FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1876.ptfa, 348 aa vs ./tmplib.26680 library 1768669 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.7615+/-0.00426; mu= 20.0503+/- 0.286 mean_var=79.4415+/-17.552, 0's: 0 Z-trim: 10 B-trim: 8 in 1/35 Lambda= 0.1439 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0388 ( 758 res) mbh00510 ( 758) 323 77 5.1e-15 mKIAA1420 ( 907 res) mfj05028 ( 907) 317 75 1.3e-14 mKIAA4065 ( 779 res) mpj03374 ( 779) 311 74 2.9e-14 mKIAA1090 ( 857 res) mph00524 ( 857) 301 72 1.3e-13 mKIAA0067 ( 1162 res) mbg05662 (1162) 281 68 2.7e-12 mKIAA0304 ( 1744 res) mbg06324 (1744) 255 63 1.4e-10 mKIAA1506 ( 1520 res) mbg19167 (1520) 254 63 1.5e-10 mKIAA1076 ( 855 res) mbh01320 ( 855) 240 59 8.5e-10 mKIAA0339 ( 822 res) mph02448 ( 822) 230 57 3.5e-09 mKIAA1757 ( 1450 res) mbg10960 (1450) 169 45 3.1e-05 >>mKIAA0388 ( 758 res) mbh00510 (758 aa) initn: 238 init1: 114 opt: 323 Z-score: 361.9 bits: 76.6 E(): 5.1e-15 Smith-Waterman score: 323; 33.014% identity (38.122% ungapped) in 209 aa overlap (87-282:545-738) 60 70 80 90 100 110 mKIAA1 GYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNIDRNITHLQYCVCVDDCSSSTCMCG : : . .:. . ..: : ::.. : mKIAA0 CRKIQLKKDNNSTQVYNYQPCDHPDRPCDSTCPCIMTQNFCE-KFCQCSPDCQNRFPGC- 520 530 540 550 560 570 120 130 140 150 160 mKIAA1 QLSMRCWYDKDGRLLPEF---NMAEPPLIFECNHACSCWR----NCRNRVVQNGLRARLQ :: . . . : . .: : . :. : : .:.: .: ::. .: mKIAA0 ----RCKTQCNTKQCPCYLAVRECDPDLCLTCG-ASEHWDCKVVSCKNCSIQRGLKKHLL 580 590 600 610 620 170 180 190 200 210 220 mKIAA1 LYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVREE------DSYLFDLDNKDGE : .. :::. ... . :. :: :::::..::: : . .:.::.:.: mKIAA0 LAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNND--- 630 640 650 660 670 680 230 240 250 260 270 280 mKIAA1 VYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYG . .:: :: :: :: .:: ..: : . : ::..:. : :::::.: ::: mKIAA0 -FVVDATRKGNKIRFANHSVNPNCY-AKVVMVNGD---HRIGIFAKRAIQAGEELFFDYR 690 700 710 720 730 290 300 310 320 330 340 mKIAA1 ERFWDVKGKLFSCRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMK mKIAA0 YSQADALKYVGIERETDVF 740 750 >>mKIAA1420 ( 907 res) mfj05028 (907 aa) initn: 313 init1: 105 opt: 317 Z-score: 354.4 bits: 75.4 E(): 1.3e-14 Smith-Waterman score: 317; 30.693% identity (34.831% ungapped) in 202 aa overlap (141-331:56-244) 120 130 140 150 160 mKIAA1 STCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIF-ECN-HACSCWRNCRNRVVQNGLRAR- .:: ::. ..: : ..: :. .: .. mKIAA1 PLSGYEATTCNCKKPDDDTRKGCGDDCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQC 30 40 50 60 70 80 170 180 190 200 210 220 mKIAA1 LQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVR-------EEDSYLFDLDNK :. .:... :::.:. . . : :. ::.::..:..: : . : : ..::. mKIAA1 LERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDS- 90 100 110 120 130 140 230 240 250 260 270 mKIAA1 DGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLR-FPRIAFFSTRLIQAGEQLG : : ::. .:: .::::: :.:: :.. .. ::.... . . :: .: mKIAA1 -GMV--IDSYRMGNEARFINHSCDPN-----CEMQKWSVNGVYRIGLYALKDMPAGTELT 150 160 170 180 190 280 290 300 310 320 330 mKIAA1 FDYGERFWDVKGKLFSCRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPL .::. . ..:. . . :.:: ::: .. .::. . :...: ..:. mKIAA1 YDYNFHSFNVEKQQL-CKCGFEKCRGIIGGKSQRMNGL---PSHKGSQSSSTHRKSARAK 200 210 220 230 240 250 340 mKIAA1 ILMKCGFAF mKIAA1 EKRKSKHKLKKRKGHPSEEPSENINTPTRLTPQLQMKPMSNRERNFVLKHHVFLVRNWEK 