# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpj00429.fasta.nr -Q ../query/mKIAA4250.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4250, 239 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919800 sequences Expectation_n fit: rho(ln(x))= 4.8174+/-0.000186; mu= 10.8108+/- 0.011 mean_var=66.9051+/-13.096, 0's: 27 Z-trim: 34 B-trim: 1513 in 1/68 Lambda= 0.156800 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|50401090|sp|Q8VC57.1|KCTD5_MOUSE RecName: Full= ( 234) 1581 365.9 3.3e-99 gi|74150666|dbj|BAE25476.1| unnamed protein produc ( 234) 1577 365.0 6.1e-99 gi|149051987|gb|EDM03804.1| potassium channel tetr ( 234) 1555 360.0 1.9e-97 gi|73959457|ref|XP_547178.2| PREDICTED: similar to ( 234) 1534 355.2 5.2e-96 gi|148745326|gb|AAI42482.1| KCTD5 protein [Bos tau ( 234) 1518 351.6 6.3e-95 gi|50401182|sp|Q9NXV2.1|KCTD5_HUMAN RecName: Full= ( 234) 1516 351.2 8.7e-95 gi|194219331|ref|XP_001498378.2| PREDICTED: simila ( 234) 1432 332.2 4.6e-89 gi|126335351|ref|XP_001371853.1| PREDICTED: simila ( 316) 1375 319.4 4.4e-85 gi|50755761|ref|XP_414889.1| PREDICTED: hypothetic ( 231) 1360 315.9 3.6e-84 gi|223673963|pdb|3DRX|A Chain A, X-Ray Crystal Str ( 202) 1307 303.8 1.3e-80 gi|119605896|gb|EAW85490.1| potassium channel tetr ( 203) 1279 297.5 1.1e-78 gi|89273905|emb|CAJ82597.1| potassium channel tetr ( 216) 1241 288.9 4.4e-76 gi|50604158|gb|AAH77515.1| Kctd2-prov protein [Xen ( 216) 1239 288.5 6e-76 gi|42542883|gb|AAH66418.1| Zgc:77244 [Danio rerio] ( 224) 1237 288.0 8.4e-76 gi|50370190|gb|AAH76863.1| Kctd5-prov protein [Xen ( 216) 1231 286.7 2.1e-75 gi|112418868|gb|AAI22219.1| Zgc:153278 [Danio reri ( 267) 1152 268.9 5.9e-70 gi|53133804|emb|CAG32231.1| hypothetical protein [ ( 247) 1141 266.3 3.1e-69 gi|50403777|sp|Q14681.2|KCTD2_HUMAN RecName: Full= ( 263) 1110 259.4 4.2e-67 gi|182888365|gb|AAI60142.1| Potassium channel tetr ( 263) 1100 257.1 2e-66 gi|114670388|ref|XP_001138510.1| PREDICTED: potass ( 263) 1100 257.1 2e-66 gi|66364447|gb|AAH95988.1| Potassium channel tetra ( 263) 1097 256.4 3.2e-66 gi|194675697|ref|XP_001788934.1| PREDICTED: simila ( 367) 1097 256.5 4.2e-66 gi|73965046|ref|XP_852044.1| PREDICTED: similar to ( 444) 1097 256.6 4.8e-66 gi|23272394|gb|AAH33329.1| KCTD2 protein [Homo sap ( 245) 1087 254.1 1.5e-65 gi|53829372|ref|NP_899108.2| potassium channel tet ( 263) 1084 253.5 2.5e-65 gi|12847892|dbj|BAB27750.1| unnamed protein produc ( 164) 1073 250.8 9.8e-65 gi|109118144|ref|XP_001092438.1| PREDICTED: simila ( 263) 1073 251.0 1.4e-64 gi|115709863|ref|XP_782051.2| PREDICTED: similar t ( 234) 1052 246.2 3.4e-63 gi|148697731|gb|EDL29678.1| mCG13350, isoform CRA_ ( 220) 1048 245.3 6.1e-63 gi|113413550|ref|XP_001129849.1| PREDICTED: simila ( 225) 1048 245.3 6.2e-63 gi|149065998|gb|EDM15871.1| similar to hypothetica ( 220) 1046 244.8 8.4e-63 gi|157279213|gb|AAI34647.1| KCTD17 protein [Bos ta ( 208) 1043 244.1 1.3e-62 gi|114584331|ref|XP_001161448.1| PREDICTED: hypoth ( 225) 1043 244.1 1.4e-62 gi|123251597|emb|CAM22615.1| potassium channel tet ( 338) 1044 244.5 1.6e-62 gi|123251598|emb|CAM22616.1| potassium channel tet ( 277) 1040 243.5 2.6e-62 gi|210086364|gb|EEA34785.1| hypothetical protein B ( 226) 1035 242.3 4.8e-62 gi|126339844|ref|XP_001376276.1| PREDICTED: simila ( 498) 1036 242.8 7.5e-62 gi|118082765|ref|XP_416282.2| PREDICTED: similar t ( 220) 1016 238.0 9.3e-61 gi|148878208|gb|AAI45800.1| Kctd17 protein [Mus mu ( 218) 1008 236.2 3.2e-60 gi|114686284|ref|XP_515110.2| PREDICTED: similar t ( 247) 1008 236.3 3.5e-60 gi|119580542|gb|EAW60138.1| potassium channel tetr ( 254) 1008 236.3 3.6e-60 gi|10433672|dbj|BAB14007.1| unnamed protein produc ( 290) 1008 236.3 4e-60 gi|119580543|gb|EAW60139.1| potassium channel tetr ( 297) 1008 236.3 4.1e-60 gi|148697730|gb|EDL29677.1| mCG13350, isoform CRA_ ( 243) 1007 236.0 4.1e-60 gi|148697728|gb|EDL29675.1| mCG13350, isoform CRA_ ( 246) 1007 236.0 4.1e-60 gi|119580544|gb|EAW60140.1| potassium channel tetr ( 314) 1008 236.3 4.3e-60 gi|205371782|sp|Q8N5Z5.3|KCD17_HUMAN RecName: Full ( 321) 1008 236.3 4.3e-60 gi|148697729|gb|EDL29676.1| mCG13350, isoform