# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj03270.fasta.nr -Q ../query/mKIAA0064.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0064, 502 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7920411 sequences
Expectation_n fit: rho(ln(x))= 5.0467+/-0.000185; mu= 12.3583+/- 0.010
mean_var=71.2809+/-13.822, 0's: 30 Z-trim: 38 B-trim: 0 in 0/65
Lambda= 0.151910
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|108860975|sp|Q8BVL3.2|SNX17_MOUSE RecName: Full ( 470) 3044 676.3 4.9e-192
gi|26346711|dbj|BAC37004.1| unnamed protein produc ( 470) 3039 675.2 1e-191
gi|109102441|ref|XP_001089913.1| PREDICTED: sortin ( 500) 3029 673.0 5e-191
gi|114576791|ref|XP_515357.2| PREDICTED: sorting n ( 520) 3025 672.2 9.4e-191
gi|81884652|sp|Q6AYS6.1|SNX17_RAT RecName: Full=So ( 470) 3017 670.4 2.9e-190
gi|149727680|ref|XP_001502367.1| PREDICTED: simila ( 470) 3003 667.3 2.5e-189
gi|30583777|gb|AAP36137.1| Homo sapiens sorting ne ( 471) 3002 667.1 2.9e-189
gi|75057917|sp|Q5EA77.1|SNX17_BOVIN RecName: Full= ( 470) 3001 666.9 3.3e-189
gi|73979956|ref|XP_540126.2| PREDICTED: similar to ( 470) 3000 666.6 3.9e-189
gi|62896645|dbj|BAD96263.1| sorting nexin 17 varia ( 470) 2996 665.8 7.1e-189
gi|75040924|sp|Q5R4A5.1|SNX17_PONAB RecName: Full= ( 470) 2987 663.8 2.8e-188
gi|126303084|ref|XP_001371143.1| PREDICTED: simila ( 470) 2919 648.9 8.6e-184
gi|194391362|dbj|BAG60799.1| unnamed protein produ ( 450) 2864 636.8 3.5e-180
gi|194373727|dbj|BAG56959.1| unnamed protein produ ( 440) 2801 623.0 5e-176
gi|194390388|dbj|BAG61930.1| unnamed protein produ ( 458) 2703 601.5 1.5e-169
gi|194385166|dbj|BAG60989.1| unnamed protein produ ( 445) 2690 598.7 1.1e-168
gi|73979968|ref|XP_860993.1| PREDICTED: similar to ( 403) 2533 564.2 2.2e-158
gi|118089103|ref|XP_419999.2| PREDICTED: similar t ( 456) 2504 557.9 2e-156
gi|224048992|ref|XP_002188500.1| PREDICTED: simila ( 503) 2503 557.7 2.5e-156
gi|213624609|gb|AAI71334.1| Unknown (protein for M ( 467) 2502 557.5 2.8e-156
gi|48735073|gb|AAH72328.1| MGC83142 protein [Xenop ( 467) 2484 553.6 4.3e-155
gi|194386030|dbj|BAG59579.1| unnamed protein produ ( 388) 2458 547.8 1.9e-153
gi|28175281|gb|AAH45228.1| Snx17-prov protein [Xen ( 467) 2442 544.4 2.5e-152
gi|190338213|gb|AAI62993.1| Snx17 protein [Danio r ( 472) 2436 543.0 6.3e-152
gi|82078448|sp|Q5RID7.1|SNX17_DANRE RecName: Full= ( 473) 2424 540.4 3.9e-151
gi|47498024|ref|NP_998873.1| hypothetical protein ( 443) 2164 483.4 5.3e-134
gi|194374035|dbj|BAG62330.1| unnamed protein produ ( 329) 2077 464.2 2.3e-128
gi|73979952|ref|XP_860740.1| PREDICTED: similar to ( 256) 1637 367.7 2e-99
gi|119620989|gb|EAX00584.1| sorting nexin 17, isof ( 256) 1634 367.1 3.2e-99
gi|221046134|dbj|BAH14744.1| unnamed protein produ ( 256) 1625 365.1 1.3e-98
gi|210093091|gb|EEA41301.1| hypothetical protein B ( 400) 1521 342.5 1.3e-91
gi|189233693|ref|XP_969378.2| PREDICTED: similar t ( 466) 1336 302.0 2.3e-79
gi|156216230|gb|EDO37172.1| predicted protein [Nem ( 435) 1328 300.2 7.5e-79
gi|212518709|gb|EEB20430.1| Sorting nexin-17, puta ( 489) 1316 297.6 5.1e-78
gi|73979966|ref|XP_860964.1| PREDICTED: similar to ( 266) 1282 289.9 5.5e-76
gi|115655486|ref|XP_795102.2| PREDICTED: hypotheti (1139) 1271 288.0 9e-75
gi|157014655|gb|EAA12955.4| AGAP011491-PA [Anophel ( 499) 1221 276.8 9.5e-72
gi|108877271|gb|EAT41496.1| sorting nexin [Aedes a ( 495) 1191 270.2 9e-70
gi|47224270|emb|CAG09116.1| unnamed protein produc ( 524) 1178 267.4 6.8e-69
gi|167879492|gb|EDS42875.1| sorting nexin [Culex q ( 466) 1124 255.5 2.3e-65
gi|156551421|ref|XP_001604143.1| PREDICTED: simila ( 484) 1116 253.8 7.9e-65
gi|210113246|gb|EEA61016.1| hypothetical protein B ( 430) 1070 243.6 7.8e-62
gi|119612218|gb|EAW91812.1| hypothetical protein M ( 440) 1062 241.9 2.7e-61
