# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01337.fasta.nr -Q ../query/mKIAA1166.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1166, 243 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919237 sequences Expectation_n fit: rho(ln(x))= 5.6871+/-0.000192; mu= 6.7883+/- 0.011 mean_var=97.9623+/-18.694, 0's: 31 Z-trim: 38 B-trim: 342 in 2/64 Lambda= 0.129582 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|122889504|emb|CAM14599.1| novel protein [Mus mu ( 217) 1438 278.4 6.7e-73 gi|126342160|ref|XP_001378910.1| PREDICTED: hypoth ( 224) 1412 273.5 2e-71 gi|63102314|gb|AAH94942.1| CDNA sequence AK129302 ( 224) 1408 272.8 3.3e-71 gi|74206933|dbj|BAE33268.1| unnamed protein produc ( 224) 1405 272.2 4.9e-71 gi|10434587|dbj|BAB14308.1| unnamed protein produc ( 224) 1399 271.1 1.1e-70 gi|49118579|gb|AAH73590.1| MGC82889 protein [Xenop ( 224) 1387 268.8 5.1e-70 gi|213625683|gb|AAI71113.1| Hypothetical protein L ( 224) 1386 268.7 5.8e-70 gi|52354764|gb|AAH82892.1| LOC494779 protein [Xeno ( 224) 1385 268.5 6.6e-70 gi|31419167|gb|AAH53110.1| Zgc:63849 [Danio rerio] ( 224) 1346 261.2 1e-67 gi|118089258|ref|XP_420173.2| PREDICTED: hypotheti ( 242) 1330 258.2 8.7e-67 gi|47226235|emb|CAG08382.1| unnamed protein produc ( 224) 1312 254.8 8.5e-66 gi|209732682|gb|ACI67210.1| Hepatocellular carcino ( 224) 1303 253.1 2.7e-65 gi|193784804|dbj|BAG53957.1| unnamed protein produ ( 219) 1297 252.0 5.8e-65 gi|209735668|gb|ACI68703.1| Hepatocellular carcino ( 233) 1050 205.9 4.8e-51 gi|149441823|ref|XP_001517803.1| PREDICTED: hypoth ( 201) 990 194.6 1e-47 gi|156210430|gb|EDO31605.1| predicted protein [Nem ( 232) 808 160.6 2e-37 gi|149042276|gb|EDL95983.1| similar to cDNA sequen ( 133) 769 153.1 2.1e-35 gi|194374291|dbj|BAG57041.1| unnamed protein produ ( 176) 769 153.2 2.6e-35 gi|116283958|gb|AAH50850.1| AK129302 protein [Mus ( 196) 769 153.3 2.8e-35 gi|210111090|gb|EEA58903.1| hypothetical protein B ( 213) 728 145.6 6e-33 gi|215502243|gb|EEC11737.1| hepatocellular carcino ( 226) 617 124.9 1.1e-26 gi|198423134|ref|XP_002131537.1| PREDICTED: simila ( 227) 615 124.5 1.4e-26 gi|210111088|gb|EEA58901.1| hypothetical protein B ( 173) 476 98.4 7.8e-19 gi|149272035|ref|XP_001473240.1| PREDICTED: simila ( 96) 472 97.5 8.5e-19 gi|148682283|gb|EDL14230.1| mCG115432 [Mus musculu ( 78) 451 93.5 1.1e-17 gi|190585054|gb|EDV25123.1| hypothetical protein T ( 232) 431 90.1 3.3e-16 gi|189234221|ref|XP_972511.2| PREDICTED: similar t ( 266) 405 85.3 1.1e-14 gi|149450157|ref|XP_001520769.1| PREDICTED: simila ( 57) 346 73.7 7.1e-12 gi|212515588|gb|EEB17712.1| conserved hypothetical ( 263) 349 74.8 1.5e-11 gi|193624978|ref|XP_001946538.1| PREDICTED: simila ( 290) 334 72.1 1.1e-10 gi|194114659|gb|EDW36702.1| GL22734 [Drosophila pe ( 136) 329 70.9 1.2e-10 gi|193907904|gb|EDW06771.1| GI15222 [Drosophila mo ( 328) 333 71.9 1.4e-10 gi|194149862|gb|EDW65553.1| GJ19320 [Drosophila vi ( 328) 331 71.6 1.8e-10 gi|193893282|gb|EDV92148.1| GH24201 [Drosophila gr ( 346) 331 71.6 1.9e-10 gi|190622796|gb|EDV38320.1| GF21819 [Drosophila an ( 329) 330 71.4 2.1e-10 gi|194188966|gb|EDX02550.1| GE15631 [Drosophila ya ( 334) 330 71.4 2.1e-10 gi|7293304|gb|AAF48684.1| CG13001 [Drosophila mela ( 335) 330 71.4 2.1e-10 gi|190649164|gb|EDV46442.1| GG18214 [Drosophila er ( 337) 330 71.4 2.1e-10 gi|198149420|gb|EAL31383.2| GA11967 [Drosophila ps ( 326) 329 71.2 2.3e-10 gi|66517924|ref|XP_395763.2| PREDICTED: similar to ( 247) 327 70.7 2.5e-10 gi|194171607|gb|EDW86508.1| GK18524 [Drosophila wi ( 353) 329 71.2 2.5e-10 gi|156547885|ref|XP_001607797.1| PREDICTED: simila ( 246) 326 70.5 2.8e-10 gi|108882292|gb|EAT46517.1| conserved hypothetical ( 271) 319 69.3 7.4e-10 gi|108882293|gb|EAT46518.1| conserved hypothetical ( 272) 319 69.3 7.4e-10 gi|167862660|gb|EDS26043.1| conserved hypothetical ( 272) 318 69.1 8.5e-10 gi|157018501|gb|EAA07059.3| AGAP010728-PA [Anophel ( 251) 311 67.7 2e-09 gi|149439497|ref|XP_001520139.1| PREDICTED: hypoth ( 67) 295 64.2 5.9e-09 