260 270 280 290 300 310 >>mKIAA4065 ( 779 res) mpj03374 (779 aa) initn: 250 init1: 97 opt: 311 Z-score: 348.3 bits: 74.1 E(): 2.9e-14 Smith-Waterman score: 311; 32.710% identity (37.838% ungapped) in 214 aa overlap (83-282:561-759) 60 70 80 90 100 110 mKIAA1 DIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTS-PMNIDRNITHLQYCVCVDDCSSS : : .: : : .:. . ..: : ..:.. mKIAA4 LWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQNFCE-KFCQCSSECQNR 540 550 560 570 580 120 130 140 150 160 mKIAA1 TCMCGQLSMRCWYDKDGRLLPEF---NMAEPPLIFECNHACSCW--RN--CRNRVVQNGL : :: . . . : . .: : . :. : . : .: :.: .: : mKIAA4 FPGC-----RCKAQCNTKQCPCYLAVRECDPDLCLTCG-AADHWDSKNVSCKNCSIQRGS 590 600 610 620 630 640 170 180 190 200 210 mKIAA1 RARLQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVREE--D----SYLFDLD . .: : .. :::. . . . :. :: ::.::..::: : . : :.::.:. mKIAA4 KKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLN 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 NKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQL : . .:: :: :: :: .:: ..:.: . : ::..:. : ::.::.: mKIAA4 ND----FVVDATRKGNKIRFANHSVNPNCY-AKVMMVNGD---HRIGIFAKRAIQTGEEL 710 720 730 740 750 280 290 300 310 320 330 mKIAA1 GFDYGERFWDVKGKLFSCRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPP ::: mKIAA4 FFDYRYSQADALKYVGIEREMEIP 760 770 >>mKIAA1090 ( 857 res) mph00524 (857 aa) initn: 238 init1: 113 opt: 301 Z-score: 336.7 bits: 72.1 E(): 1.3e-13 Smith-Waterman score: 311; 30.189% identity (35.242% ungapped) in 265 aa overlap (70-325:475-710) 40 50 60 70 80 90 mKIAA1 PDKPVAVEKTVSRDIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNI-DRNITH .:: : ::... : . ..: .:.. mKIAA1 GIGRVFKNALQEAEARFNEVKLQREARETQESERKPPPYKHIKVNKPYGKVQIYTADISE 450 460 470 480 490 500 100 110 120 130 140 150 mKIAA1 LQYCVCVDDCSSSTCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECN-HACSCWRNCRN . : : .. ::. : .: .:.: .:::. ..: . :.: mKIAA1 IPKCNCKP---TDENPCGSDS-ECL----NRML----------MFECHPQVCPAGEYCQN 510 520 530 540 160 170 180 190 200 210 mKIAA1 RVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVR-----EEDS . . . .. .:. :::. . .:: : :: :::::::.. : .: :.: mKIAA1 QCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKYAHENDI 550 560 570 580 590 600 220 230 240 250 260 270 mKIAA1 YLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLI : . . : . ::: :: :::.:: :.:: .. .. . :...:.. : mKIAA1 THFYMLTIDKD-RIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDT----RVGLFAVCDI 610 620 630 640 650 660 280 290 300 310 320 330 mKIAA1 QAGEQLGFDYGERFWDVKGKLFS-CRCGSSKCRHSSAALAQR-QASAAQEPQENGLPDTS :: .: :.:. : :. . ::::.:.: :. :..: ..::. .:.: mKIAA1 PAGTELTFNYN---LDCLGNEKTVCRCGASNC---SGFLGDRPKTSASLSSEEKGKKAKK 670 680 690 700 710 340 mKIAA1 SAAAADPPLILMKCGFAF mKIAA1 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH 720 730 740 750 760 770 >>mKIAA0067 ( 1162 res) mbg05662 (1162 aa) initn: 543 init1: 271 opt: 281 Z-score: 313.0 bits: 68.1 E(): 2.7e-12 Smith-Waterman score: 381; 35.912% identity (39.877% ungapped) in 181 aa overlap (53-219:555-731) 30 40 50 60 70 80 mKIAA1 SQVWSALQMSKALRDSAPDKPVAVEKTVSRDIARGYERIPIPCVNAVDSELCPTNYKYVS ::. : : .:. ::: .:. : . : . mKIAA0 DFLFLEMFCLDPYVLVDRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTP-PPQVAYSK 530 540 550 560 570 580 90 100 110 120 130 mKIAA1 QNCVTSPMNIDRNITHLQYCVCVDDCSSSTCMCGQLSMR---CWYDKDGRLLP----EFN . . . :. . : : : : : .. : : ::... : :.. : ... mKIAA0 