# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01066.fasta.nr -Q ../query/mFLJ00110.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00110, 244 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918976 sequences Expectation_n fit: rho(ln(x))= 5.0785+/-0.000186; mu= 9.8900+/- 0.010 mean_var=80.0164+/-15.255, 0's: 39 Z-trim: 51 B-trim: 0 in 0/66 Lambda= 0.143379 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847420|dbj|BAD21382.1| mFLJ00110 protein [Mus ( 244) 1599 339.6 2.7e-91 gi|149047434|gb|EDM00104.1| Max dimerization prote ( 261) 1569 333.5 2.1e-89 gi|149047433|gb|EDM00103.1| Max dimerization prote ( 303) 1382 294.8 1e-77 gi|15030104|gb|AAH11303.1| Max dimerization protei ( 209) 1364 291.0 1e-76 gi|12841625|dbj|BAB25287.1| unnamed protein produc ( 209) 1356 289.3 3.3e-76 gi|3914028|sp|Q60948.1|MAD4_MOUSE RecName: Full=Ma ( 209) 1346 287.2 1.4e-75 gi|119602940|gb|EAW82534.1| MAX dimerization prote ( 265) 1336 285.3 6.9e-75 gi|108994870|ref|XP_001118504.1| PREDICTED: simila ( 455) 1305 279.1 8.7e-73 gi|73951384|ref|XP_545921.2| PREDICTED: similar to ( 209) 1280 273.6 1.8e-71 gi|111307552|gb|AAI20231.1| MAX dimerization prote ( 209) 1268 271.1 9.9e-71 gi|6016524|sp|Q14582.2|MAD4_HUMAN RecName: Full=Ma ( 209) 1226 262.4 4.1e-68 gi|54696796|gb|AAV38770.1| MAX dimerization protei ( 210) 1226 262.4 4.1e-68 gi|126331987|ref|XP_001365277.1| PREDICTED: hypoth ( 205) 1099 236.1 3.3e-60 gi|53130290|emb|CAG31474.1| hypothetical protein [ ( 205) 1091 234.5 1e-59 gi|224050205|ref|XP_002198022.1| PREDICTED: MAD4 [ ( 205) 1076 231.4 8.8e-59 gi|197129047|gb|ACH45545.1| putative basic helix-l ( 205) 1073 230.8 1.4e-58 gi|114592898|ref|XP_517071.2| PREDICTED: MAD4 isof ( 209) 1061 228.3 7.7e-58 gi|134025403|gb|AAI35371.1| LOC100124794 protein [ ( 204) 1025 220.8 1.3e-55 gi|4838471|gb|AAD31009.1|AF127039_1 basic helix-lo ( 204) 1007 217.1 1.7e-54 gi|57033059|gb|AAH88828.1| Xmad4 protein [Xenopus ( 203) 974 210.3 2e-52 gi|74137371|dbj|BAE22039.1| unnamed protein produc ( 199) 955 206.3 3e-51 gi|148705500|gb|EDL37447.1| Max dimerization prote ( 172) 947 204.6 8.4e-51 gi|194209370|ref|XP_001488590.2| PREDICTED: simila ( 156) 940 203.1 2.1e-50 gi|119602938|gb|EAW82532.1| MAX dimerization prote ( 174) 829 180.2 1.9e-43 gi|10440522|dbj|BAB15791.1| FLJ00110 protein [Homo ( 224) 829 180.3 2.3e-43 gi|807890|emb|CAA89217.1| HW2.1 (novel protein sim ( 128) 762 166.2 2.2e-39 gi|62533223|gb|AAH93586.1| Unknown (protein for IM ( 151) 753 164.4 9.2e-39 gi|189514725|ref|XP_687970.3| PREDICTED: similar t ( 163) 737 161.2 9.6e-38 gi|4838473|gb|AAD31010.1|AF127040_1 basic helix-lo ( 236) 733 160.5 2.2e-37 gi|149047432|gb|EDM00102.1| Max dimerization prote ( 141) 717 157.0 1.5e-36 gi|123209233|emb|CAM15332.1| novel protein similar ( 221) 660 145.4 7.5e-33 gi|126304041|ref|XP_001381764.1| PREDICTED: simila ( 224) 648 142.9 4.2e-32 gi|194220648|ref|XP_001493078.2| PREDICTED: simila ( 221) 642 141.6 9.9e-32 gi|119903751|ref|XP_592508.3| PREDICTED: similar t ( 222) 641 141.4 1.1e-31 gi|219518934|gb|AAI43833.1| MXD1 protein [Homo sap ( 220) 638 140.8 1.7e-31 gi|116248535|sp|Q0VFI9.1|MAD1_XENTR RecName: Full= ( 221) 638 140.8 1.8e-31 gi|60819719|gb|AAX36510.1| MAX dimerization protei ( 221) 636 140.4 2.3e-31 gi|729978|sp|Q05195.1|MAD1_HUMAN RecName: Full=MAD ( 221) 636 140.4 2.3e-31 gi|109103270|ref|XP_001098088.1| PREDICTED: simila ( 221) 636 140.4 2.3e-31 gi|60831045|gb|AAX36955.