# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj02080.fasta.nr -Q ../query/mKIAA0731.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0731, 364 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919101 sequences Expectation_n fit: rho(ln(x))= 5.6365+/-0.00019; mu= 8.8473+/- 0.011 mean_var=91.4570+/-17.518, 0's: 41 Z-trim: 47 B-trim: 52 in 1/67 Lambda= 0.134111 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148675830|gb|EDL07777.1| mCG23048 [Mus musculus ( 977) 2520 497.6 4.5e-138 gi|147744571|sp|Q6ZQ58.2|LARP1_MOUSE RecName: Full (1072) 2520 497.7 4.8e-138 gi|94390383|ref|XP_910122.2| PREDICTED: similar to (1144) 2520 497.7 5e-138 gi|149261894|ref|XP_126172.6| PREDICTED: la relate (1339) 2520 497.7 5.7e-138 gi|149052690|gb|EDM04507.1| La ribonucleoprotein d ( 894) 2492 492.2 1.8e-136 gi|109490767|ref|XP_001075150.1| PREDICTED: simila (1034) 2492 492.2 2e-136 gi|109488127|ref|XP_220446.4| PREDICTED: similar t (1124) 2492 492.3 2.1e-136 gi|194219674|ref|XP_001917577.1| PREDICTED: La rib (1037) 2440 482.2 2.1e-133 gi|73953604|ref|XP_867287.1| PREDICTED: similar to ( 749) 2437 481.5 2.5e-133 gi|73953606|ref|XP_853394.1| PREDICTED: similar to ( 895) 2437 481.5 2.8e-133 gi|119582036|gb|EAW61632.1| La ribonucleoprotein d ( 891) 2415 477.3 5.4e-132 gi|38014963|gb|AAH01460.2| La ribonucleoprotein do (1019) 2415 477.3 6e-132 gi|73621135|sp|Q6PKG0.2|LARP1_HUMAN RecName: Full= (1096) 2415 477.4 6.3e-132 gi|6453438|emb|CAB61364.1| hypothetical protein [H ( 559) 2411 476.3 6.5e-132 gi|194669017|ref|XP_582017.4| PREDICTED: similar t (1274) 2409 476.2 1.6e-131 gi|114603047|ref|XP_518174.2| PREDICTED: la relate (1442) 2407 475.9 2.3e-131 gi|119582037|gb|EAW61633.1| La ribonucleoprotein d (1158) 2403 475.0 3.3e-131 gi|109079490|ref|XP_001112018.1| PREDICTED: simila ( 885) 2399 474.2 4.6e-131 gi|109079486|ref|XP_001112050.1| PREDICTED: simila (1021) 2399 474.2 5.1e-131 gi|109079488|ref|XP_001111830.1| PREDICTED: simila ( 935) 2297 454.5 4.2e-125 gi|126291334|ref|XP_001379459.1| PREDICTED: simila (1032) 2237 442.9 1.4e-121 gi|149412576|ref|XP_001507827.1| PREDICTED: simila (1198) 2185 432.9 1.7e-118 gi|118097432|ref|XP_414577.2| PREDICTED: hypotheti (1211) 2156 427.3 8.3e-117 gi|197245648|gb|AAI68570.1| Unknown (protein for M (1012) 2042 405.2 3.2e-110 gi|62471513|gb|AAH93491.1| MGC98945 protein [Xenop (1021) 2041 405.0 3.7e-110 gi|21707496|gb|AAH33856.1| LARP1 protein [Homo sap ( 283) 1871 371.6 1.1e-100 gi|126330598|ref|XP_001365105.1| PREDICTED: simila ( 947) 1769 352.3 2.4e-94 gi|73984077|ref|XP_533293.2| PREDICTED: similar to ( 926) 1679 334.9 4.1e-89 gi|149698404|ref|XP_001501761.1| PREDICTED: simila ( 924) 1664 332.0 3.1e-88 gi|109075640|ref|XP_001082449.1| PREDICTED: simila ( 914) 1633 326.0 1.9e-86 gi|114595993|ref|XP_517433.2| PREDICTED: La ribonu (1089) 1629 325.3 3.8e-86 gi|52545644|emb|CAH56379.1| hypothetical protein [ ( 897) 1622 323.9 8.4e-86 gi|119625590|gb|EAX05185.1| La ribonucleoprotein d ( 901) 1622 323.9 8.4e-86 gi|119625589|gb|EAX05184.1| La ribonucleoprotein d ( 914) 1622 323.9 8.5e-86 gi|118089985|ref|XP_420465.2| PREDICTED: similar t (1027) 1620 323.5 1.2e-85 gi|158564329|sp|Q659C4.2|LARP2_HUMAN RecName: Full ( 914) 1612 321.9 3.3e-85 gi|224049246|ref|XP_002189005.1| PREDICTED: simila ( 994) 1580 315.8 2.5e-83 gi|183985708|gb|AAI66226.1| Larp2 protein [Xenopus ( 991) 1576 315.0 4.3e-83 gi|126631665|gb|AAI34188.1| Wu:fc76b04 protein [Da ( 523) 1570 313.6 6e-83 gi|189441646|gb|AAI67437.1| Wu:fc76b04 protein [Da ( 600) 1570 313.6 6.6e-83 gi|134024835|gb|AAI34816.1| LOC100049139 protein [ ( 934) 1570 313.8 9.2e-83 gi|68387703|ref|XP_696560.1| PREDICTED: wu:fc76b04 (1076) 1570 313.9 1e-82 gi|71051890|gb|AAH99357.1| Unknown (protein for IM ( 557) 1540 307.8 3.5e-81 gi|68534580|gb|AAH98998.1| MGC115226 protein [Xeno ( 926) 1529 305.9 2.2e-80 gi|31873973|emb|CAD97908.1| hypothetical protein [ ( 281) 1491 298.1 1.5e-78 gi|210084279|gb|EEA32814.1| hypothetical protein B ( 774) 1403 281.4 4.3e-73 gi|210131455|gb|EEA79123.1| hypothetical protein B (1017) 1400 280.9 7.9e-73 gi|189534440|ref|XP_001920902.1| PREDICTED: La rib ( 900) 1302 261.9 3.7e-67 gi|115725143|ref|XP_781138.2| PREDICTED: hypotheti (1643) 1271 256.2 3.7e-65 gi|156545802|ref|XP_001605854.1| PREDICTED: simila ( 993) 1229 247.8 7e-63 >>gi|148675830|gb|EDL07777.1| mCG23048 [Mus musculus] (977 aa) initn: 2520 init1: 2520 opt: 2520 Z-score: 2635.2 bits: 497.6 E(): 4.5e-138 Smith-Waterman score: 2520; 100.000% identity (100.000% similar) in 364 aa overlap (1-364:614-977) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|148 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 590 600 610 620 630 640 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR 650 660 670 680 690 700 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 710 720 730 740 750 760 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 770 