# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01066.fasta.nr -Q ../query/mFLJ00110.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mFLJ00110, 244 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7918976 sequences
Expectation_n fit: rho(ln(x))= 5.0785+/-0.000186; mu= 9.8900+/- 0.010
mean_var=80.0164+/-15.255, 0's: 39 Z-trim: 51 B-trim: 0 in 0/66
Lambda= 0.143379
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|47847420|dbj|BAD21382.1| mFLJ00110 protein [Mus ( 244) 1599 339.6 2.7e-91
gi|149047434|gb|EDM00104.1| Max dimerization prote ( 261) 1569 333.5 2.1e-89
gi|149047433|gb|EDM00103.1| Max dimerization prote ( 303) 1382 294.8 1e-77
gi|15030104|gb|AAH11303.1| Max dimerization protei ( 209) 1364 291.0 1e-76
gi|12841625|dbj|BAB25287.1| unnamed protein produc ( 209) 1356 289.3 3.3e-76
gi|3914028|sp|Q60948.1|MAD4_MOUSE RecName: Full=Ma ( 209) 1346 287.2 1.4e-75
gi|119602940|gb|EAW82534.1| MAX dimerization prote ( 265) 1336 285.3 6.9e-75
gi|108994870|ref|XP_001118504.1| PREDICTED: simila ( 455) 1305 279.1 8.7e-73
gi|73951384|ref|XP_545921.2| PREDICTED: similar to ( 209) 1280 273.6 1.8e-71
gi|111307552|gb|AAI20231.1| MAX dimerization prote ( 209) 1268 271.1 9.9e-71
gi|6016524|sp|Q14582.2|MAD4_HUMAN RecName: Full=Ma ( 209) 1226 262.4 4.1e-68
gi|54696796|gb|AAV38770.1| MAX dimerization protei ( 210) 1226 262.4 4.1e-68
gi|126331987|ref|XP_001365277.1| PREDICTED: hypoth ( 205) 1099 236.1 3.3e-60
gi|53130290|emb|CAG31474.1| hypothetical protein [ ( 205) 1091 234.5 1e-59
gi|224050205|ref|XP_002198022.1| PREDICTED: MAD4 [ ( 205) 1076 231.4 8.8e-59
gi|197129047|gb|ACH45545.1| putative basic helix-l ( 205) 1073 230.8 1.4e-58
gi|114592898|ref|XP_517071.2| PREDICTED: MAD4 isof ( 209) 1061 228.3 7.7e-58
gi|134025403|gb|AAI35371.1| LOC100124794 protein [ ( 204) 1025 220.8 1.3e-55
gi|4838471|gb|AAD31009.1|AF127039_1 basic helix-lo ( 204) 1007 217.1 1.7e-54
gi|57033059|gb|AAH88828.1| Xmad4 protein [Xenopus ( 203) 974 210.3 2e-52
gi|74137371|dbj|BAE22039.1| unnamed protein produc ( 199) 955 206.3 3e-51
gi|148705500|gb|EDL37447.1| Max dimerization prote ( 172) 947 204.6 8.4e-51
gi|194209370|ref|XP_001488590.2| PREDICTED: simila ( 156) 940 203.1 2.1e-50
gi|119602938|gb|EAW82532.1| MAX dimerization prote ( 174) 829 180.2 1.9e-43
gi|10440522|dbj|BAB15791.1| FLJ00110 protein [Homo ( 224) 829 180.3 2.3e-43
gi|807890|emb|CAA89217.1| HW2.1 (novel protein sim ( 128) 762 166.2 2.2e-39
gi|62533223|gb|AAH93586.1| Unknown (protein for IM ( 151) 753 164.4 9.2e-39
gi|189514725|ref|XP_687970.3| PREDICTED: similar t ( 163) 737 161.2 9.6e-38
gi|4838473|gb|AAD31010.1|AF127040_1 basic helix-lo ( 236) 733 160.5 2.2e-37
gi|149047432|gb|EDM00102.1| Max dimerization prote ( 141) 717 157.0 1.5e-36
gi|123209233|emb|CAM15332.1| novel protein similar ( 221) 660 145.4 7.5e-33
gi|126304041|ref|XP_001381764.1| PREDICTED: simila ( 224) 648 142.9 4.2e-32
gi|194220648|ref|XP_001493078.2| PREDICTED: simila ( 221) 642 141.6 9.9e-32
gi|119903751|ref|XP_592508.3| PREDICTED: similar t ( 222) 641 141.4 1.1e-31
gi|219518934|gb|AAI43833.1| MXD1 protein [Homo sap ( 220) 638 140.8 1.7e-31
gi|116248535|sp|Q0VFI9.1|MAD1_XENTR RecName: Full= ( 221) 638 140.8 1.8e-31
gi|60819719|gb|AAX36510.1| MAX dimerization protei ( 221) 636 140.4 2.3e-31
gi|729978|sp|Q05195.1|MAD1_HUMAN RecName: Full=MAD ( 221) 636 140.4 2.3e-31
gi|109103270|ref|XP_001098088.1| PREDICTED: simila ( 221) 636 140.4 2.3e-31
gi|60831045|gb|AAX36955.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31