gi|119612219|gb|EAW91813.1| hypothetical protein M ( 439) 1061 241.7 3.1e-61
gi|114621148|ref|XP_001153193.1| PREDICTED: hypoth ( 440) 1058 241.0 4.9e-61
gi|222537716|ref|NP_689841.3| sorting nexin 31 [Ho ( 440) 1056 240.6 6.6e-61
gi|187611509|sp|Q8N9S9.2|SNX31_HUMAN RecName: Full ( 440) 1050 239.3 1.6e-60
gi|21752862|dbj|BAC04249.1| unnamed protein produc ( 440) 1050 239.3 1.6e-60
gi|73974254|ref|XP_848854.1| PREDICTED: similar to ( 402) 1030 234.8 3.2e-59
gi|26329777|dbj|BAC28627.1| unnamed protein produc ( 438) 1025 233.8 7.3e-59
>>gi|108860975|sp|Q8BVL3.2|SNX17_MOUSE RecName: Full=Sor (470 aa)
initn: 3044 init1: 3044 opt: 3044 Z-score: 3604.0 bits: 676.3 E(): 4.9e-192
Smith-Waterman score: 3044; 100.000% identity (100.000% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|108 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|108 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
::::::::::::::::::::
gi|108 ASASAVHGNFAFEGIGDEDL
460 470
>>gi|26346711|dbj|BAC37004.1| unnamed protein product [M (470 aa)
initn: 3039 init1: 3039 opt: 3039 Z-score: 3598.1 bits: 675.2 E(): 1e-191
Smith-Waterman score: 3039; 99.787% identity (100.000% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|263 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
gi|263 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYEIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
::::::::::::::::::::
gi|263 ASASAVHGNFAFEGIGDEDL
460 470
>>gi|109102441|ref|XP_001089913.1| PREDICTED: sorting ne (500 aa)
initn: 3022 init1: 3022 opt: 3029 Z-score: 3585.9 bits: 673.0 E(): 5e-191
Smith-Waterman score: 3029; 95.344% identity (97.571% similar) in 494 aa overlap (9-502:11-500)
10 20 30 40 50
mKIAA0 KWRAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIH
::: : .. :: . :.::::::::::::::::::::::::::::
gi|109 MPGLLPAEGERAEPLRPSQSGAR----LGRAVGNMHFSIPETESRSGDSGGSAYVAYNIH
10 20 30 40 50
60 70 80 90 100 110
mKIAA0 VNGVLHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAV
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
gi|109 VNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAV
60 70 80 90 100 110
120 130 140 150 160 170
mKIAA0 RQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAV
::::::::::::::::::::::::::::::::::::::::::::..::::::::::::::
gi|109 RQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLINVLTSDQTEDVLEAV
120 130 140 150 160 170
180 190 200 210 220 230
mKIAA0 AAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 AAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYW
180 190 200 210 220 230
240 250 260 270 280 290
mKIAA0 DSAYDDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTL
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
gi|109 DSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTL
240 250 260 270 280 290
300 310 320 330 340 350
mKIAA0 RHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSS
300 310 320 330 340 350
360 370 380 390 400 410
mKIAA0 VPLPSGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVK
::::::.::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVK
360 370 380 390 400 410
420 430 440 450 460 470
mKIAA0 KSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGS
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|109 KSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGS
420 430 440 450 460 470
480 490 500
mKIAA0 PSTDASASAVHGNFAFEGIGDEDL
:::::::: :::::::::::::::
gi|109 PSTDASASDVHGNFAFEGIGDEDL
480 490 500
>>gi|114576791|ref|XP_515357.2| PREDICTED: sorting nexin (520 aa)
initn: 3018 init1: 3018 opt: 3025 Z-score: 3580.9 bits: 672.2 E(): 9.4e-191
Smith-Waterman score: 3025; 95.344% identity (97.368% similar) in 494 aa overlap (9-502:31-520)
10 20 30
mKIAA0 KWRAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIP
::: : .. :: :.::::::::
