# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01106.fasta.nr -Q ../query/mKIAA1341.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1341, 506 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7909299 sequences Expectation_n fit: rho(ln(x))= 6.2296+/-0.000192; mu= 7.7081+/- 0.011 mean_var=103.9342+/-20.102, 0's: 33 Z-trim: 82 B-trim: 24 in 1/66 Lambda= 0.125804 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|220864583|emb|CAM20169.2| myelin basic protein ( 567) 3272 604.3 2.9e-170 gi|10434915|dbj|BAB14421.1| unnamed protein produc ( 576) 2946 545.1 1.9e-152 gi|119597744|gb|EAW77338.1| myelin expression fact ( 576) 2941 544.2 3.5e-152 gi|62900726|sp|Q8C854.1|MYEF2_MOUSE RecName: Full= ( 591) 2914 539.3 1.1e-150 gi|158533978|ref|NP_001013223.2| myelin expression ( 591) 2888 534.6 2.8e-149 gi|114656865|ref|XP_510381.2| PREDICTED: hypotheti ( 576) 2878 532.7 9.8e-149 gi|149250584|ref|XP_001474590.1| PREDICTED: simila ( 562) 2833 524.6 2.8e-146 gi|149250622|ref|XP_001476637.1| PREDICTED: simila ( 498) 2695 499.5 8.7e-139 gi|148673228|gb|EDL05175.1| mCG1028476 [Mus muscul ( 506) 2695 499.5 8.8e-139 gi|109081119|ref|XP_001106720.1| PREDICTED: simila ( 691) 2634 488.5 2.4e-135 gi|62900738|sp|Q9P2K5.2|MYEF2_HUMAN RecName: Full= ( 600) 2630 487.8 3.6e-135 gi|119597743|gb|EAW77337.1| myelin expression fact ( 600) 2625 486.8 6.7e-135 gi|194034775|ref|XP_001926198.1| PREDICTED: myelin ( 476) 2608 483.7 4.8e-134 gi|114656863|ref|XP_001165031.1| PREDICTED: myelin ( 597) 2537 470.9 4.3e-130 gi|194206683|ref|XP_001918232.1| PREDICTED: simila ( 681) 2533 470.2 7.9e-130 gi|74000608|ref|XP_544669.2| PREDICTED: similar to ( 615) 2522 468.2 2.9e-129 gi|19548762|gb|AAL90778.1| myelin gene expression ( 530) 2490 462.3 1.4e-127 gi|5410336|gb|AAD43038.1| myelin gene expression f ( 547) 2488 461.9 1.9e-127 gi|151554686|gb|AAI49930.1| MYEF2 protein [Bos tau ( 543) 2452 455.4 1.8e-125 gi|123233604|emb|CAM27707.1| myelin basic protein ( 550) 2450 455.1 2.3e-125 gi|123239641|emb|CAM20166.1| myelin basic protein ( 445) 2448 454.6 2.5e-125 gi|38511616|gb|AAH60946.1| Myef2 protein [Mus musc ( 454) 2390 444.1 3.7e-122 gi|53136664|emb|CAG32661.1| hypothetical protein [ ( 616) 2262 421.0 4.7e-115 gi|119597747|gb|EAW77341.1| myelin expression fact ( 416) 2138 398.3 2e-108 gi|148696179|gb|EDL28126.1| myelin basic protein e ( 456) 1999 373.1 8.6e-101 gi|149609987|ref|XP_001506341.1| PREDICTED: simila ( 481) 1935 361.5 2.8e-97 gi|80477220|gb|AAI08588.1| MGC131089 protein [Xeno ( 673) 1924 359.6 1.5e-96 gi|149023162|gb|EDL80056.1| rCG26626, isoform CRA_ ( 440) 1895 354.3 4e-95 gi|148696181|gb|EDL28128.1| myelin basic protein e ( 439) 1880 351.5 2.7e-94 gi|33338212|gb|AAQ13703.1|AF190159_1 MSTP156 [Homo ( 292) 1873 350.1 4.7e-94 gi|223649170|gb|ACN11343.1| Myelin expression fact ( 611) 1862 348.4 3.3e-93 gi|169146129|emb|CAQ15529.1| myelin expression fac ( 553) 1856 347.2 6.5e-93 gi|45758288|gb|AAS76477.1| myelin expression facto ( 553) 1856 347.2 6.5e-93 gi|81294244|gb|AAI08002.1| Myelin expression facto ( 557) 1852 346.5 1.1e-92 gi|536926|gb|AAA78270.1| myelin gene expression fa ( 435) 1848 345.7 1.5e-92 gi|119597745|gb|EAW77339.1| myelin expression fact ( 440) 1822 341.0 3.9e-91 gi|149023163|gb|EDL80057.1| rCG26626, isoform CRA_ ( 423) 1776 332.6 1.2e-88 gi|47230653|emb|CAF99846.1| unnamed protein produc ( 347) 1616 303.5 5.9e-80 gi|73986957|ref|XP_868347.1| PREDICTED: similar to ( 580) 1563 294.1 6.9e-77 gi|148696180|gb|EDL28127.1| myelin basic protein e ( 415) 1535 288.9 1.8e-75 gi|119894863|ref|XP_001253663.1| PREDICTED: hetero ( 730) 1513 285.1 4.5e-74 gi|187281|gb|AAA36192.1| M4 protein ( 729) 1511 284.7 5.7e-74 gi|114675122|ref|XP_001158275.1| PREDICTED: hetero ( 670) 1504 283.4 1.3e-73 gi|114675118|ref|XP_001158329.1| PREDICTED: hetero ( 692) 1504 283.4 1.3e-73 gi|55977747|sp|P52272.3|HNRPM_HUMAN RecName: Full= ( 730) 1504 283.4 1.4e-73 gi|73986955|ref|XP_854270.1| PREDICTED: similar to ( 730) 1503 283.3 1.6e-73 gi|149031663|gb|EDL86626.1| rCG37572, isoform