# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj01010.fasta.nr -Q ../query/mKIAA1491.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1491, 393 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7911188 sequences Expectation_n fit: rho(ln(x))= 6.9946+/-0.000203; mu= 2.8310+/- 0.011 mean_var=131.7093+/-24.976, 0's: 42 Z-trim: 73 B-trim: 89 in 1/65 Lambda= 0.111755 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|13529524|gb|AAH05482.1| Ubap2 protein [Mus musc ( 700) 2687 444.3 4e-122 gi|123229112|emb|CAM20986.1| ubiquitin-associated (1131) 2687 444.4 5.8e-122 gi|81879516|sp|Q91VX2.1|UBAP2_MOUSE RecName: Full= (1132) 2687 444.4 5.8e-122 gi|27764457|gb|AAO23024.1|AF276965_1 lingerer prot (1132) 2687 444.4 5.8e-122 gi|73971136|ref|XP_538705.2| PREDICTED: similar to (1076) 2401 398.3 4.2e-108 gi|73971140|ref|XP_852397.1| PREDICTED: similar to (1129) 2401 398.3 4.4e-108 gi|73971138|ref|XP_865613.1| PREDICTED: similar to (1135) 2401 398.3 4.4e-108 gi|149736922|ref|XP_001499522.1| PREDICTED: ubiqui (1129) 2368 393.0 1.7e-106 gi|114624451|ref|XP_528586.2| PREDICTED: ubiquitin (1119) 2359 391.5 4.7e-106 gi|22760618|dbj|BAC11266.1| unnamed protein produc ( 597) 2348 389.6 9.9e-106 gi|119578880|gb|EAW58476.1| hCG1811260, isoform CR ( 786) 2348 389.7 1.2e-105 gi|194382714|dbj|BAG64527.1| unnamed protein produ ( 852) 2348 389.7 1.3e-105 gi|119578879|gb|EAW58475.1| hCG1811260, isoform CR ( 929) 2348 389.7 1.4e-105 gi|194380398|dbj|BAG63966.1| unnamed protein produ (1028) 2348 389.7 1.5e-105 gi|74745207|sp|Q5T6F2.1|UBAP2_HUMAN RecName: Full= (1119) 2343 389.0 2.8e-105 gi|194387630|dbj|BAG61228.1| unnamed protein produ ( 874) 2328 386.5 1.2e-104 gi|149045660|gb|EDL98660.1| ubiquitin-associated p (1127) 2323 385.7 2.7e-104 gi|194669591|ref|XP_001787582.1| PREDICTED: simila (1143) 2294 381.1 6.9e-103 gi|57162228|emb|CAI39659.1| ubiquitin associated p ( 358) 2230 370.4 3.5e-100 gi|193786612|dbj|BAG51935.1| unnamed protein produ ( 358) 2224 369.4 6.9e-100 gi|7688705|gb|AAF67493.1|AF157327_1 AD-012 protein ( 583) 2187 363.6 6.3e-98 gi|224090131|ref|XP_002188986.1| PREDICTED: ubiqui (1107) 2121 353.2 1.7e-94 gi|218675763|gb|AAI69324.2| ubiquitin associated p ( 312) 1988 331.3 1.8e-88 gi|118103376|ref|XP_001236334.1| PREDICTED: simila (1103) 1966 328.2 5.6e-87 gi|119578881|gb|EAW58477.1| hCG1811260, isoform CR ( 290) 1831 306.0 7e-81 gi|37778657|gb|AAP21493.1| AD012W [Gallus gallus] ( 311) 1783 298.3 1.6e-78 gi|37778648|gb|AAP21489.1| AD012Z [Gallus gallus] ( 305) 1778 297.5 2.7e-78 gi|37778663|gb|AAP21495.1| AD012W [Gallus gallus] ( 311) 1767 295.7 9.4e-78 gi|37778655|gb|AAP21492.1| AD012W [Gallus gallus] ( 312) 1761 294.7 1.8e-77 gi|37778667|gb|AAP21497.1| AD012W [Gallus gallus] ( 312) 1746 292.3 9.9e-77 gi|37778665|gb|AAP21496.1| AD012W [Gallus gallus] ( 312) 1742 291.7 1.5e-76 gi|37778652|gb|AAP21491.1| AD012W [Gallus gallus] ( 306) 1734 290.4 3.7e-76 gi|37778650|gb|AAP21490.1| AD012W [Gallus gallus] ( 307) 1732 290.0 4.7e-76 gi|39644814|gb|AAH07890.1| UBAP2 protein [Homo sap ( 263) 1660 278.4 1.3e-72 gi|37778641|gb|AAP21486.1| AD012W [Meleagris gallo ( 360) 1623 272.5 1e-70 gi|156763537|gb|ABU94635.1| ADO12W [Gallus gallus] ( 594) 1535 258.5 2.8e-66 