gi|114 MGPRAPPRTTGCNEGQLHFGLPFRTAAEGERAEPLRPSQSGARP----CRAVGNMHFSIP
10 20 30 40 50
40 50 60 70 80 90
mKIAA0 ETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFS
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
gi|114 ETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS
60 70 80 90 100 110
100 110 120 130 140 150
mKIAA0 LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNG
120 130 140 150 160 170
160 170 180 190 200 210
mKIAA0 QKVLVTVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPY
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 QKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPY
180 190 200 210 220 230
220 230 240 250 260 270
mKIAA0 VSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQ
::::::::.::::::::::::::::::::::::::::::::::::::.::::::::::::
gi|114 VSVTSLRSKEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQ
240 250 260 270 280 290
280 290 300 310 320 330
mKIAA0 LKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQ
300 310 320 330 340 350
340 350 360 370 380 390
mKIAA0 QLREGSFRVTRMRCWRVTSSVPLPSGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITS
::::::::::::::::::::::::::.::::.::::::::::::::::::::::::::::
gi|114 QLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITS
360 370 380 390 400 410
400 410 420 430 440 450
mKIAA0 PQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|114 PQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATR
420 430 440 450 460 470
460 470 480 490 500
mKIAA0 ESMVKLSSKLSAVSLRGIGSPSTDASASAVHGNFAFEGIGDEDL
:::::::::::::::::::::::::::: :::::::::::::::
gi|114 ESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL
480 490 500 510 520
>>gi|81884652|sp|Q6AYS6.1|SNX17_RAT RecName: Full=Sortin (470 aa)
initn: 3017 init1: 3017 opt: 3017 Z-score: 3572.0 bits: 670.4 E(): 2.9e-190
Smith-Waterman score: 3017; 98.723% identity (100.000% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::.:::::::::::
gi|818 MHFSIPETESRSGDSGGSTYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|818 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
::::::::::::::::::::::::::::::::::.::::::.::::::::::::::::::
gi|818 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSDGQKVLVNVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SGGTSTPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SIRKMLRRRVGGNLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
::::::::::::::::::::
gi|818 ASASAVHGNFAFEGIGDEDL
460 470
>>gi|149727680|ref|XP_001502367.1| PREDICTED: similar to (470 aa)
initn: 3003 init1: 3003 opt: 3003 Z-score: 3555.5 bits: 667.3 E(): 2.5e-189
Smith-Waterman score: 3003; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|149 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|149 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|149 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVSVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
gi|149 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 SGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
:::::::::::::::.::::::::::::::::::::::.:::::::::::::::::::::
gi|149 SIRKMLRRRVGGTLRHSDSQQAVKSPPLLESPDASRESIVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
:::: :::::::::::::::
gi|149 ASASDVHGNFAFEGIGDEDL
460 470
>>gi|30583777|gb|AAP36137.1| Homo sapiens sorting nexin (471 aa)
initn: 3002 init1: 3002 opt: 3002 Z-score: 3554.3 bits: 667.1 E(): 2.9e-189
Smith-Waterman score: 3002; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|305 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|305 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|305 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|305 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
gi|305 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|305 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