CRA_ ( 296) 1007 236.1 4.8e-60 gi|149065995|gb|EDM15868.1| similar to hypothetica ( 246) 1005 235.6 5.7e-60 gi|109094074|ref|XP_001085432.1| PREDICTED: simila ( 247) 1005 235.6 5.7e-60 >>gi|50401090|sp|Q8VC57.1|KCTD5_MOUSE RecName: Full=BTB/ (234 aa) initn: 1581 init1: 1581 opt: 1581 Z-score: 1937.5 bits: 365.9 E(): 3.3e-99 Smith-Waterman score: 1581; 100.000% identity (100.000% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 MAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|74150666|dbj|BAE25476.1| unnamed protein product [M (234 aa) initn: 1577 init1: 1577 opt: 1577 Z-score: 1932.6 bits: 365.0 E(): 6.1e-99 Smith-Waterman score: 1577; 99.573% identity (100.000% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|741 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKISQMPVKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|149051987|gb|EDM03804.1| potassium channel tetramer (234 aa) initn: 1555 init1: 1555 opt: 1555 Z-score: 1905.7 bits: 360.0 E(): 1.9e-97 Smith-Waterman score: 1555; 97.863% identity (99.573% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF :::::::::::::::::::::::::::::::.:::::::.::::::::::::::: gi|149 MAENHCELLPPAPSGLGAGLGGGLCRRCSAGIGALAQRPSGVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|149 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINR 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM ::::::::::::::::::::::::::::::::. :::::::::::::::::::::::::: gi|149 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQMPVKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|73959457|ref|XP_547178.2| PREDICTED: similar to Pot (234 aa) initn: 1534 init1: 1534 opt: 1534 Z-score: 1880.1 bits: 355.2 E(): 5.2e-96 Smith-Waterman score: 1534; 96.154% identity (99.573% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF :::::::::::::.:::::::.:::::::::.::::::::::::::::::::::: gi|739 MAENHCELLPPAPGGLGAGLGAGLCRRCSAGLGALAQRPGGVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM ::::::::::::::::::::::::::::::::. ::.::::::::::::::::::::::: gi|739 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM :::::::::::::::::::.::::::::::::::::.::::.::::::::::::::::: gi|739 SDGWKFEQLVSIGSSYNYGSEDQAEFLCVVSKELHNSPYGTASEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|148745326|gb|AAI42482.1| KCTD5 protein [Bos taurus] (234 aa) initn: 1518 init1: 1518 opt: 1518 Z-score: 1860.5 bits: 351.6 E(): 6.3e-95 Smith-Waterman score: 1518; 94.872% identity (99.145% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF :::::::::::::.:::::::::::::::::.::::::::.:::::::::::::: gi|148 MAENHCELLPPAPGGLGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM ::::::::::::::::::::::::::::::::. ::.:.::::::::::::::::::::: gi|148 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPLKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM :::::::::::::::::::.::::::::::::::::.:.: .::::::::::::::::: gi|148 SDGWKFEQLVSIGSSYNYGSEDQAEFLCVVSKELHNSPHGPASEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|50401182|sp|Q9NXV2.1|KCTD5_HUMAN RecName: Full=BTB/ (234 aa) initn: 1516 init1: 1516 opt: 1516 Z-score: 1858.1 bits: 351.2 E(): 8.7e-95 Smith-Waterman score: 1516; 95.726% identity (98.718% similar) in 234 aa overlap (6-239:1-234) 10 20 30 40 50 60 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYF ::::::::: :: .:.:::::::::::::::.::::::::.:::::::::::::: gi|504 MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYF 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|504 LTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINK 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTM ::::::::::::::::::::::::::::::::. ::.::::::::::::::::::::::: gi|504 DLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTM 120 130 140 150 160 170 190 200 210 220 230 mKIAA4 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM :::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|504 SDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|194219331|ref|XP_001498378.2| PREDICTED: similar to (234 aa) initn: 1334 init1: 1334 opt: 1432 Z-score: 1755.4 bits: 332.2 E(): 4.6e-89 Smith-Waterman