# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj02918.fasta.nr -Q ../query/mFLJ00052.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00052, 364 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917722 sequences Expectation_n fit: rho(ln(x))= 6.5251+/-0.000205; mu= 5.3526+/- 0.011 mean_var=140.3418+/-27.102, 0's: 38 Z-trim: 53 B-trim: 175 in 1/64 Lambda= 0.108263 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109496051|ref|XP_341093.3| PREDICTED: similar t ( 862) 2164 349.4 1.7e-93 gi|68053214|sp|Q8BR65.1|SDS3_MOUSE RecName: Full=S ( 328) 2132 344.0 2.7e-92 gi|109098940|ref|XP_001084823.1| PREDICTED: simila ( 407) 2129 343.6 4.4e-92 gi|26335815|dbj|BAC31608.1| unnamed protein produc ( 328) 2126 343.0 5.2e-92 gi|10440434|dbj|BAB15750.1| FLJ00052 protein [Homo ( 368) 2123 342.6 7.8e-92 gi|20502870|gb|AAM22676.1|AF469109_1 SDS3 [Mus mus ( 328) 2122 342.4 8e-92 gi|114647229|ref|XP_509415.2| PREDICTED: similar t ( 407) 2123 342.6 8.4e-92 gi|38565990|gb|AAH62176.1| Suds3 protein [Mus musc ( 332) 2117 341.6 1.4e-91 gi|194042976|ref|XP_001924353.1| PREDICTED: simila ( 405) 2118 341.9 1.4e-91 gi|148687874|gb|EDL19821.1| RIKEN cDNA 2400003N08, ( 330) 2112 340.8 2.4e-91 gi|148687872|gb|EDL19819.1| RIKEN cDNA 2400003N08, ( 334) 2097 338.5 1.2e-90 gi|68053233|sp|Q9H7L9.2|SDS3_HUMAN RecName: Full=S ( 328) 2092 337.7 2.1e-90 gi|149063516|gb|EDM13839.1| similar to FLJ00052 pr ( 331) 2091 337.6 2.3e-90 gi|194214254|ref|XP_001914936.1| PREDICTED: simila ( 406) 2088 337.2 3.7e-90 gi|75042006|sp|Q5RBB8.1|SDS3_PONAB RecName: Full=S ( 328) 2086 336.8 4e-90 gi|172048634|sp|A6H6W9.1|SDS3_BOVIN RecName: Full= ( 328) 2086 336.8 4e-90 gi|73995289|ref|XP_543419.2| PREDICTED: similar to ( 434) 2084 336.6 6e-90 gi|149063515|gb|EDM13838.1| similar to FLJ00052 pr ( 335) 2076 335.2 1.2e-89 gi|119618547|gb|EAW98141.1| suppressor of defectiv ( 328) 2075 335.1 1.3e-89 gi|126324676|ref|XP_001362875.1| PREDICTED: simila ( 327) 2040 329.6 5.7e-88 gi|119618546|gb|EAW98140.1| suppressor of defectiv ( 317) 1937 313.5 3.9e-83 gi|53136632|emb|CAG32645.1| hypothetical protein [ ( 313) 1882 304.9 1.5e-80 gi|50418319|gb|AAH77985.1| MGC81661 protein [Xenop ( 321) 1846 299.3 7.5e-79 gi|49899079|gb|AAH76807.1| MGC83759 protein [Xenop ( 321) 1840 298.3 1.4e-78 gi|220679403|emb|CAX14305.1| suppressor of defecti ( 318) 1811 293.8 3.3e-77 gi|90075564|dbj|BAE87462.1| unnamed protein produc ( 292) 1810 293.6 3.5e-77 gi|156230905|gb|AAI52171.1| Suds3 protein [Danio r ( 310) 1808 293.3 4.5e-77 gi|49619047|gb|AAT68108.1| suppressor of defective ( 317) 1785 289.7 5.5e-76 gi|50417018|gb|AAH78355.1| Suppressor of defective ( 318) 1785 289.7 5.5e-76 gi|220679404|emb|CAX14306.1| suppressor of defecti ( 326) 1785 289.8 5.6e-76 gi|197631943|gb|ACH70695.1| suppressor of defectiv ( 311) 1755 285.1 1.4e-74 gi|119618543|gb|EAW98137.1| suppressor of defectiv ( 302) 1300 214.0 3.4e-53 gi|148687873|gb|EDL19820.1| RIKEN cDNA 2400003N08, ( 202) 1284 211.3 1.4e-52 gi|119618545|gb|EAW98139.1| suppressor of defectiv ( 207) 1283 211.2 1.6e-52 gi|149063514|gb|EDM13837.1| similar to FLJ00052 pr ( 202) 1269 209.0 7.3e-52 gi|85700307|gb|AAI12001.1| SUDS3 protein [Homo sap ( 184) 1200 198.1 1.2e-48 gi|47221504|emb|CAG08166.1| unnamed protein produc ( 337) 1198 198.1 2.3e-48 gi|62739853|gb|AAH93990.1| SUDS3 protein [Homo sap ( 169) 1114 184.7 1.2e-44 gi|10435847|dbj|BAB14685.1| unnamed protein produc ( 169) 1108 183.7 2.4e-44 gi|66514190|ref|XP_393483.2| PREDICTED: similar to ( 326) 1085 180.4 4.6e-43 gi|210092978|gb|EEA41191.1| hypothetical protein B ( 284) 1061 176.6 5.6e-42 gi|20988049|gb|AAH30252.1| SUDS3 