gi|194378952|dbj|BAG58027.1| unnamed protein produ ( 892) 1273 216.4 2e-53 gi|126631262|gb|AAI33739.1| Zgc:158449 protein [Da (1168) 1261 214.5 9.6e-53 gi|37778646|gb|AAP21488.1| AD012W [Acrocephalus ar ( 205) 1147 195.6 8.4e-48 gi|210106426|gb|EEA54410.1| hypothetical protein B (1225) 1154 197.3 1.6e-47 gi|149409863|ref|XP_001506527.1| PREDICTED: simila (1476) 1152 197.0 2.2e-47 gi|37778644|gb|AAP21487.1| AD012Z [Acrocephalus ar ( 188) 1064 182.2 8.4e-44 gi|47219481|emb|CAG10845.1| unnamed protein produc (1030) 1040 178.9 4.6e-42 gi|37778659|gb|AAP21494.1| AD012W [Gallus gallus] ( 317) 1016 174.6 2.7e-41 gi|224084050|ref|XP_002189517.1| PREDICTED: ubiqui (1087) 1010 174.0 1.4e-40 gi|26331464|dbj|BAC29462.1| unnamed protein produc ( 389) 995 171.3 3.3e-40 gi|11991481|emb|CAB65101.2| NICE-4 protein [Homo s ( 398) 995 171.3 3.4e-40 gi|76661353|ref|XP_869509.1| PREDICTED: similar to ( 441) 995 171.3 3.6e-40 gi|74189503|dbj|BAE36765.1| unnamed protein produc ( 508) 995 171.4 4.1e-40 gi|149048023|gb|EDM00599.1| rCG62582, isoform CRA_ ( 758) 995 171.5 5.6e-40 >>gi|13529524|gb|AAH05482.1| Ubap2 protein [Mus musculus (700 aa) initn: 2687 init1: 2687 opt: 2687 Z-score: 2348.9 bits: 444.3 E(): 4e-122 Smith-Waterman score: 2687; 100.000% identity (100.000% similar) in 393 aa overlap (1-393:308-700) 10 20 30 mKIAA1 PHTHASVESTASSAAFSAAATSAPSAPSSG :::::::::::::::::::::::::::::: gi|135 SSSPLSQLSSSLSGHQNSMTSAHATRSTSTPHTHASVESTASSAAFSAAATSAPSAPSSG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA1 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA1 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA1 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA1 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST 520 530 540 550 560 570 280 290 300 310 320 330 mKIAA1 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA1 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY 640 650 660 670 680 690 mKIAA1 WTN ::: gi|135 WTN 700 >>gi|123229112|emb|CAM20986.1| ubiquitin-associated prot (1131 aa) initn: 2687 init1: 2687 opt: 2687 Z-score: 2346.0 bits: 444.4 E(): 5.8e-122 Smith-Waterman score: 2687; 100.000% identity (100.000% similar) in 393 aa overlap (1-393:739-1131) 10 20 30 mKIAA1 PHTHASVESTASSAAFSAAATSAPSAPSSG :::::::::::::::::::::::::::::: gi|123 SSSPLSQLSSSLSGHQNSMTSAHATRSTSTPHTHASVESTASSAAFSAAATSAPSAPSSG 710 720 730 740 750 760 40 50 60 70 80 90 mKIAA1 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG 770 780 790 800 810 820 100 110 120 130 140 150 mKIAA1 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA 830 840 850 860 870 880 160 170 180 190 200 210 mKIAA1 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP 890 900 910 920 930 940 220 230 240 250 260 270 mKIAA1 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST 950 960 970 980 990 1000 280 290 300 310 320 330 mKIAA1 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA 1010 1020 1030 1040 1050 1060 340 350 360 370 380 390 mKIAA1 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY 1070 1080 1090 1100 1110 1120 mKIAA1 WTN ::: gi|123 WTN 1130 >>gi|81879516|sp|Q91VX2.1|UBAP2_MOUSE RecName: Full=Ubiq (1132 aa) initn: 2687 init1: 2687 opt: 2687 Z-score: 2346.0 bits: 444.4 E(): 5.8e-122 Smith-Waterman