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31 gi|60654191|gb|AAX29788.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31 gi|60827215|gb|AAX36790.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31 gi|116248534|sp|Q0VH34.1|MAD1_XENLA RecName: Full= ( 221) 633 139.8 3.6e-31 gi|47219970|emb|CAG11503.1| unnamed protein produc ( 282) 620 137.2 2.8e-30 gi|149040384|gb|EDL94422.1| Max interacting protei ( 218) 594 131.7 9.5e-29 gi|73970257|ref|XP_855458.1| PREDICTED: similar to ( 377) 586 130.3 4.5e-28 gi|82207870|sp|Q7SX95.1|MAD3_DANRE RecName: Full=M ( 200) 582 129.2 5e-28 gi|55959454|emb|CAI15477.1| MAX interactor 1 [Homo ( 218) 577 128.2 1.1e-27 gi|602054|emb|CAA58168.1| MAD [Mus musculus] g ( 226) 571 127.0 2.6e-27 gi|2506888|sp|P50538.2|MAD1_MOUSE RecName: Full=MA ( 227) 561 124.9 1.1e-26 >>gi|47847420|dbj|BAD21382.1| mFLJ00110 protein [Mus mus (244 aa) initn: 1599 init1: 1599 opt: 1599 Z-score: 1795.3 bits: 339.6 E(): 2.7e-91 Smith-Waterman score: 1599; 100.000% identity (100.000% similar) in 244 aa overlap (1-244:1-244) 10 20 30 40 50 60 mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEH 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 GYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 GYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 STRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 STRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDS 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 TGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 TGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGC 190 200 210 220 230 240 mFLJ00 PGLS :::: gi|478 PGLS >>gi|149047434|gb|EDM00104.1| Max dimerization protein 4 (261 aa) initn: 1445 init1: 1445 opt: 1569 Z-score: 1761.4 bits: 333.5 E(): 2.1e-89 Smith-Waterman score: 1569; 98.770% identity (99.590% similar) in 244 aa overlap (1-244:19-261) 10 20 30 40 mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLL ::.:::::::::::::::::::::::: :::::::::::::: gi|149 MCQFEGLRRRVAAQRWSPRVALVCRQARGVRRAEPAGARRAAAAA-VPCAGGRMELNSLL 10 20 30 40 50 50 60 70 80 90 100 mFLJ00 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA 60 70 80 90 100 110 110 120 130 140 150 160 mFLJ00 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK 120 130 140 150 160 170 170 180 190 200 210 220 mFLJ00 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDHYSLQ 180 190 200 210 220 230 230 240 mFLJ00 SSGCSDSSYGHPCRRPGCPGLS :::::::::::::::::::::: gi|149 SSGCSDSSYGHPCRRPGCPGLS 240 250 260 >>gi|149047433|gb|EDM00103.1| Max dimerization protein 4 (303 aa) initn: 1433 init1: 1249 opt: 1382 Z-score: 1551.5 bits: 294.8 E(): 1e-77 Smith-Waterman score: 1382; 96.018% identity (98.230% similar) in 226 aa overlap (1-226:19-243) 10 20 30 40 mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLL ::.:::::::::::::::::::::::: :::::::::::::: gi|149 MCQFEGLRRRVAAQRWSPRVALVCRQARGVRRAEPAGARRAAAAA-VPCAGGRMELNSLL 10 20 30 40 50 50 60 70 80 90 100 mFLJ00 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA 60 70 80 90 100 110 110 120 130 140 150 160 mFLJ00 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK 120 130 140 150 160 170 170 180 190 200 210 220 mFLJ00 