gi|194114658|gb|EDW36701.1| GL22723 [Drosophila pe ( 183) 279 61.6 9.9e-08 gi|187037158|emb|CAP23824.1| Hypothetical protein ( 260) 277 61.4 1.7e-07 gi|58081744|emb|CAA94170.4| C. elegans protein ZK9 ( 253) 267 59.5 6e-07 >>gi|122889504|emb|CAM14599.1| novel protein [Mus muscul (217 aa) initn: 1438 init1: 1438 opt: 1438 Z-score: 1465.1 bits: 278.4 E(): 6.7e-73 Smith-Waterman score: 1438; 100.000% identity (100.000% similar) in 217 aa overlap (27-243:1-217) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :::::::::::::::::::::::::::::::::: gi|122 MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 120 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVSENDLNKLLESTRRLHDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVSENDLNKLLESTRRLHDEY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 KPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 KPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAAA 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 AQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKPKRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 AQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKPKRK 160 170 180 190 200 210 mKIAA1 QDE ::: gi|122 QDE >>gi|126342160|ref|XP_001378910.1| PREDICTED: hypothetic (224 aa) initn: 977 init1: 977 opt: 1412 Z-score: 1438.7 bits: 273.5 E(): 2e-71 Smith-Waterman score: 1412; 96.429% identity (96.875% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :::::::::::::::::::::.:::::::::::: gi|126 MADEQEIMCKLESIKEIRNKTMQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|126 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|126 PKKPKRKQDE 220 >>gi|63102314|gb|AAH94942.1| CDNA sequence AK129302 [Mus (224 aa) initn: 977 init1: 977 opt: 1408 Z-score: 1434.6 bits: 272.8 E(): 3.3e-71 Smith-Waterman score: 1408; 96.429% identity (96.875% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :::::::::::::::::::::::::::::::::: gi|631 MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST :::::::::::::::.::::::::::::::::::::::::: :::::::::::: gi|631 FEALESEERHLKEYKREMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|631 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|631 PKKPKRKQDE 220 >>gi|74206933|dbj|BAE33268.1| unnamed protein product [M (224 aa) initn: 968 init1: 968 opt: 1405 Z-score: 1431.6 bits: 272.2 E(): 4.9e-71 Smith-Waterman score: 1405; 96.429% identity (96.429% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :::::::::::::::::::::::::::::::::: gi|742 MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|742 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRY 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|742 PKKPKRKQDE 220 >>gi|10434587|dbj|BAB14308.1| unnamed protein product [H (224 aa) initn: 972 init1: 972 opt: 1399 Z-score: 1425.5 bits: 271.1 E(): 1.1e-70 Smith-Waterman score: 1399; 95.982% identity (96.875% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :::::::::::::::::::::::::::::::::: gi|104 MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST :::::::::::::::::::::::::::::::::::.::::: :::::::::::: gi|104 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIRADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 RRLHDKYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|104 PKKPKRKQDE 220 >>gi|49118579|gb|AAH73590.1| MGC82889 protein [Xenopus l (224 aa) initn: 960 init1: 960 opt: 1387 Z-score: 1413.4 bits: 268.8 E(): 5.1e-70 Smith-Waterman score: 1387; 94.643% identity (96.875% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :.:::::::::::::::::::::::::::::::: gi|491 MGDEQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::.:::::::::::::::::::::::::::::::::::::: :::::::::::: gi|491 FETLESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES ::::.::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|491 RRLHEEYKPLKEHVDALRMTLGLQRLPNLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|491 LAAAAAAAQQLQVARKQDNRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|491 