::: gi|114 ESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL 480 490 500 510 520 >>gi|81884652|sp|Q6AYS6.1|SNX17_RAT RecName: Full=Sortin (470 aa) initn: 3017 init1: 3017 opt: 3017 Z-score: 3572.0 bits: 670.4 E(): 2.9e-190 Smith-Waterman score: 3017; 98.723% identity (100.000% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV ::::::::::::::::::.::::::::::: gi|818 MHFSIPETESRSGDSGGSTYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|818 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL ::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::::: gi|818 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSDGQKVLVNVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SGGTSTPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SIRKMLRRRVGGNLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::::::::::::::::::: gi|818 ASASAVHGNFAFEGIGDEDL 460 470 >>gi|149727680|ref|XP_001502367.1| PREDICTED: similar to (470 aa) initn: 3003 init1: 3003 opt: 3003 Z-score: 3555.5 bits: 667.3 E(): 2.5e-189 Smith-Waterman score: 3003; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|149 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|149 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVSVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|149 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD :::::::::::::::.::::::::::::::::::::::.::::::::::::::::::::: gi|149 SIRKMLRRRVGGTLRHSDSQQAVKSPPLLESPDASRESIVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::: ::::::::::::::: gi|149 ASASDVHGNFAFEGIGDEDL 460 470 >>gi|30583777|gb|AAP36137.1| Homo sapiens sorting nexin (471 aa) initn: 3002 init1: 3002 opt: 3002 Z-score: 3554.3 bits: 667.1 E(): 2.9e-189 Smith-Waterman score: 3002; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|305 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|305 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|305 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|305 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG ::.::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|305 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::: ::::::::::::::: gi|305 ASASDVHGNFAFEGIGDEDLL 460 470 >>gi|75057917|sp|Q5EA77.1|SNX17_BOVIN RecName: Full=Sort (470 aa) initn: 3001 init1: 3001 opt: 3001 Z-score: 3553.1 bits: 666.9 E(): 3.3e-189 Smith-Waterman score: 3001; 98.298% identity (99.787% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|750 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|750 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|750 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::::: gi|750 DDDVMENRVGLNLLYAQTVADIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:: gi|750 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGTPGTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::: ::::::::::::::: gi|750 ASASDVHGNFAFEGIGDEDL 460 470 >>gi|73979956|ref|XP_540126.2| PREDICTED: similar to Sor (470 aa) initn: 3000 init1: 3000 opt: 3000 Z-score: 3551.9 bits: 666.6 E(): 3.9e-189 Smith-Waterman score: 3000; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|739 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 DLPDDLIGYFSLFLVREKEDGTFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|739 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG ::.::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::: ::::::::::::::: gi|739 ASASDVHGNFAFEGIGDEDL 460 470 >>gi|62896645|dbj|BAD96263.1| sorting nexin 17 variant [ (470 aa) initn: 2996 init1: 2996 opt: 2996 Z-score: 3547.2 bits: 665.8 E(): 7.1e-189 Smith-Waterman score: 2996; 98.298% identity (99.787% similar) in 470 aa overlap (33-502:1-470) 10 20 30 40 50 60 mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV :::::::::::::::::::::::::::::: gi|628 MHFSIPETESRSGDSGGSAYVAYNIHVNGV 10 20 30 70 80 90 100 110 120 mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|628 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|628 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|628 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG ::.::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD ::::::::::::::::::::::::::::::::::.:::.::::::::::::::::::::: gi|628 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESVVKLSSKLSAVSLRGIGSPSTD 400 410 420 430 440 450 490 500 mKIAA0 ASASAVHGNFAFEGIGDEDL :::: ::::::::::::::: gi|628 ASASDVHGNFAFEGIGDEDL 460 470 502 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 17:07:55 2009 done: Thu Mar 12 17:15:01 2009 Total Scan time: 954.690 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]