# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01338.fasta.nr -Q ../query/mKIAA4132.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4132, 147 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920767 sequences Expectation_n fit: rho(ln(x))= 4.5101+/-0.00018; mu= 9.1875+/- 0.010 mean_var=56.5931+/-10.880, 0's: 43 Z-trim: 50 B-trim: 0 in 0/66 Lambda= 0.170488 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|34098390|sp|O88852.1|TSYL1_MOUSE RecName: Full= ( 379) 1031 261.3 9.4e-68 gi|51980314|gb|AAH81955.1| Testis-specific protein ( 379) 988 250.8 1.4e-64 gi|114609005|ref|XP_001161646.1| PREDICTED: TSPY-l ( 411) 983 249.6 3.6e-64 gi|109072942|ref|XP_001111796.1| PREDICTED: TSPY-l ( 433) 983 249.6 3.7e-64 gi|209572711|sp|Q9H0U9.3|TSYL1_HUMAN RecName: Full ( 437) 983 249.6 3.8e-64 gi|49065496|emb|CAG38566.1| TSPYL [Homo sapiens] ( 438) 983 249.6 3.8e-64 gi|75041111|sp|Q5R5G8.1|TSYL1_PONAB RecName: Full= ( 438) 983 249.6 3.8e-64 gi|55729171|emb|CAH91322.1| hypothetical protein [ ( 438) 983 249.6 3.8e-64 gi|12052784|emb|CAB66564.1| hypothetical protein [ ( 438) 983 249.6 3.8e-64 gi|114609003|ref|XP_527482.2| PREDICTED: hypotheti ( 438) 983 249.6 3.8e-64 gi|29124498|gb|AAH48969.1| TSPYL1 protein [Homo sa ( 438) 983 249.6 3.8e-64 gi|109072940|ref|XP_001111828.1| PREDICTED: TSPY-l ( 443) 983 249.6 3.8e-64 gi|149723123|ref|XP_001502713.1| PREDICTED: simila ( 429) 982 249.3 4.4e-64 gi|122144268|sp|Q0P5N2.1|TSYL1_BOVIN RecName: Full ( 432) 966 245.4 6.8e-63 gi|194035208|ref|XP_001925870.1| PREDICTED: simila ( 472) 964 244.9 1e-62 gi|73974039|ref|XP_539095.2| PREDICTED: similar to ( 240) 958 243.2 1.7e-62 gi|109102936|ref|XP_001114511.1| PREDICTED: simila ( 408) 847 216.1 4.2e-54 gi|46249812|gb|AAH68576.1| TSPY-like 6 [Homo sapie ( 410) 827 211.2 1.3e-52 gi|74715052|sp|Q8N831.1|TSYL6_HUMAN RecName: Full= ( 410) 827 211.2 1.3e-52 gi|114577374|ref|XP_001152621.1| PREDICTED: hypoth ( 406) 823 210.2 2.5e-52 gi|194035206|ref|XP_001928353.1| PREDICTED: simila ( 414) 685 176.3 4.2e-42 gi|194216367|ref|XP_001502707.2| PREDICTED: simila ( 412) 683 175.8 5.9e-42 gi|154425866|gb|AAI51252.1| TSPYL4 protein [Bos ta ( 414) 669 172.3 6.4e-41 gi|73974037|ref|XP_539094.2| PREDICTED: similar to ( 359) 668 172.0 6.8e-41 gi|211827837|gb|AAH09116.2| TSPYL4 protein [Homo s ( 235) 663 170.7 1.2e-40 gi|51859309|gb|AAH82023.1| TSPY-like 4 [Rattus nor ( 407) 664 171.1 1.5e-40 gi|13676448|dbj|BAB41148.1| hypothetical protein [ ( 414) 663 170.9 1.8e-40 gi|34098754|sp|Q9UJ04.2|TSYL4_HUMAN RecName: Full= ( 414) 663 170.9 1.8e-40 gi|114609139|ref|XP_518704.2| PREDICTED: TSPY-like ( 464) 663 170.9 1.9e-40 gi|5911845|emb|CAB55881.1| NAP (Nucleosome Assembl ( 464) 663 170.9 1.9e-40 gi|21410903|gb|AAH30922.1| Tspyl4 protein [Mus mus ( 211) 655 168.7 4.2e-40 gi|194224295|ref|XP_001498480.2| PREDICTED: simila ( 456) 656 169.2 6.3e-40 gi|26329925|dbj|BAC28701.1| unnamed protein produc ( 406) 655 168.9 6.9e-40 gi|34098611|sp|Q8VD63.1|TSYL4_MOUSE RecName: Full= ( 406) 655 168.9 6.9e-40 gi|26329665|dbj|BAC28571.1| unnamed protein produc ( 406) 651 167.9 1.4e-39 gi|114681754|ref|XP_001153747.1| PREDICTED: simila ( 467) 640 165.2 9.9e-39 gi|149030985|gb|EDL86012.1| similar to bA392M18.1 ( 334) 635 163.9 1.8e-38 gi|34849705|gb|AAH58340.1| TSPY-like 3 [Mus muscul ( 322) 634 163.6 2.1e-38 gi|74198570|dbj|BAE39764.1| unnamed protein produc ( 334) 634 163.6 2.1e-38 gi|74144183|dbj|BAE22169.1| unnamed protein produc ( 334) 634 163.6 2.1e-38 gi|148674071|gb|EDL06018.1| mCG49000 [Mus musculus ( 335) 634 163.7 2.1e-38 gi|109092412|ref|XP_001108535.1| PREDICTED: simila ( 353) 633 163.4 2.6e-38 gi|34098714|sp|Q9H489.1|TSYL3_HUMAN RecName: Full= ( 355) 630 162.7 4.4e-38 gi|12858539|dbj|BAB31351.1| unnamed protein produc ( 400) 514 134.2 1.9e-29 gi|81894633|sp|Q7TQI8.1|TSYL2_MOUSE RecName: Full= ( 677) 514 134.4 2.8e-29 gi|33391186|gb|AAQ17208.1| CASK interacting nucleo ( 677) 514 134.4 2.8e-29 gi|74007444|ref|XP_549013.2| PREDICTED: similar to ( 712) 513 134.1 3.5e-29 gi|114688704|ref|XP_001148762.1| PREDICTED: simila ( 248) 500 130.6 1.4e-28 gi|149031300|gb|EDL86298.1| TSPY-like 2 (predicted ( 405) 502 131.2 1.5e-28 gi|109510603|ref|XP_217607.4| PREDICTED: similar t ( 636) 503 131.6 1.7e-28 >>gi|34098390|sp|O88852.1|TSYL1_MOUSE RecName: Full=Test (379 aa) initn: 1031 init1: 1031 opt: 1031 Z-score: 1372.7 bits: 261.3 E(): 9.4e-68 Smith-Waterman score: 1031; 100.000% identity (100.000% similar) in 147 aa overlap (1-147:233-379) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::::::::::::::::::::::::::: gi|340 