ERIPGKGVFINTGPEFLVGCDCKDGCRDK-CACHQLTIQATAC--TPGGQVNPNSGYQYK 590 600 610 620 630 640 140 150 160 170 180 190 mKIAA1 MAE---PPLIFECNHACSCWRN-CRNRVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTF : : ..:::. :.: : : ::.::.::..::::..::. :::.: :.:: :.: mKIAA0 RLEECLPTGVYECNKRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSF 650 660 670 680 690 700 200 210 220 230 240 mKIAA1 VCEYVGELISDSEAD---VREEDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLV :: :.:....:. :: .. : :. .::. mKIAA0 VCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPTSSDSSGVDMKDQ 710 720 730 740 750 760 250 260 270 280 290 300 mKIAA1 PVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFSCRCGSSKCRHSSA mKIAA0 EDGNSGSEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENELSEMTSKDSR 770 780 790 800 810 820 >>mKIAA0304 ( 1744 res) mbg06324 (1744 aa) initn: 187 init1: 106 opt: 255 Z-score: 282.1 bits: 63.0 E(): 1.4e-10 Smith-Waterman score: 255; 32.692% identity (36.429% ungapped) in 156 aa overlap (156-304:1594-1740) 130 140 150 160 170 180 mKIAA1 KDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTQDMGWGVRSLQD : : ... . . .::. : :. .. mKIAA0 PEGATCDEEEDEVQLRSTRRATSLELPMAMRFRHLKKTSKEAVGVYRSAIHGRGLFCKRN 1570 1580 1590 1600 1610 1620 190 200 210 220 230 mKIAA1 IPLGTFVCEYVGELISDSEADVREE-------DSYLFDLDNKDGEVYCIDARFYGNVSRF : : .: :: : .: . .: ::. :.: .:. : .:: ..::..:: mKIAA0 IDAGEMVIEYSGIVIRSVLTDKREKFYDGKGIGCYMFRMDDFD----VVDATMHGNAARF 1630 1640 1650 1660 1670 240 250 260 270 280 290 mKIAA1 INHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFSCRC ::: :::: . . : .:..:. : : ::.: .:: . :...:: : : mKIAA0 INHSCEPNCFSRVIHVEGQK----HIVIFALRRILRGEELTYDYKFPIEDASNKL-PCNC 1680 1690 1700 1710 1720 1730 300 310 320 330 340 mKIAA1 GSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMKCGFAF :...::. mKIAA0 GAKRCRRFLN 1740 >>mKIAA1506 ( 1520 res) mbg19167 (1520 aa) initn: 220 init1: 87 opt: 254 Z-score: 281.6 bits: 62.7 E(): 1.5e-10 Smith-Waterman score: 254; 32.075% identity (35.664% ungapped) in 159 aa overlap (153-304:1367-1516) 130 140 150 160 170 180 mKIAA1 WYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTQDMGWGVRS .. . : ... .. . : :.. .: :. . mKIAA1 TLNSTSTSKSFQSTVTGELNAPYSKQFVHSKSSQYRRMKTEWKSNVYLARSRIQGLGLYA 1340 1350 1360 1370 1380 1390 190 200 210 220 230 mKIAA1 LQDIPLGTFVCEYVGELISDSEADVREE-------DSYLFDLDNKDGEVYCIDARFYGNV .:: :.: ::.: .: . :. .:. :.: .:: . ::: . :. mKIAA1 ARDIEKHTMVIEYIGTIIRNEVANRKEKLYESQNRGVYMFRMDND----HVIDATLTGGP 1400 1410 1420 1430 1440 1450 240 250 260 270 280 290 mKIAA1 SRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFS .:.::: : :: : : . : .: . :.: :: ::.: .:: : : . :. mKIAA1 ARYINHSCAPNCVAEVVTFE----RGHKIIISSNRRIQKGEELCYDYKFDFEDDQHKI-P 1460 1470 1480 1490 1500 300 310 320 330 340 mKIAA1 CRCGSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMKCGFAF :.::. .::. mKIAA1 CHCGAVNCRKWMN 1510 1520 >>mKIAA1076 ( 855 res) mbh01320 (855 aa) initn: 208 init1: 91 opt: 240 Z-score: 268.3 bits: 59.4 E(): 8.5e-10 Smith-Waterman score: 240; 33.108% identity (37.984% ungapped) in 148 aa overlap (165-304:715-851) 140 150 160 170 180 190 mKIAA1 NMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTFVCE . .:.. ... ::. ... : .: : mKIAA1 ERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIE 690 700 710 720 730 740 200 210 220 230 240 mKIAA1 YVGELISDSEADVRE---ED-----SYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPN :::. : . ::.:: :: ::.: .:. ::: :: .::::: :.:: mKIAA1 YVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDT----IIDATKCGNFARFINHSCNPN 750 760 770 780 790 800 250 260 270 280 290 300 mKIAA1 LVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFSCRCGSSKCRHS . . : .:...: . :...:.. .:: . ::: . : ::: .:: mKIAA1 CYAKVITVESQK----KIVIYSKQHINVNEEITYDYKFPIEDVK---IPCLCGSENCRGT 810 820 830 840 850 310 320 330 340 mKIAA1 SAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMKCGFAF mKIAA1 LN >>mKIAA0339 ( 822 res) mph02448 (822 aa) initn: 188 init1: 90 opt: 230 Z-score: 257.2 bits: 57.3 E(): 3.5e-09 Smith-Waterman score: 230; 32.000% identity (36.641% ungapped) in 150 aa overlap (165-306:682-820) 140 150 160 170 180 190 mKIAA1 NMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTFVCE . .:.. :.. ::. ... : .: : mKIAA0 RSEQRRLLSAIGTSAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIE 660 670 680 690 700 710 200 210 220 230 240 mKIAA1 YVGELISDSEADVREE--------DSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPN :::. : . ::.::. .:::: .:. ::: ::..::::: : :: mKIAA0 YVGQNIRQMVADMREKRYVQEGIGSSYLFRVDHDT----IIDATKCGNLARFINHCCTPN 720 730 740 750 760 250 260 270 280 290 300 mKIAA1 LVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFDYGERFWDVKGKLFSCRCGSSKCRHS . . : .:...: . : . :.. .:: . : : . : ::. .:: : mKIAA0 CYAKVITIESQK----KIVIYSKQPIGVDEEITYDYKFPLEDNK---IPCLCGTESCRGS 770 780 790 800 810 820 310 320 330 340 mKIAA1 SAALAQRQASAAQEPQENGLPDTSSAAAADPPLILMKCGFAF mKIAA0 LN >>mKIAA1757 ( 1450 res) mbg10960 (1450 aa) initn: 98 init1: 98 opt: 169 Z-score: 186.4 bits: 45.0 E(): 3.1e-05 Smith-Waterman score: 169; 21.474% identity (23.759% ungapped) in 312 aa overlap (20-321:142-433) 10 20 30 40 mKIAA1 RDSDVTLKNKEGETPLQCASLSSQVWSA-LQMSKALRDSAPDKPVAVEK : ... :. :. : .: .. :... mKIAA1 LLNCDKCRGMSRGKVIRLHRRKQDNISGGDSSATESWDEELSPSTVLYTATQHTPTSITL 120 130 140 150 160 170 50 60 70 80 90 100 mKIAA1 TVSRDIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNIDRNITH-LQYCVCVDD :: : . .. : : : . : .: . .:.:.: :. . . . mKIAA1 TVRRTKPKKRKKSPEKGRAA------PKTKKI--KNSPSEAQNLDENTTEGWENRIRLWT 180 190 200 210 220 110 120 130 140 150 160 mKIAA1 CSSSTCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRAR . . .: : . .: . ... : :.. . : : :. . .. . mKIAA1 DQYEEAFTNQYSADVQNALEQHLHSNKEFVGKPAILDTINKTEL--ACNNTVIGSQMQLQ 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA1 L-QLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADV-----REEDSYLFDLDNKD : .. :.: .:. .:. : :.. :: :... .. .: .. ... .. . mKIAA1 LGRVTRVQKHRKILRAARDLALDTLIIEYRGKVMLRQQFEVNGHFFKKPYPFVLFYSKFN 290 300 310 320 330 340 230 240 250 260 270 280 mKIAA1 GEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLIQAGEQLGFD : .:.::: .:: .::: . : :: . :: ... ... : :. .: ..:: mKIAA1 GVEMCVDARTFGNDARFIRRSCTPN-AEVRHMIADGMIHLCIYAV-SAITKDAEVTIAFD 350 360 370 380 390 290 300 310 320 330 mKIAA1 YGERFWDVKGKLFSCRC--GSSKCRHSSAALAQRQASAAQEPQENGLPDTSSAAAADPPL : .. . . :. .: : :. .: . .:. .::. : mKIAA1 Y--EYSNCNYKV-DCACHKGNRNC-----PIQKRNPNAAELPLPPPPSFPTIGAETRRRK 400 410 420 430 440 450 340 mKIAA1 ILMKCGFAF mKIAA1 ARRKELELEQQNEVPEENPDPQPQEVPEKVTVSNEHEEVDNPEEKPEEEEKEEATDDQEN 460 470 480 490 500 510 348 residues in 1 query sequences 1768669 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:54:59 2006 done: Mon Mar 27 10:55:00 2006 Scan time: 0.540 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]