780 790 800 810 820 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 830 840 850 860 870 880 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 890 900 910 920 930 940 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :::::::::::::::::::::::::::::::::: gi|148 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK 950 960 970 >>gi|147744571|sp|Q6ZQ58.2|LARP1_MOUSE RecName: Full=La- (1072 aa) initn: 2520 init1: 2520 opt: 2520 Z-score: 2634.7 bits: 497.7 E(): 4.8e-138 Smith-Waterman score: 2520; 100.000% identity (100.000% similar) in 364 aa overlap (1-364:709-1072) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|147 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 800 810 820 830 840 850 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 860 870 880 890 900 910 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 920 930 940 950 960 970 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 980 990 1000 1010 1020 1030 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :::::::::::::::::::::::::::::::::: gi|147 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK 1040 1050 1060 1070 >>gi|94390383|ref|XP_910122.2| PREDICTED: similar to La (1144 aa) initn: 2520 init1: 2520 opt: 2520 Z-score: 2634.3 bits: 497.7 E(): 5e-138 Smith-Waterman score: 2520; 100.000% identity (100.000% similar) in 364 aa overlap (1-364:781-1144) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|943 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 760 770 780 790 800 810 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR 820 830 840 850 860 870 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 880 890 900 910 920 930 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 940 950 960 970 980 990 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 1000 1010 1020 1030 1040 1050 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|943 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 1060 1070 1080 1090 1100 1110 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :::::::::::::::::::::::::::::::::: gi|943 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK 1120 1130 1140 >>gi|149261894|ref|XP_126172.6| PREDICTED: la related pr (1339 aa) initn: 2520 init1: 2520 opt: 2520 Z-score: 2633.4 bits: 497.7 E(): 5.7e-138 Smith-Waterman score: 2520; 100.000% identity (100.000% similar) in 364 aa overlap (1-364:976-1339) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|149 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 950 960 970 980 990 1000 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR 1010 1020 1030 1040 1050 1060 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 1070 1080 1090 1100 1110 1120 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 1130 1140 1150 1160 1170 1180 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 1190 1200 1210 1220 1230 1240 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 1250 1260 1270 1280 1290 1300 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :::::::::::::::::::::::::::::::::: gi|149 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK 1310 1320 1330 >>gi|149052690|gb|EDM04507.1| La ribonucleoprotein domai (894 aa) initn: 2605 init1: 2492 opt: 2492 Z-score: 2606.5 bits: 492.2 E(): 1.8e-136 Smith-Waterman score: 2492; 98.901% identity (99.451% similar) in 364 aa overlap (1-364:531-894) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS ::::::::::.::::::::::::::::::: gi|149 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRYQQVPTDALANKLFGAPEPS 510 520 530 540 550 560 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|149 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 570 580 590 600 610 620 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 630 640 650 660 670 680 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 690 700 710 720 730 740 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 750 760 770 780 790 800 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 810 820 830 840 850 860 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK ::::::::::::::::::::::::::.::::: : gi|149 ATGISQPPTTPTGQATREDAKWTSQHTDTLTLGK 870 880 890 >>gi|109490767|ref|XP_001075150.1| PREDICTED: similar to (1034 aa) initn: 2605 init1: 2492 opt: 2492 Z-score: 2605.6 bits: 492.2 E(): 2e-136 Smith-Waterman score: 2492; 98.901% identity (99.451% similar) in 364 aa overlap (1-364:671-1034) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS ::::::::::.::::::::::::::::::: gi|109 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRYQQVPTDALANKLFGAPEPS 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|109 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 770 780 790 800 810 820 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 830 840 850 860 870 880 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 890 900 910 920 930 940 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 950 960 970 