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGRDAEMLRYVTSLEVKELRHPKTGCK 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|340 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 270 280 290 300 310 320 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|340 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG 330 340 350 360 370 >>gi|51980314|gb|AAH81955.1| Testis-specific protein, Y- (379 aa) initn: 988 init1: 988 opt: 988 Z-score: 1315.5 bits: 250.8 E(): 1.4e-64 Smith-Waterman score: 988; 95.238% identity (98.639% similar) in 147 aa overlap (1-147:233-379) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::::::: gi|519 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPKTGCK 210 220 230 240 250 260 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::: :::::::::::.::::::::: gi|519 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRSGHEPQSFIRRNRDLICSFFTW 270 280 290 300 310 320 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG :::::.::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|519 FSDHSVPESDRIAEIIKEDLWPNPLQYYLSREGIRRPRRRPIREPVEIPRPFGFQSG 330 340 350 360 370 >>gi|114609005|ref|XP_001161646.1| PREDICTED: TSPY-like (411 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.4 bits: 249.6 E(): 3.6e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:265-411) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|114 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 240 250 260 270 280 290 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 300 310 320 330 340 350 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|114 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 360 370 380 390 400 410 >>gi|109072942|ref|XP_001111796.1| PREDICTED: TSPY-like (433 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.1 bits: 249.6 E(): 3.7e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:287-433) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|109 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 260 270 280 290 300 310 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 320 330 340 350 360 370 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|109 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 380 390 400 410 420 430 >>gi|209572711|sp|Q9H0U9.3|TSYL1_HUMAN RecName: Full=Tes (437 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:291-437) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|209 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|209 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 >>gi|49065496|emb|CAG38566.1| TSPYL [Homo sapiens] (438 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:292-438) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|490 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|490 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 >>gi|75041111|sp|Q5R5G8.1|TSYL1_PONAB RecName: Full=Test (438 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:292-438) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|750 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|750 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 >>gi|55729171|emb|CAH91322.1| hypothetical protein [Pong (438 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:292-438) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|557 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|557 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 >>gi|12052784|emb|CAB66564.1| hypothetical protein [Homo (438 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:292-438) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|120 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|120 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 >>gi|114609003|ref|XP_527482.2| PREDICTED: hypothetical (438 aa) initn: 983 init1: 983 opt: 983 Z-score: 1308.0 bits: 249.6 E(): 3.8e-64 Smith-Waterman score: 983; 93.878% identity (98.639% similar) in 147 aa overlap (1-147:292-438) 10 20 30 mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCK :::::.:::::::.:.:::::::::.:::: gi|114 RRHYLERRNYIIQNIPGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCK 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTW 330 340 350 360 370 380 100 110 120 130 140 mKIAA4 FSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG ::::::::::.:::::::::::::::::: :::.:: ::::.::::::::::::::: gi|114 FSDHSLPESDKIAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG 390 400 410 420 430 147 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 17:09:54 2009 done: Tue Mar 17 17:13:56 2009 Total Scan time: 582.860 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]