score: 2687; 100.000% identity (100.000% similar) in 393 aa overlap (1-393:740-1132) 10 20 30 mKIAA1 PHTHASVESTASSAAFSAAATSAPSAPSSG :::::::::::::::::::::::::::::: gi|818 SSSPLSQLSSSLSGHQNSMTSAHATRSTSTPHTHASVESTASSAAFSAAATSAPSAPSSG 710 720 730 740 750 760 40 50 60 70 80 90 mKIAA1 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG 770 780 790 800 810 820 100 110 120 130 140 150 mKIAA1 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA 830 840 850 860 870 880 160 170 180 190 200 210 mKIAA1 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP 890 900 910 920 930 940 220 230 240 250 260 270 mKIAA1 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST 950 960 970 980 990 1000 280 290 300 310 320 330 mKIAA1 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA 1010 1020 1030 1040 1050 1060 340 350 360 370 380 390 mKIAA1 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY 1070 1080 1090 1100 1110 1120 mKIAA1 WTN ::: gi|818 WTN 1130 >>gi|27764457|gb|AAO23024.1|AF276965_1 lingerer protein- (1132 aa) initn: 2687 init1: 2687 opt: 2687 Z-score: 2346.0 bits: 444.4 E(): 5.8e-122 Smith-Waterman score: 2687; 100.000% identity (100.000% similar) in 393 aa overlap (1-393:740-1132) 10 20 30 mKIAA1 PHTHASVESTASSAAFSAAATSAPSAPSSG :::::::::::::::::::::::::::::: gi|277 SSSPLSQLSSSLSGHQNSMTSAHATRSTSTPHTHASVESTASSAAFSAAATSAPSAPSSG 710 720 730 740 750 760 40 50 60 70 80 90 mKIAA1 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 VVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGPGG 770 780 790 800 810 820 100 110 120 130 140 150 mKIAA1 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 LLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGDSA 830 840 850 860 870 880 160 170 180 190 200 210 mKIAA1 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 SPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFVPP 890 900 910 920 930 940 220 230 240 250 260 270 mKIAA1 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 TSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNKST 950 960 970 980 990 1000 280 290 300 310 320 330 mKIAA1 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 GSGPGKGVSVSSGTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAPAAA 1010 1020 1030 1040 1050 1060 340 350 360 370 380 390 mKIAA1 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|277 PGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGSAPY 1070 1080 1090 1100 1110 1120 mKIAA1 WTN ::: gi|277 WTN 1130 >>gi|73971136|ref|XP_538705.2| PREDICTED: similar to ubi (1076 aa) initn: 1675 init1: 1675 opt: 2401 Z-score: 2097.1 bits: 398.3 E(): 4.2e-108 Smith-Waterman score: 2401; 89.394% identity (95.455% similar) in 396 aa overlap (2-393:681-1076) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS ::::::::. : ::.::.:.::: .: : gi|739 SSPLSQLSSSLSSHQSSLSSAHAALSSSTSHTHASVESAPSLQSSATFSTAVTSASGATS 660 670 680 690 700 710 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::. ::.::.::.::::::::::.:::::::: ::::::::::::::::::::::::::: gi|739 SGLSLPSSMNTVNSLCLGGTTVSAPSSSTRATPLVTSGKAPPNLPQGVPPLLHNQYLVGP 720 730 740 750 760 770 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD ::::::::::::::::::::::::::::::::.:::::::::.::::::::::::::::: gi|739 