::.::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|305 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|305 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
:::: :::::::::::::::
gi|305 ASASDVHGNFAFEGIGDEDLL
460 470
>>gi|75057917|sp|Q5EA77.1|SNX17_BOVIN RecName: Full=Sort (470 aa)
initn: 3001 init1: 3001 opt: 3001 Z-score: 3553.1 bits: 666.9 E(): 3.3e-189
Smith-Waterman score: 3001; 98.298% identity (99.787% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|750 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|750 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|750 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|750 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
:::::::::::::::::::.:::.::::::::::::::::::::::::::::::::::::
gi|750 DDDVMENRVGLNLLYAQTVADIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|750 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|750 SGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.::
gi|750 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGTPGTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
:::: :::::::::::::::
gi|750 ASASDVHGNFAFEGIGDEDL
460 470
>>gi|73979956|ref|XP_540126.2| PREDICTED: similar to Sor (470 aa)
initn: 3000 init1: 3000 opt: 3000 Z-score: 3551.9 bits: 666.6 E(): 3.9e-189
Smith-Waterman score: 3000; 98.511% identity (99.787% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|739 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|739 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|739 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|739 DLPDDLIGYFSLFLVREKEDGTFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
gi|739 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
::.::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
:::: :::::::::::::::
gi|739 ASASDVHGNFAFEGIGDEDL
460 470
>>gi|62896645|dbj|BAD96263.1| sorting nexin 17 variant [ (470 aa)
initn: 2996 init1: 2996 opt: 2996 Z-score: 3547.2 bits: 665.8 E(): 7.1e-189
Smith-Waterman score: 2996; 98.298% identity (99.787% similar) in 470 aa overlap (33-502:1-470)
10 20 30 40 50 60
mKIAA0 RAGLRRRAEWQRQASRGAANLVVRSSALGNMHFSIPETESRSGDSGGSAYVAYNIHVNGV
::::::::::::::::::::::::::::::
gi|628 MHFSIPETESRSGDSGGSAYVAYNIHVNGV
10 20 30
70 80 90 100 110 120
mKIAA0 LHCRVRYSQLLGLHEQLRKEYGANVVPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|628 LHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDP
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVTVLTSDQTEDVLEAVAAKL
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|628 LLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKL
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|628 DLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAY
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 DDDVMENRVGLNLLYAQTVSDIEHGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
gi|628 DDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|628 YLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLP
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 SGGTSSPSRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
::.::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|628 SGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGG
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGSPSTD
::::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::::
gi|628 SIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESVVKLSSKLSAVSLRGIGSPSTD
400 410 420 430 440 450
490 500
mKIAA0 ASASAVHGNFAFEGIGDEDL
:::: :::::::::::::::
gi|628 ASASDVHGNFAFEGIGDEDL
460 470
502 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Thu Mar 12 17:07:55 2009 done: Thu Mar 12 17:15:01 2009
Total Scan time: 954.690 Total Display time: 0.140
Function used was FASTA [version 34.26.5 April 26, 2007]