980 990 1000 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK ::::::::::::::::::::::::::.::::: : gi|109 ATGISQPPTTPTGQATREDAKWTSQHTDTLTLGK 1010 1020 1030 >>gi|109488127|ref|XP_220446.4| PREDICTED: similar to la (1124 aa) initn: 2580 init1: 2492 opt: 2492 Z-score: 2605.1 bits: 492.3 E(): 2.1e-136 Smith-Waterman score: 2492; 98.901% identity (99.451% similar) in 364 aa overlap (1-364:761-1124) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS ::::::::::.::::::::::::::::::: gi|109 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRYQQVPTDALANKLFGAPEPS 740 750 760 770 780 790 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|109 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 800 810 820 830 840 850 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 860 870 880 890 900 910 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 920 930 940 950 960 970 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 980 990 1000 1010 1020 1030 280 290 300 310 320 330 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRKRCPSQSSSRP 1040 1050 1060 1070 1080 1090 340 350 360 mKIAA0 ATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK ::::::::::::::::::::::::::.::::: : gi|109 ATGISQPPTTPTGQATREDAKWTSQHTDTLTLGK 1100 1110 1120 >>gi|194219674|ref|XP_001917577.1| PREDICTED: La ribonuc (1037 aa) initn: 2467 init1: 2172 opt: 2440 Z-score: 2551.2 bits: 482.2 E(): 2.1e-133 Smith-Waterman score: 2440; 97.260% identity (97.808% similar) in 365 aa overlap (1-364:673-1037) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|194 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|194 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 770 780 790 800 810 820 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 830 840 850 860 870 880 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 890 900 910 920 930 940 280 290 300 310 320 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGG-SGEGRKRCPSQSSSR ::::::.:::::::::::::::::::::::::::::::::.::: ::::::::::::::: gi|194 AKNLDINPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVAAGGGSGEGRKRCPSQSSSR 950 960 970 980 990 1000 330 340 350 360 mKIAA0 PATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK ::: :::::: :::: ::::::::::::: :: : gi|194 PATMISQPPTPPTGQPIREDAKWTSQHSDTQTLGK 1010 1020 1030 >>gi|73953604|ref|XP_867287.1| PREDICTED: similar to la (749 aa) initn: 2477 init1: 2191 opt: 2437 Z-score: 2550.0 bits: 481.5 E(): 2.5e-133 Smith-Waterman score: 2437; 96.986% identity (98.082% similar) in 365 aa overlap (1-364:385-749) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|739 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|739 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 480 490 500 510 520 530 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 540 550 560 570 580 590 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 600 610 620 630 640 650 280 290 300 310 320 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSG-EGRKRCPSQSSSR ::::::::::::::::::::::::::::::::::::::::.:::.: ::::::::::::: gi|739 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVAAGGGGGEGRKRCPSQSSSR 660 670 680 690 700 710 330 340 350 360 mKIAA0 PATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :.: :::::: :::: .::::::::::::: :: : gi|739 PTTMISQPPTPPTGQPVREDAKWTSQHSDTQTLGK 720 730 740 >>gi|73953606|ref|XP_853394.1| PREDICTED: similar to la (895 aa) initn: 2477 init1: 2191 opt: 2437 Z-score: 2549.0 bits: 481.5 E(): 2.8e-133 Smith-Waterman score: 2437; 96.986% identity (98.082% similar) in 365 aa overlap (1-364:531-895) 10 20 30 mKIAA0 NQEVPPGPPRFQQVPTDALANKLFGAPEPS :::::::::::::::::::::::::::::: gi|739 IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPS 510 520 530 540 550 560 40 50 60 70 80 90 mKIAA0 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYPVVKEGRTLDAKMPRKRKTR :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|739 TIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTR 570 580 590 600 610 620 100 110 120 130 140 150 mKIAA0 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLK 630 640 650 660 670 680 160 170 180 190 200 210 mKIAA0 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALE 690 700 710 720 730 740 220 230 240 250 260 270 mKIAA0 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSK 750 760 770 780 790 800 280 290 300 310 320 mKIAA0 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSG-EGRKRCPSQSSSR ::::::::::::::::::::::::::::::::::::::::.:::.: ::::::::::::: gi|739 AKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVAAGGGGGEGRKRCPSQSSSR 810 820 830 840 850 860 330 340 350 360 mKIAA0 PATGISQPPTTPTGQATREDAKWTSQHSDTLTLRK :.: :::::: :::: .::::::::::::: :: : gi|739 PTTMISQPPTPPTGQPVREDAKWTSQHSDTQTLGK 870 880 890 364 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 03:50:58 2009 done: Mon Mar 16 03:57:05 2009 Total Scan time: 839.340 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]