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFATPTALASRDGSLANNPYSGDVTKFGRGD 780 790 800 810 820 830 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV ::::::::: :: ::::::.:::::::::::.:::::::::::::::::::::::::::: gi|739 SASPAPPTTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYTGVPSAFQYGPTMFV 840 850 860 870 880 890 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.::::::: :::: ::::::::::::.:::::::::::::::::::::::::::: :: gi|739 PPASAKQHGVNLSTPTTPFQQASGYGQHSYSTGYDDLTQGTAAGDYTKGGYGGSSQAQNK 900 910 920 930 940 950 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::::::.: :::::::::::::::::::::::::::::::::::::.:::: gi|739 SAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSAGPLAA 960 970 980 990 1000 1010 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|739 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 1020 1030 1040 1050 1060 1070 390 mKIAA1 APYWTN .::::: gi|739 SPYWTN >>gi|73971140|ref|XP_852397.1| PREDICTED: similar to ubi (1129 aa) initn: 1675 init1: 1675 opt: 2401 Z-score: 2096.8 bits: 398.3 E(): 4.4e-108 Smith-Waterman score: 2401; 89.394% identity (95.455% similar) in 396 aa overlap (2-393:734-1129) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS ::::::::. : ::.::.:.::: .: : gi|739 SSPLSQLSSSLSSHQSSLSSAHAALSSSTSHTHASVESAPSLQSSATFSTAVTSASGATS 710 720 730 740 750 760 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::. ::.::.::.::::::::::.:::::::: ::::::::::::::::::::::::::: gi|739 SGLSLPSSMNTVNSLCLGGTTVSAPSSSTRATPLVTSGKAPPNLPQGVPPLLHNQYLVGP 770 780 790 800 810 820 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD ::::::::::::::::::::::::::::::::.:::::::::.::::::::::::::::: gi|739 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFATPTALASRDGSLANNPYSGDVTKFGRGD 830 840 850 860 870 880 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV ::::::::: :: ::::::.:::::::::::.:::::::::::::::::::::::::::: gi|739 SASPAPPTTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYTGVPSAFQYGPTMFV 890 900 910 920 930 940 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.::::::: :::: ::::::::::::.:::::::::::::::::::::::::::: :: gi|739 PPASAKQHGVNLSTPTTPFQQASGYGQHSYSTGYDDLTQGTAAGDYTKGGYGGSSQAQNK 950 960 970 980 990 1000 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::::::.: :::::::::::::::::::::::::::::::::::::.:::: gi|739 SAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSAGPLAA 1010 1020 1030 1040 1050 1060 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|739 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 1070 1080 1090 1100 1110 1120 390 mKIAA1 APYWTN .::::: gi|739 SPYWTN >>gi|73971138|ref|XP_865613.1| PREDICTED: similar to ubi (1135 aa) initn: 1675 init1: 1675 opt: 2401 Z-score: 2096.8 bits: 398.3 E(): 4.4e-108 Smith-Waterman score: 2401; 89.394% identity (95.455% similar) in 396 aa overlap (2-393:740-1135) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS ::::::::. : ::.::.:.::: .: : gi|739 SSPLSQLSSSLSSHQSSLSSAHAALSSSTSHTHASVESAPSLQSSATFSTAVTSASGATS 710 720 730 740 750 760 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::. ::.::.::.::::::::::.:::::::: ::::::::::::::::::::::::::: gi|739 SGLSLPSSMNTVNSLCLGGTTVSAPSSSTRATPLVTSGKAPPNLPQGVPPLLHNQYLVGP 770 780 790 800 810 820 