PKKPKRKQDE 220 >>gi|213625683|gb|AAI71113.1| Hypothetical protein LOC54 (224 aa) initn: 966 init1: 966 opt: 1386 Z-score: 1412.4 bits: 268.7 E(): 5.8e-70 Smith-Waterman score: 1386; 94.643% identity (96.429% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :.::::::::::::::::::: :::::::::::: gi|213 MGDEQEIMCKLESIKEIRNKTHQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::.:::::::::::::::::::::::::::::::::::::: :::::::::::: gi|213 FESLESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 RRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|213 LAAAAAAAQQLQVARKQDNRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|213 PKKPKRKQDE 220 >>gi|52354764|gb|AAH82892.1| LOC494779 protein [Xenopus (224 aa) initn: 962 init1: 962 opt: 1385 Z-score: 1411.4 bits: 268.5 E(): 6.6e-70 Smith-Waterman score: 1385; 94.196% identity (96.875% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE :.:.:::::::::::::::::::::::::::::: gi|523 MGDDQEIMCKLESIKEIRNKTLQMEKIKARLKAE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::.:::::::::::::::::::::::::::::::::::::: :::::::::::: gi|523 FETLESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES ::::.::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|523 RRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQDPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|523 LAAAAAAAQQLQVARKQDNRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE :::::::::: gi|523 PKKPKRKQDE 220 >>gi|31419167|gb|AAH53110.1| Zgc:63849 [Danio rerio] (224 aa) initn: 935 init1: 935 opt: 1346 Z-score: 1372.0 bits: 261.2 E(): 1e-67 Smith-Waterman score: 1346; 91.071% identity (95.982% similar) in 224 aa overlap (27-243:1-224) 10 20 30 40 50 60 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQEIMCKLESIKEIRNKTLQMEKIKARLKAE ::::::::::::.::::::::.::::::.::..: gi|314 MADEQEIMCKLENIKEIRNKTIQMEKIKSRLRTE 10 20 30 70 80 90 100 110 mKIAA1 FEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLEST ::::::::.::.::::::::::::::::::::::::::::: ::.::::::::: gi|314 FEALESEEKHLREYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSESDLNKLLEST 40 50 60 70 80 90 120 130 140 150 160 170 mKIAA1 RRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPES ::::::::::::::::::::::::::::: .::::::::::::::::::::::::::::: gi|314 RRLHDEYKPLKEHVDALRMTLGLQRLPDLSQEEEKLSLDYFEKQKAEWQTEPQEPPIPES 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA1 LAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN ::::::::::::.:::::.::::::::::::::::::::::::::::::::::::::::: gi|314 LAAAAAAAQQLQAARKQDARQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRN 160 170 180 190 200 210 240 mKIAA1 PKKPKRKQDE ::::::: :: gi|314 PKKPKRKPDE 220 >>gi|118089258|ref|XP_420173.2| PREDICTED: hypothetical (242 aa) initn: 971 init1: 971 opt: 1330 Z-score: 1355.4 bits: 258.2 E(): 8.7e-67 Smith-Waterman score: 1330; 91.892% identity (95.495% similar) in 222 aa overlap (30-243:21-242) 10 20 30 40 50 mKIAA1 LYLLYALAGAFFFLNNSLDVKLRVKSMADEQE-IMCKLESIKEIRNKTLQMEKIKARLKA ::: .:....: ..:::::::::::::::: gi|118 MACLNLTSGTEKVICHKHDQEQEHAVCSVQQIGQLRNKTLQMEKIKARLKA 10 20 30 40 50 60 70 80 90 100 110 mKIAA1 EFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINV-------SENDLNKLLES :::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|118 EFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLES 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 TRRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPE :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 TRRLHEEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPE 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 SLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 SLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSR 180 190 200 210 220 230 240 mKIAA1 NPKKPKRKQDE ::::::::::: gi|118 NPKKPKRKQDE 240 243 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 00:43:52 2009 done: Fri Mar 13 00:49:00 2009 Total Scan time: 724.260 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]