CRA_ ( 731) 1503 283.3 1.6e-73 gi|158186698|ref|NP_001103381.1| heterogeneous nuc ( 729) 1501 282.9 2e-73 gi|126323785|ref|XP_001365966.1| PREDICTED: simila ( 727) 1494 281.6 4.8e-73 gi|114675126|ref|XP_001158984.1| PREDICTED: hetero ( 647) 1483 279.6 1.8e-72 >>gi|220864583|emb|CAM20169.2| myelin basic protein expr (567 aa) initn: 3272 init1: 3272 opt: 3272 Z-score: 3213.2 bits: 604.3 E(): 2.9e-170 Smith-Waterman score: 3272; 100.000% identity (100.000% similar) in 486 aa overlap (19-504:1-486) 10 20 30 40 50 60 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG :::::::::::::::::::::::::::::::::::::::::: gi|220 MADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG 10 20 30 40 70 80 90 100 110 120 mKIAA1 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA1 SMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 SMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL 410 420 430 440 450 460 490 500 mKIAA1 ERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::: gi|220 ERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIK 470 480 490 500 510 520 >>gi|10434915|dbj|BAB14421.1| unnamed protein product [H (576 aa) initn: 2994 init1: 2870 opt: 2946 Z-score: 2893.3 bits: 545.1 E(): 1.9e-152 Smith-Waterman score: 2970; 89.495% identity (95.758% similar) in 495 aa overlap (19-504:1-495) 10 20 30 40 50 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEA--AAGDDGSQQQPAEP----RRDTHPGEPEKP- ::::.:.:. :.: :. . ::::: ::. ::.: :: gi|104 MADANKAEVPGATGGDSPHLQPAEPPGEPRREPHPAEAEKQQ 10 20 30 40 60 70 80 90 100 110 mKIAA1 PR--SSANGVKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRV :. ::.::::::::::.:::::::::::::.:::::::::::::::::::::::::::: gi|104 PQHSSSSNGVKMENDESAKEEKSDLKEKSTGSKKANRFHPYSKDKNSGTGEKKGPNRNRV 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA1 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 KYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEV ::::::::::::::::::::::: :::: :: :.:. :.::::.:::::::::::::::: gi|104 KYDLSGRPLNIKEDPDGENARRASQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGG :::::::::::::::::::::::::::::::::.:::::.:: ::::::::::::::::: gi|104 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEEYRSHDGKTPQLPRGLGGIGMGLGPGG 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 QPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMG :::::::::: ::::::::.:::::::::::.::::::.:::::::::::.::::::::: gi|104 QPISASQLNIGGVMGNLGPGGMGMDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 ELYRGAMTSSMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDR :::::::::::::::::::::..::::::::::::.:.::..:::::::::::::::::: gi|104 ELYRGAMTSSMERDFGRGDIGINRGFGDSFGRLGGGMGGMNSVTGGMGMGLDRMSSSFDR 410 420 430 440 450 460 480 490 500 mKIAA1 MGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN ::::::::::::::.::::::::::::::.:.: gi|104 MGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQC 470 480 490 500 510 520 gi|104 GHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA 530 540 550 560 570 >>gi|119597744|gb|EAW77338.1| myelin expression factor 2 (576 aa) initn: 2989 init1: 2865 opt: 2941 Z-score: 2888.4 bits: 544.2 E(): 3.5e-152 Smith-Waterman score: 2965; 89.293% identity (95.960% similar) in 495 aa overlap (19-504:1-495) 10 20 30 40 50 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEA--AAGDDGSQQQPAEP----RRDTHPGEPEKP- ::::.:.:. :.: :. . ::::: ::. ::.: :: gi|119 MADANKAEVPGATGGDSPHLQPAEPPGEPRREPHPAEAEKQQ 10 20 30 40 60 70 80 90 100 110 mKIAA1 PR--SSANGVKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRV :. ::.::::::::::.:::::::::::::.::::::::::::::::.::::::::::: gi|119 PQHSSSSNGVKMENDESAKEEKSDLKEKSTGSKKANRFHPYSKDKNSGAGEKKGPNRNRV 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA1 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 KYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEV :::::::::::::::::::::::::::: :: :.:. :.::::.:::::::::::::::: gi|119 KYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGG :::::::::::::::::::::::::::::::::.:::::.:: ::::::::::::::::: gi|119 