gi|60654191|gb|AAX29788.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31
gi|60827215|gb|AAX36790.1| MAX dimerization protei ( 222) 636 140.4 2.3e-31
gi|116248534|sp|Q0VH34.1|MAD1_XENLA RecName: Full= ( 221) 633 139.8 3.6e-31
gi|47219970|emb|CAG11503.1| unnamed protein produc ( 282) 620 137.2 2.8e-30
gi|149040384|gb|EDL94422.1| Max interacting protei ( 218) 594 131.7 9.5e-29
gi|73970257|ref|XP_855458.1| PREDICTED: similar to ( 377) 586 130.3 4.5e-28
gi|82207870|sp|Q7SX95.1|MAD3_DANRE RecName: Full=M ( 200) 582 129.2 5e-28
gi|55959454|emb|CAI15477.1| MAX interactor 1 [Homo ( 218) 577 128.2 1.1e-27
gi|602054|emb|CAA58168.1| MAD [Mus musculus] g ( 226) 571 127.0 2.6e-27
gi|2506888|sp|P50538.2|MAD1_MOUSE RecName: Full=MA ( 227) 561 124.9 1.1e-26
>>gi|47847420|dbj|BAD21382.1| mFLJ00110 protein [Mus mus (244 aa)
initn: 1599 init1: 1599 opt: 1599 Z-score: 1795.3 bits: 339.6 E(): 2.7e-91
Smith-Waterman score: 1599; 100.000% identity (100.000% similar) in 244 aa overlap (1-244:1-244)
10 20 30 40 50 60
mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEH
10 20 30 40 50 60
70 80 90 100 110 120
mFLJ00 GYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 GYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD
70 80 90 100 110 120
130 140 150 160 170 180
mFLJ00 STRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 STRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDS
130 140 150 160 170 180
190 200 210 220 230 240
mFLJ00 TGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 TGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGC
190 200 210 220 230 240
mFLJ00 PGLS
::::
gi|478 PGLS
>>gi|149047434|gb|EDM00104.1| Max dimerization protein 4 (261 aa)
initn: 1445 init1: 1445 opt: 1569 Z-score: 1761.4 bits: 333.5 E(): 2.1e-89
Smith-Waterman score: 1569; 98.770% identity (99.590% similar) in 244 aa overlap (1-244:19-261)
10 20 30 40
mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLL
::.:::::::::::::::::::::::: ::::::::::::::
gi|149 MCQFEGLRRRVAAQRWSPRVALVCRQARGVRRAEPAGARRAAAAA-VPCAGGRMELNSLL
10 20 30 40 50
50 60 70 80 90 100
mFLJ00 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA
60 70 80 90 100 110
110 120 130 140 150 160
mFLJ00 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK
120 130 140 150 160 170
170 180 190 200 210 220
mFLJ00 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQ
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
gi|149 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDHYSLQ
180 190 200 210 220 230
230 240
mFLJ00 SSGCSDSSYGHPCRRPGCPGLS
::::::::::::::::::::::
gi|149 SSGCSDSSYGHPCRRPGCPGLS
240 250 260
>>gi|149047433|gb|EDM00103.1| Max dimerization protein 4 (303 aa)
initn: 1433 init1: 1249 opt: 1382 Z-score: 1551.5 bits: 294.8 E(): 1e-77
Smith-Waterman score: 1382; 96.018% identity (98.230% similar) in 226 aa overlap (1-226:19-243)
10 20 30 40
mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLL
::.:::::::::::::::::::::::: ::::::::::::::
gi|149 MCQFEGLRRRVAAQRWSPRVALVCRQARGVRRAEPAGARRAAAAA-VPCAGGRMELNSLL
10 20 30 40 50
50 60 70 80 90 100
mFLJ00 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 LLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRA
60 70 80 90 100 110
110 120 130 140 150 160
mFLJ00 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 KLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLK
120 130 140 150 160 170
170 180 190 200 210 220
mFLJ00 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQ
::::::::::::::::::::::::::::::::::::::::::::::.::::::::::. .
