FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0035.ptfa, 703 aa vs ./tmplib.26680 library 1768314 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 17.3588+/-0.0118; mu= -44.6250+/- 0.775 mean_var=757.4246+/-186.503, 0's: 0 Z-trim: 8 B-trim: 103 in 1/35 Lambda= 0.0466 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0845 ( 1046 res) mbh00862 (1046) 337 38 0.0064 >>mKIAA0845 ( 1046 res) mbh00862 (1046 aa) initn: 588 init1: 179 opt: 337 Z-score: 144.8 bits: 37.9 E(): 0.0064 Smith-Waterman score: 536; 26.421% identity (30.153% ungapped) in 598 aa overlap (65-642:445-988) 40 50 60 70 80 mKIAA0 KATGATQQDANASSLLDIYSFWLNRSTKAPKVKLQSNGPVTKKAKKETSSSDS------- ::: . :..:..::: .. mKIAA0 EGEECRIGFGPSPFSLTEGLPKIPSISTHIKVKSEEMIKVVEKSEKETVIVEGQTEEIRV 420 430 440 450 460 470 90 100 110 120 130 140 mKIAA0 SEDSSEDEDKKAQGLPTQKAAAQVKRASVPQHAGKAAAKASESSSSEESSEEEEEDKKKK .: .:.:::.::: ..: .. .. : ::. : .::.. :.: :.. mKIAA0 TEGVTEEEDKEAQGQEGEEAEEGEEKE---EEEGAAAT----SPPAEEAASPEKETKSR- 480 490 500 510 520 150 160 170 180 190 200 mKIAA0 PVQQKAAKPQAKAVRPPAKKAESSESDSDSDSDSSSEEETPQTQKPKAAVAAKAQTKAEA :...: .: ..: : .:. : ... : .: ..: : . . . :. :. : mKIAA0 -VKEEAKSP-GEAKSP-------GEAKSPGEAKSPAEAKSPGEAKSPGEAKSPAEPKSPA 530 540 550 560 570 210 220 230 240 250 260 mKIAA0 KPGTPAKAQPKVANGKAAASSSSSSSSSSSDDSEEEKKAAAPPKKTVPKKQVVAKAPVKV .: .::.:. :..:. :. .: . ..: .... .: .: . : . ::.:..: mKIAA0 EPKSPAEAKSP-AEAKSPATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAE---AKSPAEV 580 590 600 610 620 630 270 280 290 300 310 320 mKIAA0 AAAPTQKSSSSEDSSSEEEEGQRQPMKKKAGPYSSVPPPSVPLPKKSPGTQAPKKAAAQT . : . .: .: .: : ..: . :. : . : : :::: .: . ::... mKIAA0 KS-PGEAKSPAEPKSPAEA---KSPAEVKS-PAEAKSPAEV----KSPG-EAKSPAAVKS 640 650 660 670 680 330 340 350 360 370 380 mKIAA0 QPADSSDDSSDDS--DSSSEEEKKPPAKTVVSKTPAKA-APVKKKAESSSDSSDSDSSED ::.... .. : ...: : : ::. .:.::.: .:.. :. .. . ...... mKIAA0 -PAEAKSPAAVKSPGEAKSPGEAKSPAE---AKSPAEAKSPIEVKSPEKAKTPVKEGAKS 690 700 710 720 730 390 400 410 420 430 440 mKIAA0 EAPAKPVSTTKSP-KPAVTPKPSAAKAVTTPKQPAGSNQKPQSRKADSSSSEEESSSSEE : :: .::: : . : :. ::. :.:. . :: . . . :... . mKIAA0 PAEAKSPEKAKSPVKEDIKP-PAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQ 740 750 760 770 780 790 450 460 470 480 490 500 mKIAA0 EEASKKSATTPKAKVTAKAAPAKQAPQAAGDSSSDSDSSSSEEEEKTPKPPAKKKAAGGA :::.. . : .: . : ..:. ..:.. . ..:: : :.:.. mKIAA0 EEAKHPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKKEEV----KSPVKEE----- 800 810 820 830 840 510 520 530 540 550 560 mKIAA0 VSTPAPGKKAEAESS--SSSSSSSEDSSEEEKKKKPKATTPKIQASKANGTPASLNGKAA :.. : ::.: :.. . .. ..:....: :. :: ::.. .: ::. . mKIAA0 VKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPK---PKVEEKKE--TPT----EKP 850 860 870 880 890 900 570 580 590 600 610 mKIAA0 KESEEEEEEEETEEKKKAAGTK---PGS-G-KKRKQNETADEATTPQAKKVKLETPN--T :.: : ..::. :::::.... :.. : :.. . . :.: .:. .: . :. : mKIAA0 KDSTAEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPSKPT 910 920 930 940 950 960 620 630 640 650 660 670 mKIAA0 FPKRKKGERRASSPFRRVREEEIEVDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSF .. : :. ..: .. .:: ..:: mKIAA0 ETEKPKKEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEPSKPKTEKAE 970 980 990 1000 1010 1020 703 residues in 1 query sequences 1768314 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:00 2006 done: Mon Mar 27 10:11:01 2006 Scan time: 0.890 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]