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEEYRSHDGKTPQLPRGLGGIGMGLGPGG 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 QPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMG :::::::::: ::::::::.:::::::::::.::::::.:::::::::::.::::::::: gi|119 QPISASQLNIGGVMGNLGPGGMGMDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 ELYRGAMTSSMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDR :::::::::::::::::::::..::::::::::::.:..:..:::::::::::::::::: gi|119 ELYRGAMTSSMERDFGRGDIGINRGFGDSFGRLGGGMGSMNSVTGGMGMGLDRMSSSFDR 410 420 430 440 450 460 480 490 500 mKIAA1 MGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN ::::::::::::::.::::::::::::::.:.: gi|119 MGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQC 470 480 490 500 510 520 gi|119 GHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA 530 540 550 560 570 >>gi|62900726|sp|Q8C854.1|MYEF2_MOUSE RecName: Full=Myel (591 aa) initn: 2888 init1: 2888 opt: 2914 Z-score: 2861.8 bits: 539.3 E(): 1.1e-150 Smith-Waterman score: 3214; 95.294% identity (95.294% similar) in 510 aa overlap (19-504:1-510) 10 20 30 40 50 60 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG :::::::::::::::::::::::::::::::::::::::::: gi|629 MADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG 10 20 30 40 70 80 90 100 110 120 mKIAA1 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS 350 360 370 380 390 400 430 440 450 mKIAA1 SMERDFGRGDIGLSRGFGDSFGRLG------------------------GSMSGMSTVTG ::::::::::::::::::::::::: ::::::::::: gi|629 SMERDFGRGDIGLSRGFGDSFGRLGSAMIGGFAGRIGASNMGPVGTGISGSMSGMSTVTG 410 420 430 440 450 460 460 470 480 490 500 mKIAA1 GMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::::::::::::::::::::::::::: gi|629 GMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLP 470 480 490 500 510 520 gi|629 FDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFESAESAEKACRIMNGIKISGRE 530 540 550 560 570 580 >>gi|158533978|ref|NP_001013223.2| myelin expression fac (591 aa) initn: 2862 init1: 2862 opt: 2888 Z-score: 2836.3 bits: 534.6 E(): 2.8e-149 Smith-Waterman score: 3188; 94.314% identity (94.706% similar) in 510 aa overlap (19-504:1-510) 10 20 30 40 50 60 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG :::::: :::::::: :::::::::: ::::::::::::::: gi|158 MADADKPEAAAGDDGPQQQPAEPRRDPHPGEPEKPPRSSANG 10 20 30 40 70 80 90 100 110 120 mKIAA1 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL :::::::::::::::::::::::::::::::::::::::::.::::::::::.::::::: gi|158 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSIVNNPNIPPEVINNLQAGRL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS 350 360 370 380 390 400 430 440 450 mKIAA1 SMERDFGRGDIGLSRGFGDSFGRLG------------------------GSMSGMSTVTG ::::::::::::::::::::::::: ::::::::::: gi|158 SMERDFGRGDIGLSRGFGDSFGRLGSAMIGGFAGRIGASNMGPVGTGISGSMSGMSTVTG 410 420 430 440 450 460 460 470 480 490 500 mKIAA1 GMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLP 470 480 490 500 510 520 gi|158 FDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFESPESAEKACRIMNGIKISGRE 530 540 550 560 570 580 >>gi|114656865|ref|XP_510381.2| PREDICTED: hypothetical (576 aa) initn: 2926 init1: 2804 opt: 2878 Z-score: 2826.6 bits: 532.7 E(): 9.8e-149 Smith-Waterman score: 2902; 87.879% identity (93.939% similar) in 495 aa overlap (19-504:1-495) 10 20 30 40 50 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEA--AAGDDGSQQQPAEP----RRDTHPGEPEKP- ::::.:.:. :.: :. . ::::: ::. :: : :: gi|114 MADANKAEVPGATGGDSPHLQPAEPPGEPRREPHPPEAEKQQ 10 20 30 40 60 70 80 90 100 110 mKIAA1 PR--SSANGVKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRV :. ::.:::::::::: :::::::::::::.:::::::::::::::::::::::::::: gi|114 PQHSSSSNGVKMENDESSKEEKSDLKEKSTGSKKANRFHPYSKDKNSGTGEKKGPNRNRV 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA1 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMN 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA1 KYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEV :::::::::::::::::::::::::::: :: :.:. :.::::.:::::::::::::::: gi|114 KYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA1 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA1 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGG :::::::::::::::::::::::::::::::::. . .:: ::::::::::::: gi|114 AIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEEXXXXXXELPHLPCGLGGIGMGLGPGG 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA1 QPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMG :::::::::: ::::::::.:::::::::::.::::::.:::::::::::.::::::::: gi|114 QPISASQLNIGGVMGNLGPGGMGMDGPGFGGMNRIGGGIGFGGLEAMNSMGGFGGVGRMG 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA1 ELYRGAMTSSMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDR :::::::::::::::::::::..::::::::::::.:.::..:::::::::::::::::: gi|114 ELYRGAMTSSMERDFGRGDIGINRGFGDSFGRLGGGMGGMNSVTGGMGMGLDRMSSSFDR 410 420 430 440 450 460 480 490 500 mKIAA1 MGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN ::::::::::::::.::::::::::::::.:.: gi|114 MGPGIGAILERSIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQC 470 480 490 500 510 520 gi|114 GHVMFAEIKMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRLDRNA 530 540 550 560 570 >>gi|149250584|ref|XP_001474590.1| PREDICTED: similar to (562 aa) initn: 2782 init1: 2782 opt: 2833 Z-score: 2782.6 bits: 524.6 E(): 2.8e-146 Smith-Waterman score: 3111; 93.452% identity (93.452% similar) in 504 aa overlap (1-504:47-517) 10 20 30 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAG :::::::::::::::::::::::::::::: gi|149 VQCIMQQGQRQSLVGLGVADMKDRQGASGRRHCSARSPHRGRGGARGGMADADKSEAAAG 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA1 DDGSQQQPAEPRRDTHPGEPEKPPRSSANGVKMENDESVKEEKSDLKEKSTGNKKANRFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DDGSQQQPAEPRRDTHPGEPEKPPRSSANGVKMENDESVKEEKSDLKEKSTGNKKANRFH 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA1 PYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSR 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA1 GCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDV 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA1 GSGLVNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GSGLVNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKR 260 270 280 290 300 310 280 290 300 310 320 330 mKIAA1 ADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHD 320 330 340 350 360 370 340 350 360 370 380 390 mKIAA1 SKTSQLPRGLGGIGMGLGPGGQPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SKTSQLPRGLGGIGMGLGPGGQPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGV 380 390 400 410 420 430 400 410 420 430 440 450 mKIAA1 GFGGLEAMNSMAGFGGVGRMGELYRGAMTSSMERDFGRGDIGLSRGFGDSFGRLGGSMSG ::::::::::::::::::::: :::::: gi|149 GFGGLEAMNSMAGFGGVGRMG---------------------------------GGSMSG 440 450 460 460 470 480 490 500 mKIAA1 MSTVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MSTVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGSKGNQI 470 480 490 500 510 520 gi|149 FVRNLPFDLTWQKLKEKFSQCGQINRDNKTHSNCGQHHS 530 540 550 560 >>gi|149250622|ref|XP_001476637.1| PREDICTED: similar to (498 aa) initn: 2644 init1: 2644 opt: 2695 Z-score: 2648.0 bits: 499.5 E(): 8.7e-139 Smith-Waterman score: 2973; 93.210% identity (93.210% similar) in 486 aa overlap (19-504:1-453) 10 20 30 40 50 60 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG :::::::::::::::::::::::::::::::::::::::::: gi|149 MADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG 10 20 30 40 70 80 90 100 110 120 mKIAA1 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMG--------- 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 SMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL :::::::::::::::::::::::::::::::::::: gi|149 ------------------------GGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL 400 410 420 490 500 mKIAA1 ERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::: gi|149 ERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLPFDLTWQKLKEKFSQCGQINRDSKT 430 440 450 460 470 480 >>gi|148673228|gb|EDL05175.1| mCG1028476 [Mus musculus] (506 