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD ::::::::::::::::::::::::::::::::.:::::::::.::::::::::::::::: gi|739 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFATPTALASRDGSLANNPYSGDVTKFGRGD 830 840 850 860 870 880 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV ::::::::: :: ::::::.:::::::::::.:::::::::::::::::::::::::::: gi|739 SASPAPPTTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYTGVPSAFQYGPTMFV 890 900 910 920 930 940 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.::::::: :::: ::::::::::::.:::::::::::::::::::::::::::: :: gi|739 PPASAKQHGVNLSTPTTPFQQASGYGQHSYSTGYDDLTQGTAAGDYTKGGYGGSSQAQNK 950 960 970 980 990 1000 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::::::.: :::::::::::::::::::::::::::::::::::::.:::: gi|739 SAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSAGPLAA 1010 1020 1030 1040 1050 1060 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|739 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 1070 1080 1090 1100 1110 1120 390 mKIAA1 APYWTN .::::: gi|739 SPYWTN 1130 >>gi|149736922|ref|XP_001499522.1| PREDICTED: ubiquitin (1129 aa) initn: 1631 init1: 1631 opt: 2368 Z-score: 2068.0 bits: 393.0 E(): 1.7e-106 Smith-Waterman score: 2368; 87.626% identity (95.455% similar) in 396 aa overlap (2-393:734-1129) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS :::::.::: : ::.::..:::: :: : gi|149 SSPLSQLSSSLSSHQSSLSSAHAALSSSTSHTHASMESTPSLQSSATFSTSATSASSAVS 710 720 730 740 750 760 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::. ::.:...:.::::::::.:.:::::::: ::::::::::::::::::::::::::: gi|149 SGLSLPSSVNAVNSLCLGGTTMSAPSSSTRATPLVTSGKAPPNLPQGVPPLLHNQYLVGP 770 780 790 800 810 820 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD :::::::::::::::::::::::.::::::::.:::::::::.::::::::::::::::: gi|149 GGLLPAYPIYGYDELQMLQSRLPVDYYGIPFATPTALASRDGSLANNPYSGDVTKFGRGD 830 840 850 860 870 880 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV ::::::::: :: ::::::.:::::::::::.::::::::::::: :::::::::::::: gi|149 SASPAPPTTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYPGVPSAFQYGPTMFV 890 900 910 920 930 940 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.:::::::.:::: .:::::..::::.:::::::::::::::::::::::::::: :: gi|149 PPASAKQHGVSLSTPAAPFQQAGAYGQHGYSTGYDDLTQGTAAGDYTKGGYGGSSQAQNK 950 960 970 980 990 1000 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::.:::.: ::::: ::::::::::::::::::::::::::::::::::::: gi|149 SAGSGPGKGVAVSSSTTGLPDMPGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP 1010 1020 1030 1040 1050 1060 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|149 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 1070 1080 1090 1100 1110 1120 390 mKIAA1 APYWTN .::::: gi|149 SPYWTN >>gi|114624451|ref|XP_528586.2| PREDICTED: ubiquitin ass (1119 aa) initn: 1614 init1: 1614 opt: 2359 Z-score: 2060.3 bits: 391.5 E(): 4.7e-106 Smith-Waterman score: 2359; 87.121% identity (94.949% similar) in 396 aa overlap (2-393:724-1119) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS ::::::::..: ::.::.::::. :. : gi|114 TSSPLSQLSSSLSSHQSSLSAHAALSSSTSHTHASVESASSHQSSATFSTAATSVSSSAS 700 710 720 730 740 750 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::: : .::.:..::::::: .:. :::.::. ::::::::::::::::::::::::::: gi|114 