gi|149 RRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDHYTSS
180 190 200 210 220 230
230 240
mFLJ00 SSGCSDSSYGHPCRRPGCPGLS
. :
gi|149 WAYCCAILQATAAAWSACLCLPTLRSGLKLPVPSPQGKTPCREAGSGSHILEPRVATHNL
240 250 260 270 280 290
>>gi|15030104|gb|AAH11303.1| Max dimerization protein 4 (209 aa)
initn: 1364 init1: 1364 opt: 1364 Z-score: 1533.5 bits: 291.0 E(): 1e-76
Smith-Waterman score: 1364; 100.000% identity (100.000% similar) in 209 aa overlap (36-244:1-209)
10 20 30 40 50 60
mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV
::::::::::::::::::::::::::::::
gi|150 MELNSLLLLLEAAEYLERRDREAEHGYASV
10 20 30
70 80 90 100 110 120
mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
40 50 60 70 80 90
130 140 150 160 170 180
mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
100 110 120 130 140 150
190 200 210 220 230 240
mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|150 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
160 170 180 190 200
>>gi|12841625|dbj|BAB25287.1| unnamed protein product [M (209 aa)
initn: 1356 init1: 1356 opt: 1356 Z-score: 1524.5 bits: 289.3 E(): 3.3e-76
Smith-Waterman score: 1356; 99.043% identity (100.000% similar) in 209 aa overlap (36-244:1-209)
10 20 30 40 50 60
mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV
:::::::::::::::.::::::::::::::
gi|128 MELNSLLLLLEAAEYMERRDREAEHGYASV
10 20 30
70 80 90 100 110 120
mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|128 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
40 50 60 70 80 90
130 140 150 160 170 180
mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
gi|128 TLSLLKRAKMHIKKLEEQDRRALSIKEQLRREHRFLKRRLEQLSVQSVERVRTDSTGSAV
100 110 120 130 140 150
190 200 210 220 230 240
mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|128 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
160 170 180 190 200
>>gi|3914028|sp|Q60948.1|MAD4_MOUSE RecName: Full=Max-in (209 aa)
initn: 1346 init1: 1346 opt: 1346 Z-score: 1513.3 bits: 287.2 E(): 1.4e-75
Smith-Waterman score: 1346; 98.565% identity (99.522% similar) in 209 aa overlap (36-244:1-209)
10 20 30 40 50 60
mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV
:::::::::::::::::::::::::::::.
gi|391 MELNSLLLLLEAAEYLERRDREAEHGYASM
10 20 30
70 80 90 100 110 120
mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
::::::::::::::::::::.:::::::::::::::::::::::::::: ::::::::::
gi|391 LPFDGDFARKKTKTAGLVRKGPNNRSSHNELEKHRRAKLRLYLEQLKQLGPLGPDSTRHT
40 50 60 70 80 90
130 140 150 160 170 180
mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|391 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
100 110 120 130 140 150
190 200 210 220 230 240
mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|391 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
160 170 180 190 200
>>gi|119602940|gb|EAW82534.1| MAX dimerization protein 4 (265 aa)
initn: 1268 init1: 1268 opt: 1336 Z-score: 1500.8 bits: 285.3 E(): 6.9e-75
Smith-Waterman score: 1336; 89.958% identity (94.561% similar) in 239 aa overlap (9-244:28-265)
10 20 30
mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPC---AGGRMEL
::: :::::::: :::::: :: :::::::
gi|119 MCQFEGLRRRVAAERRSPRSLEVRRPGARGGRRAEPAGAGRAAAAA-VPGRTGAGGRMEL
10 20 30 40 50
40 50 60 70 80 90
mFLJ00 NSLLLLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNELEK
::::.:::::::::::::::::::::::::::::::.:::.:::::::::::::::::::
gi|119 NSLLILLEAAEYLERRDREAEHGYASVLPFDGDFAREKTKAAGLVRKAPNNRSSHNELEK
60 70 80 90 100 110
100 110 120 130 140 150
mFLJ00 HRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQREH
::::::::::::::::::::::::::::::::::::.::::::::::::::::::::.::
gi|119 HRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEH
120 130 140 150 160 170
160 170 180 190 200 210
mFLJ00 RFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSAGSSSDADDH
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|119 RFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSSSDADDH
180 190 200 210 220 230
220 230 240
mFLJ00 YSLQSSGCSDSSYGHPCRRPGCPGLS
:::::. .::..: ::: : :.::
gi|119 YSLQSGTGGDSGFGPHCRRLGRPALS
240 250 260
>>gi|108994870|ref|XP_001118504.1| PREDICTED: similar to (455 aa)
initn: 996 init1: 996 opt: 1305 Z-score: 1463.1 bits: 279.1 E(): 8.7e-73
Smith-Waterman score: 1305; 87.295% identity (93.033% similar) in 244 aa overlap (9-244:213-455)
10 20 30
mFLJ00 RVGLVCRQARGVRRAEPAGARRAAAAAAVPC---AGGR
::: :::::::: :::::: :: ::::
gi|108 LSLMCQFEGLRRRVAAERRSPRSLEVRRPGARGGRRAEPAGAGRAAAAA-VPGGTGAGGR
190 200 210 220 230 240
40 50 60 70 80 90
mFLJ00 MELNSLLLLLEAAEYLERRDREAEHGYASVLPFDGDFARKKTKTAGLVRKAPNNRSSHNE
:::::::.:::::::::::::::::::::::::::::.:.:::.:.::::::::::::::
gi|108 MELNSLLILLEAAEYLERRDREAEHGYASVLPFDGDFTREKTKAASLVRKAPNNRSSHNE
250 260 270 280 290 300
100 110 120 130 140 150
mFLJ00 LEKHRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKMHIKKLEEQDRRALSIKEQLQ
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
gi|108 LEKHRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQ
310 320 330 340 350 360
160 170 180 190 200 210
mFLJ00 REHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQE-----VDIEGMEFGPGELDSAG
.::::::::::::::::::::::::::::::::::::: :::::::::::::::.:
gi|108 QEHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEKGEMEVDIEGMEFGPGELDSVG
370 380 390 400 410 420
220 230 240
mFLJ00 SSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
:::::::::::::.. .::..: ::: : :.::
gi|108 SSSDADDHYSLQSGSGGDSGFGPHCRRLGRPALS
430 440 450
>>gi|73951384|ref|XP_545921.2| PREDICTED: similar to Max (209 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 1439.6 bits: 273.6 E(): 1.8e-71
Smith-Waterman score: 1280; 93.301% identity (98.565% similar) in 209 aa overlap (36-244:1-209)
10 20 30 40 50 60
mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV
:. ::::.::::::::::::::::::::::
gi|739 MKRNSLLILLEAAEYLERRDREAEHGYASV
10 20 30
70 80 90 100 110 120
mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|739 LPFDGDFARKKTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
40 50 60 70 80 90
130 140 150 160 170 180
mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::::
gi|739 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSMQSLERVRTDSTGSAV
100 110 120 130 140 150
190 200 210 220 230 240
mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
::::::::::.::::::::::::.:::::.::::::::.::::..:: :::::: ::::
gi|739 STDDSEQEVDVEGMEFGPGELDSVGSSSDVDDHYSLQSGGCSDGGYGPPCRRPGRPGLS
160 170 180 190 200
>>gi|111307552|gb|AAI20231.1| MAX dimerization protein 4 (209 aa)
initn: 1268 init1: 1268 opt: 1268 Z-score: 1426.1 bits: 271.1 E(): 9.9e-71
Smith-Waterman score: 1268; 92.344% identity (98.565% similar) in 209 aa overlap (36-244:1-209)
10 20 30 40 50 60
mFLJ00 CRQARGVRRAEPAGARRAAAAAAVPCAGGRMELNSLLLLLEAAEYLERRDREAEHGYASV
:::::::.::::::::::::::::::::::
gi|111 MELNSLLILLEAAEYLERRDREAEHGYASV
10 20 30
70 80 90 100 110 120
mFLJ00 LPFDGDFARKKTKTAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|111 LPFDGDFARKKTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT
40 50 60 70 80 90
130 140 150 160 170 180
mFLJ00 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSVQSVERVRTDSTGSAV
::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::::
gi|111 TLSLLKRAKMHIKKLEEQDRRALSIKEQLQREHRFLKRRLEQLSAQSLERVRTDSTGSAV
100 110 120 130 140 150
190 200 210 220 230 240
mFLJ00 STDDSEQEVDIEGMEFGPGELDSAGSSSDADDHYSLQSSGCSDSSYGHPCRRPGCPGLS
::::::::::.::::::::::::.::.::.::::::...::: .:.: :::::: ::::
gi|111 STDDSEQEVDVEGMEFGPGELDSVGSGSDVDDHYSLRGGGCSHGSFGPPCRRPGRPGLS
160 170 180 190 200
244 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Thu Mar 12 17:25:09 2009 done: Thu Mar 12 17:30:20 2009
Total Scan time: 729.230 Total Display time: 0.040
Function used was FASTA [version 34.26.5 April 26, 2007]