aa) initn: 2644 init1: 2644 opt: 2695 Z-score: 2647.9 bits: 499.5 E(): 8.8e-139 Smith-Waterman score: 2973; 93.210% identity (93.210% similar) in 486 aa overlap (19-504:1-453) 10 20 30 40 50 60 mKIAA1 RHCSARSPHRGRGGARGGMADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG :::::::::::::::::::::::::::::::::::::::::: gi|148 MADADKSEAAAGDDGSQQQPAEPRRDTHPGEPEKPPRSSANG 10 20 30 40 70 80 90 100 110 120 mKIAA1 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA1 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA1 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA1 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA1 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQPISASQLN 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA1 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ITGVMGNLGPSGMGMDGPGFGGVNRIGGGVGFGGLEAMNSMAGFGGVGRMG--------- 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 SMERDFGRGDIGLSRGFGDSFGRLGGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL :::::::::::::::::::::::::::::::::::: gi|148 ------------------------GGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAIL 400 410 420 490 500 mKIAA1 ERSIDVDRGFLSGPMGSGMRDRLGRN :::::::::::::::::::::::: gi|148 ERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLPFDLTWQKLKEKFSQCGQVSNSSRG 430 440 450 460 470 480 >>gi|109081119|ref|XP_001106720.1| PREDICTED: similar to (691 aa) initn: 2946 init1: 2521 opt: 2634 Z-score: 2586.2 bits: 488.5 E(): 2.4e-135 Smith-Waterman score: 2957; 85.417% identity (91.098% similar) in 528 aa overlap (11-504:83-610) 10 20 30 mKIAA1 RHCSARSPHRGRGGARGG-MADADKSEA--AAGDDGSQQQ ::::. :: ::::.:.:. :.: :: . : gi|109 VTTLGAFSNRDPLPLPRQPPLSRSEPLSSGGRGGGSGGGMADANKAEVPGATGGDGPHLQ 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA1 PAEP----RRDTHPGEPEKP-PR--SSANGVKMENDESVKEEKSDLKEKSTGNKKANRFH :::: ::. :: : :: :. ::.::::::::::.:::::::::::::.::::::: gi|109 PAEPPGEQRREPHPPEAEKQQPQHSSSSNGVKMENDESAKEEKSDLKEKSTGSKKANRFH 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA1 PYSKDKNSGTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSR ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PYSKDKNSSTGEKKGPNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSR 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA1 GCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDV ::::::::::::::::::::::::::::::::::::::::::::::::: :: :.:. :. gi|109 GCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDM 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA1 GSGLVNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKR ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GSGLMNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKR 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA1 ADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHD ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 ADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHEEYRSHD 360 370 380 390 400 410 340 350 360 370 380 390 mKIAA1 SKTSQLPRGLGGIGMGLGPGGQPISASQLNITGVMGNLGPSGMGMDGPGFGGVNRIGGGV ::: ::::::::::::::::::::::::::: ::::::::.:::::::::::.::::::. gi|109 SKTPQLPRGLGGIGMGLGPGGQPISASQLNIGGVMGNLGPGGMGMDGPGFGGMNRIGGGI 420 430 440 450 460 470 400 410 420 430 440 mKIAA1 GFGGLEAMNSMAGFGGVGRMGELYRGAMTSSMERDFGRGDIGLSRGFGDSFGRLG----- :::::::::::.::::::::::::::::::::::::::::::..::::::::::: gi|109 GFGGLEAMNSMGGFGGVGRMGELYRGAMTSSMERDFGRGDIGINRGFGDSFGRLGSAMIG 480 490 500 510 520 530 450 460 470 480 mKIAA1 -------------------GSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDV :.:.::..::::::::::::::::::::::::::::::::. gi|109 GFAGRIGASNMGPVGSGISGGMGGMNSVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDM 540 550 560 570 580 590 490 500 mKIAA1 DRGFLSGPMGSGMRDRLGRN ::::::::::::::.:.: gi|109 DRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKS 600 610 620 630 640 650 506 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 20:07:55 2009 done: Fri Mar 13 20:14:55 2009 Total Scan time: 943.810 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]