SGVSLSSSMNTANSLCLGGTPASASSSSSRAAPLVTSGKAPPNLPQGVPPLLHNQYLVGP 760 770 780 790 800 810 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD :::::::::::::::::::::::.::::::::::::::::::.:::::: :::::::::: gi|114 GGLLPAYPIYGYDELQMLQSRLPVDYYGIPFAAPTALASRDGSLANNPYPGDVTKFGRGD 820 830 840 850 860 870 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV ::::.: ::::: ::::::::::::::::::.:::::::::::::::.:::::::::::: gi|114 SASPVPATTPAQPQQSQSQTHHTAQQPFLNPALPPGYSYTGLPYYTGMPSAFQYGPTMFV 880 890 900 910 920 930 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.::::::: :::: :::::::::::.::::.::::::::::::.::::.:::::::: gi|114 PPASAKQHGVNLSTPTPPFQQASGYGQHGYSTGFDDLTQGTAAGDYSKGGYAGSSQAPNK 940 950 960 970 980 990 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::::::.: ::::::::::::::::::::::::::::::::::::::::::: gi|114 SAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP 1000 1010 1020 1030 1040 1050 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|114 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 1060 1070 1080 1090 1100 1110 390 mKIAA1 APYWTN .::::: gi|114 SPYWTN >>gi|22760618|dbj|BAC11266.1| unnamed protein product [H (597 aa) initn: 1619 init1: 1619 opt: 2348 Z-score: 2054.5 bits: 389.6 E(): 9.9e-106 Smith-Waterman score: 2348; 86.869% identity (94.697% similar) in 396 aa overlap (2-393:202-597) 10 20 mKIAA1 PHTHASVESTAS---SAAFSAAATSAPSAPS ::::::::..: ::.::.::::. :. : gi|227 TSSPLSQLSSSLSSHQSSLSAHAALSSSTSHTHASVESASSHQSSATFSTAATSVSSSAS 180 190 200 210 220 230 30 40 50 60 70 80 mKIAA1 SGVVLPGSMSTVSSLCLGGTTVSVPSSSTRATALVTSGKAPPNLPQGVPPLLHNQYLVGP ::: : .::.:..::::::: .:. :::.::. ::::::::::::::::::::::::::: gi|227 SGVSLSSSMNTANSLCLGGTPASASSSSSRAAPLVTSGKAPPNLPQGVPPLLHNQYLVGP 240 250 260 270 280 290 90 100 110 120 130 140 mKIAA1 GGLLPAYPIYGYDELQMLQSRLPMDYYGIPFAAPTALASRDGNLANNPYSGDVTKFGRGD :::::::::::::::::::::::.::::::::::::::::::.:::::: :::::::::: gi|227 GGLLPAYPIYGYDELQMLQSRLPVDYYGIPFAAPTALASRDGSLANNPYPGDVTKFGRGD 300 310 320 330 340 350 150 160 170 180 190 200 mKIAA1 SASPAPPTTPAQAQQSQSQTHHTAQQPFLNPGLPPGYSYTGLPYYTGVPSAFQYGPTMFV :::::: ::::: :::::::::::::::.::.:::::::::::::::.:::::::::::: gi|227 SASPAPATTPAQPQQSQSQTHHTAQQPFVNPALPPGYSYTGLPYYTGMPSAFQYGPTMFV 360 370 380 390 400 410 210 220 230 240 250 260 mKIAA1 PPTSAKQHGVALSTPPTPFQQASGYGQHAYSTGYDDLTQGTAAGDYTKGGYGGSSQAPNK ::.::::::: :::: :::::::::::.:::::::::::::::::.::::.:::::::: gi|227 PPASAKQHGVNLSTPTPPFQQASGYGQHGYSTGYDDLTQGTAAGDYSKGGYAGSSQAPNK 420 430 440 450 460 470 270 280 290 300 310 320 mKIAA1 STGSGPGKGVSVSSGT-GLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLAP :.::::::::::::.: :::::::::::::::::::::::::::::::::.:::::::: gi|227 SAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLAS 480 490 500 510 520 530 330 340 350 360 370 380 mKIAA1 AAAPGYAPAPFLHIMPAHQQPHSQLLHHHLQQDAPSGSGQRSQPSSLQPKSQASKPTYGS .::::::: :::::.::::::::::::::: ::: :::::::::::::::::::::.::. gi|227 GAAPGYAPPPFLHILPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGN 540 550 560 570 580 590 390 mKIAA1 APYWTN .::::: gi|227 SPYWTN 393 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 13:13:45 2009 done: Sat Mar 14 13:20:09 2009 Total Scan time: 873.400 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]