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::. . gi|149 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDHYTSS 180 190 200 210 220 230 230 240 mFLJ00 SSGCSDSSYGHPCRRPGCPGLS . : gi|149 WAYCCAILQATAAAWSACLCLPTLRSGLKLPVPSPQGKTPCREAGSGSHILEPRVATHNL 240 250 260 270 280 290 >>gi|15030104|gb|AAH11303.1| Max dimerization protein 4 (209 aa) initn: 1364 init1: 1364 opt: 1364 Z-score: 1533.5 bits: 291.0 E(): 1e-76 Smith-Waterman score: 1364; 100.000% identity (100.000% similar) in 209 aa overlap (36-244:1-209) 10 20 30 40 50 60 mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV :::::::::::::::::::::::::::::: gi|150 MELNSLLLLLEAAEYLERRDREAEHGYASV 10 20 30 70 80 90 100 110 120 mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS 160 170 180 190 200 >>gi|12841625|dbj|BAB25287.1| unnamed protein product [M (209 aa) initn: 1356 init1: 1356 opt: 1356 Z-score: 1524.5 bits: 289.3 E(): 3.3e-76 Smith-Waterman score: 1356; 99.043% identity (100.000% similar) in 209 aa overlap (36-244:1-209) 10 20 30 40 50 60 mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV :::::::::::::::.:::::::::::::: gi|128 MELNSLLLLLEAAEYMERRDREAEHGYASV 10 20 30 70 80 90 100 110 120 mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|128 TLSLLKRAKMHIKKLEEQDRRALSIKEQLRREHRFLKRRLEQLSVQSVERVRTDSTGSAV 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS 160 170 180 190 200 >>gi|3914028|sp|Q60948.1|MAD4_MOUSE RecName: Full=Max-in (209 aa) initn: 1346 init1: 1346 opt: 1346 Z-score: 1513.3 bits: 287.2 E(): 1.4e-75 Smith-Waterman score: 1346; 98.565% identity (99.522% similar) in 209 aa overlap (36-244:1-209) 10 20 30 40 50 60 mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV :::::::::::::::::::::::::::::. gi|391 MELNSLLLLLEAAEYLERRDREAEHGYASM 10 20 30 70 80 90 100 110 120 mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT ::::::::::::::::::::.:::::::::::::::::::::::::::: :::::::::: gi|391 LPFDGDFARKKTKTAGLVRKGPNNRSSHNELEKHRRAKLRLYLEQLKQLGPLGPDSTRHT 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|391 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|391 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS 160 170 180 190 200 >>gi|119602940|gb|EAW82534.1| MAX dimerization protein 4 (265 aa) initn: 1268 init1: 1268 opt: 1336 Z-score: 1500.8 bits: 285.3 E(): 6.9e-75 Smith-Waterman score: 1336; 89.958% identity (94.561% similar) in 239 aa overlap (9-244:28-265) 10 20 30 mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPC---AGGRMEL ::: :::::::: :::::: :: ::::::: gi|119 MCQFEGLRRRVAAERRSPRSLEVRRPGARGGRRAEPAGAGRAAAAA-VPGRTGAGGRMEL 10 20 30 40 50 40 50 60 70 80 90 mFLJ00 NSLLLLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEK ::::.:::::::::::::::::::::::::::::::.:::.::::::::::::::::::: gi|119 NSLLILLEAAEYLERRDREAEHGYASVLPFDGDFAREKTKAAGLVRKAPNNRSSHNELEK 60 70 80 90 100 110 100 110 120 130 140 150 mFLJ00 HRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREH ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::.:: gi|119 HRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEH 120 130 140 150 160 170 160 170 180 190 200 210 mFLJ00 RFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDH ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|119 RFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDH 180 190 200 210 220 230 220 230 240 mFLJ00 YSLQSSGCSDSSYGHPCRRPGCPGLS :::::. .::..: ::: : :.:: gi|119 YSLQSGTGGDSGFGPHCRRLGRPALS 240 250 260 >>gi|108994870|ref|XP_001118504.1| PREDICTED: similar to (455 aa) initn: 996 init1: 996 opt: 1305 Z-score: 1463.1 bits: 279.1 E(): 8.7e-73 Smith-Waterman score: 1305; 87.295% identity (93.033% similar) in 244 aa overlap (9-244:213-455) 10 20 30 mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPC---AGGR ::: :::::::: :::::: :: :::: gi|108 LSLMCQFEGLRRRVAAERRSPRSLEVRRPGARGGRRAEPAGAGRAAAAA-VPGGTGAGGR 190 200 210 220 230 240 40 50 60 70 80 90 mFLJ00 MELNSLLLLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNE :::::::.:::::::::::::::::::::::::::::.:.:::.:.:::::::::::::: gi|108 MELNSLLILLEAAEYLERRDREAEHGYASVLPFDGDFTREKTKAASLVRKAPNNRSSHNE 250 260 270 280 290 300 100 110 120 130 140 150 mFLJ00 LEKHRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|108 LEKHRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQ 310 320 330 340 350 360 160 170 180 190 200 210 mFLJ00 REHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQE-----VDIEGMEFGPGELDSAG .::::::::::::::::::::::::::::::::::::: :::::::::::::::.: gi|108 QEHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEKGEMEVDIEGMEFGPGELDSVG 370 380 390 400 410 420 220 230 240 mFLJ00 SSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS :::::::::::::.. .::..: ::: : :.:: gi|108 SSSDADDHYSLQSGSGGDSGFGPHCRRLGRPALS 430 440 450 >>gi|73951384|ref|XP_545921.2| PREDICTED: similar to Max (209 aa) initn: 1280 init1: 1280 opt: 1280 Z-score: 1439.6 bits: 273.6 E(): 1.8e-71 Smith-Waterman score: 1280; 93.301% identity (98.565% similar) in 209 aa overlap (36-244:1-209) 10 20 30 40 50 60 mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV :. ::::.:::::::::::::::::::::: gi|739 MKRNSLLILLEAAEYLERRDREAEHGYASV 10 20 30 70 80 90 100 110 120 mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|739 LPFDGDFARKKTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV ::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::::: gi|739 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSMQSLERVRTDSTGSAV 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS ::::::::::.::::::::::::.:::::.::::::::.::::..:: :::::: :::: gi|739 STDDSEQEVDVEGMEFGPGELDSVGSSSDVDDHYSLQSGGCSDGGYGPPCRRPGRPGLS 160 170 180 190 200 >>gi|111307552|gb|AAI20231.1| MAX dimerization protein 4 (209 aa) initn: 1268 init1: 1268 opt: 1268 Z-score: 1426.1 bits: 271.1 E(): 9.9e-71 Smith-Waterman score: 1268; 92.344% identity (98.565% similar) in 209 aa overlap (36-244:1-209) 10 20 30 40 50 60 mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV :::::::.:::::::::::::::::::::: gi|111 MELNSLLILLEAAEYLERRDREAEHGYASV 10 20 30 70 80 90 100 110 120 mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|111 LPFDGDFARKKTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV ::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::::: gi|111 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSAQSLERVRTDSTGSAV 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS ::::::::::.::::::::::::.::.::.::::::...::: .:.: :::::: :::: gi|111 STDDSEQEVDVEGMEFGPGELDSVGSGSDVDDHYSLRGGGCSHGSFGPPCRRPGRPGLS 160 170 180 190 200 244 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 17:25:09 2009 done: Thu Mar 12 17:30:20 2009 Total Scan time: 729.230 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]