protein [Homo sap ( 165) 1044 173.7 2.4e-41 gi|210116637|gb|EEA64380.1| hypothetical protein B ( 283) 1014 169.3 9e-40 gi|156223758|gb|EDO44590.1| predicted protein [Nem ( 399) 1001 167.4 4.7e-39 gi|212510957|gb|EEB14037.1| Sin3 histone deacetyla ( 318) 990 165.6 1.3e-38 gi|119570782|gb|EAW50397.1| hCG1746602, isoform CR ( 175) 853 143.9 2.4e-32 gi|91093166|ref|XP_967616.1| PREDICTED: similar to ( 326) 839 142.0 1.7e-31 gi|221114061|ref|XP_002158878.1| PREDICTED: hypoth ( 362) 822 139.4 1.1e-30 gi|198415295|ref|XP_002130717.1| PREDICTED: simila ( 299) 749 127.9 2.7e-27 gi|157018587|gb|EAL41125.3| AGAP000738-PA [Anophel ( 318) 736 125.9 1.2e-26 >>gi|109496051|ref|XP_341093.3| PREDICTED: similar to Si (862 aa) initn: 2150 init1: 2150 opt: 2164 Z-score: 1834.9 bits: 349.4 E(): 1.7e-93 Smith-Waterman score: 2164; 92.582% identity (94.780% similar) in 364 aa overlap (1-364:500-862) 10 20 30 mFLJ00 PGARGSEPREVAGLRGRSQAAAISAGPAPP ::.::: . :: : . .. : gi|109 RAAYDPEVARCARPPLPSAGAGGGARRRGRPGVRGSGCARW-GLSGAQPGGRDLRGTRSA 470 480 490 500 510 520 40 50 60 70 80 90 mFLJ00 RPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEELESAEDDERSCRGRESDEDTEDASE ::::::::::::::::::::: ::::::::.:::::.::::::::::::::::::::: gi|109 AARGGDMSAAGLLAPAPAPAAAPPAPEYYPEDDEELESVEDDERSCRGRESDEDTEDASE 530 540 550 560 570 580 100 110 120 130 140 150 mFLJ00 TDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAE 590 600 610 620 630 640 160 170 180 190 200 210 mFLJ00 LFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDS 650 660 670 680 690 700 220 230 240 250 260 270 mFLJ00 MEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPAS 710 720 730 740 750 760 280 290 300 310 320 330 mFLJ00 PSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGA 770 780 790 800 810 820 340 350 360 mFLJ00 NEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::.:::::::::::::::: gi|109 NEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 830 840 850 860 >>gi|68053214|sp|Q8BR65.1|SDS3_MOUSE RecName: Full=Sin3 (328 aa) initn: 2132 init1: 2132 opt: 2132 Z-score: 1813.2 bits: 344.0 E(): 2.7e-92 Smith-Waterman score: 2132; 100.000% identity (100.000% similar) in 328 aa overlap (37-364:1-328) 10 20 30 40 50 60 mFLJ00 EPREVAGLRGRSQAAAISAGPAPPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEEL :::::::::::::::::::::::::::::: gi|680 MSAAGLLAPAPAPAAAPAAPEYYPEDEEEL 10 20 30 70 80 90 100 110 120 mFLJ00 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|109098940|ref|XP_001084823.1| PREDICTED: similar to (407 aa) initn: 2113 init1: 2113 opt: 2129 Z-score: 1809.5 bits: 343.6 E(): 4.4e-92 Smith-Waterman score: 2129; 90.541% identity (93.784% similar) in 370 aa overlap (2-364:42-407) 10 20 mFLJ00 PGARGSE---PREVAGLRGRSQAAAISAGPA :.:.: :: . : : .:. : . gi|109 DPEVARGARPRLPSAGAGGGARRRPGRGRRGSRSSSWGLPRTLLGRRRVPKAG----GRG 20 30 40 50 60 30 40 50 60 70 80 mFLJ00 PPRPRG----GDMSAAGLLAPAPAPAAAPAAPEYYPEDEEELESAEDDERSCRGRESDED : ::. :::::::::::::: :.:: :::::::..::::::::::::::::::::: gi|109 VPGPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDED 70 80 90 100 110 120 90 100 110 120 130 140 mFLJ00 TEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 TEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKE 130 140 150 160 170 180 150 160 170 180 190 200 mFLJ00 RIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTM 190 200 210 220 230 240 210 220 230 240 250 260 mFLJ00 ELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKS 250 260 270 280 290 300 270 280 290 300 310 320 mFLJ00 PKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCV 310 320 330 340 350 360 330 340 350 360 mFLJ00 ISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::::::::.:::::::::::::::: gi|109 ISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 370 380 390 400 >>gi|26335815|dbj|BAC31608.1| unnamed protein product [M (328 aa) initn: 2126 init1: 2126 opt: 2126 Z-score: 1808.2 bits: 343.0 E(): 5.2e-92 Smith-Waterman score: 2126; 99.695% identity (100.000% similar) in 328 aa overlap (37-364:1-328) 10 20 30 40 50 60 mFLJ00 EPREVAGLRGRSQAAAISAGPAPPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEEL :::::::::::::::::::::::::::::: gi|263 MSAAGLLAPAPAPAAAPAAPEYYPEDEEEL 10 20 30 70 80 90 100 110 120 mFLJ00 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|263 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDNKVELKENL 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|10440434|dbj|BAB15750.1| FLJ00052 protein [Homo sap (368 aa) initn: 2110 init1: 2110 opt: 2123 Z-score: 1805.0 bits: 342.6 E(): 7.8e-92 Smith-Waterman score: 2123; 91.008% identity (94.278% similar) in 367 aa overlap (2-364:3-368) 10 20 30 40 50 mFLJ00 PGARGSE---PREVAGLRGRSQAAAISA-GPAPPRPRGGDMSAAGLLAPAPAPAAAPAA : :.: :: . : : .:.. .. :: :: ::::::::::::: :.:: : gi|104 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVRGPRSAAVRG-DMSAAGLLAPAPAQAGAPPA 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 PEYYPEDEEELESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLAS ::::::..:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 PEYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLAS 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 LKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEF :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|104 LKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEF 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 EDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKR 180 190 200 210 220 230 240 250 260 270 280 290 mFLJ00 RKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 RKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIED 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 GKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGL ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|104 GKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGL 300 310 320 330 340 350 360 mFLJ00 FVIRRRSAA ::::::::: gi|104 FVIRRRSAA 360 >>gi|20502870|gb|AAM22676.1|AF469109_1 SDS3 [Mus musculu (328 aa) initn: 2122 init1: 2122 opt: 2122 Z-score: 1804.8 bits: 342.4 E(): 8e-92 Smith-Waterman score: 2122; 99.695% identity (99.695% similar) in 328 aa overlap (37-364:1-328) 10 20 30 40 50 60 mFLJ00 EPREVAGLRGRSQAAAISAGPAPPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEEL :::::::::::::::::::::::::::::: gi|205 MSAAGLLAPAPAPAAAPAAPEYYPEDEEEL 10 20 30 70 80 90 100 110 120 mFLJ00 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|205 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLWRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|114647229|ref|XP_509415.2| PREDICTED: similar to FL (407 aa) initn: 2110 init1: 2110 opt: 2123 Z-score: 1804.5 bits: 342.6 E(): 8.4e-92 Smith-Waterman score: 2123; 91.008% identity (94.278% similar) in 367 aa overlap (2-364:42-407) 10 20 mFLJ00 PGARGSE---PREVAGLRGRSQAAAISA-GP : :.: :: . : : .:.. .. :: gi|114 DPEVARGARPPLPSAGAGGGARRRRGRGRRGCRSSSWGLPRTLLGRRRVPSAGGRGVRGP 20 30 40 50 60 70 30 40 50 60 70 80 mFLJ00 APPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEELESAEDDERSCRGRESDEDTED :: ::::::::::::: :.:: :::::::..:::::::::::::::::::::::: gi|114 RSAAVRG-DMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTED 80 90 100 110 120 130 90 100 110 120 130 140 mFLJ00 ASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|114 ASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIR 140 150 160 170 180 190 150 160 170 180 190 200 mFLJ00 NAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELT 200 210 220 230 240 250 210 220 230 240 250 260 mFLJ00 GDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKR 260 270 280 290 300 310 270 280 290 300 310 320 mFLJ00 PASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISS 320 330 340 350 360 370 330 340 350 360 mFLJ00 VGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA ::::::::::::::::::::.:::::::::::::::: gi|114 VGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 380 390 400 >>gi|38565990|gb|AAH62176.1| Suds3 protein [Mus musculus (332 aa) initn: 2117 init1: 2117 opt: 2117 Z-score: 1800.5 bits: 341.6 E(): 1.4e-91 Smith-Waterman score: 2117; 100.000% identity (100.000% similar) in 325 aa overlap (37-361:1-325) 10 20 30 40 50 60 mFLJ00 EPREVAGLRGRSQAAAISAGPAPPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEEL :::::::::::::::::::::::::::::: gi|385 MSAAGLLAPAPAPAAAPAAPEYYPEDEEEL 10 20 30 70 80 90 100 110 120 mFLJ00 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRKFLTY 280 290 300 310 320 330 gi|385 RD >>gi|194042976|ref|XP_001924353.1| PREDICTED: similar to (405 aa) initn: 2060 init1: 2060 opt: 2118 Z-score: 1800.3 bits: 341.9 E(): 1.4e-91 Smith-Waterman score: 2118; 90.296% identity (93.261% similar) in 371 aa overlap (2-364:39-405) 10 20 mFLJ00 PGARGSE------PREVAGLRGRSQAAAISA : :::. :: . : :: .:. . gi|194 AGRDPEVAAGARPPLPGAGARGGVWRRQRRGRRGSRSTGRRLPRALLGRRGVRRAG--DR 10 20 30 40 50 60 30 40 50 60 70 80 mFLJ00 GPAPPRPRGG--DMSAAGLLAPAPAPAAAPAAPEYYPEDEEELESAEDDERSCRGRESDE :: : .: ::::::::::::: .:: :::::::..:::::::::::::::::::: gi|194 GPQLARSTAGRVDMSAAGLLAPAPA--GAPPAPEYYPEEDEELESAEDDERSCRGRESDE 70 80 90 100 110 120 90 100 110 120 130 140 mFLJ00 DTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|194 DTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYK 130 140 150 160 170 180 150 160 170 180 190 200 mFLJ00 ERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLT 190 200 210 220 230 240 210 220 230 240 250 260 mFLJ00 MELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLK 250 260 270 280 290 300 270 280 290 300 310 320 mFLJ00 SPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSC 310 320 330 340 350 360 330 340 350 360 mFLJ00 VISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA ::::::::::::::::::::::::.:::::::::::::::: gi|194 VISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 370 380 390 400 >>gi|148687874|gb|EDL19821.1| RIKEN cDNA 2400003N08, iso (330 aa) initn: 2113 init1: 1319 opt: 2112 Z-score: 1796.3 bits: 340.8 E(): 2.4e-91 Smith-Waterman score: 2112; 99.091% identity (99.091% similar) in 330 aa overlap (37-364:1-330) 10 20 30 40 50 60 mFLJ00 EPREVAGLRGRSQAAAISAGPAPPRPRGGDMSAAGLLAPAPAPAAAPAAPEYYPEDEEEL :::::::::::::::::::::::::::::: gi|148 MSAAGLLAPAPAPAAAPAAPEYYPEDEEEL 10 20 30 70 80 90 100 110 120 mFLJ00 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAP--AQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|148 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPDIPQLN 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 YLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRW 220 230 240 250 260 270 310 320 330 340 350 360 mFLJ00 YHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYVGQLQRGLFVIRRRSAA 280 290 300 310 320 330 364 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:29:51 2009 done: Thu Mar 12 14:35:58 2009 Total Scan time: 841.130 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]