score: 1432; 92.340% identity (95.745% similar) in 235 aa overlap (6-239:1-234) 10 20 30 40 50 mKIAA4 GLVRIMAENHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQR-PGGVSKWVRLNVGGTY ::::::::. :: .:::::::::::: :.: : :. ::.::::::::::::: gi|194 MAENHCELVAPA-RALGAGLGGGLCRRYSGGSGNLGTSDPGSVSKWVRLNVGGTY 10 20 30 40 50 60 70 80 90 100 110 mKIAA4 FLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVIN 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA4 KDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVST :::::::::::::::::::::::::::::::::: ::.:::::::::::::::::::::: gi|194 KDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRTSQVPVKHVYRVLQCQEEELTQMVST 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA4 MSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM ::::::::::::::::::::.::::::::::::::::.:::::::::::::::::::::: gi|194 MSDGWKFEQLVSIGSSYNYGSEDQAEFLCVVSKELHNSPYGTTSEPSEKAKILQERGSRM 180 190 200 210 220 230 >>gi|126335351|ref|XP_001371853.1| PREDICTED: similar to (316 aa) initn: 1366 init1: 1204 opt: 1375 Z-score: 1683.9 bits: 319.4 E(): 4.4e-85 Smith-Waterman score: 1375; 90.749% identity (96.035% similar) in 227 aa overlap (6-230:1-227) 10 20 30 40 50 mKIAA4 GLVRIMAENHCELLP-PAPSGLGAGLGGGLCRRCSAGMGALAQRP-GGVSKWVRLNVGGT :::::::::: :. ..::.: ::::::::..:.. :..: :: ::::::::::: gi|126 MAENHCELLPAPGATALGVGPGGGLCRRCGSGLAPLGERATGGGSKWVRLNVGGT 10 20 30 40 50 60 70 80 90 100 110 mKIAA4 YFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA4 NKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVS ::::::::::::::::::::::::::::::::::. ::.::::::::::::::::::::: gi|126 NKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVS 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA4 TMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSR ::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|126 TMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTSYGTTSEPSEKAKNCDQGALL 180 190 200 210 220 230 mKIAA4 M gi|126 PCVYKCWCMLMLLLTLQLCPRTAAWFWLSYPPTPPHACPNLWLRVPEAFAATSFAPKAGC 240 250 260 270 280 290 >>gi|50755761|ref|XP_414889.1| PREDICTED: hypothetical p (231 aa) initn: 1343 init1: 1246 opt: 1360 Z-score: 1667.4 bits: 315.9 E(): 3.6e-84 Smith-Waterman score: 1360; 88.608% identity (92.827% similar) in 237 aa overlap (5-239:1-231) 10 20 30 40 50 mKIAA4 GLVRIMAENHCELLPPAP-SGLGAGLGGGLCRRCSAGMGALAQRPGGV-SKWVRLNVGGT . :::::.. : :: .::: : :: :::::. : ::.: .:::::::::: gi|507 MAAENHCDF-PVAPIGGLGLGGPGGPCRRCSS-----APPPGAVPGKWVRLNVGGT 10 20 30 40 50 60 70 80 90 100 110 mKIAA4 YFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|507 CFLTTRQTLCRDPKSFLFRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA4 NKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVS ::::::::::::::::::::::::::::::::::.:::.::::::::::::::::::::: gi|507 NKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKISQVPVKHVYRVLQCQEEELTQMVS 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA4 TMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|507 TMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSR 180 190 200 210 220 230 mKIAA4 M : gi|507 M >>gi|223673963|pdb|3DRX|A Chain A, X-Ray Crystal Structu (202 aa) initn: 1307 init1: 1307 opt: 1307 Z-score: 1603.4 bits: 303.8 E(): 1.3e-80 Smith-Waterman score: 1307; 97.512% identity (99.502% similar) in 201 aa overlap (39-239:2-202) 10 20 30 40 50 60 mKIAA4 NHCELLPPAPSGLGAGLGGGLCRRCSAGMGALAQRPGGVSKWVRLNVGGTYFLTTRQTLC :::::::.:::::::::::::::::::::: gi|223 SALAQRPGSVSKWVRLNVGGTYFLTTRQTLC 10 20 30 70 80 90 100 110 120 mKIAA4 RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 RDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 EEAEFYNITSLIKLVKDKIRERDSRISQMPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQ ::::::::::::::::::::::::. ::.::::::::::::::::::::::::::::::: gi|223 EEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQ 100 110 120 130 140 150 190 200 210 220 230 mKIAA4 LVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTTSEPSEKAKILQERGSRM :::::::::::::::::::::::::::::::::.::::::::::::::::: gi|223 LVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM 160 170 180 190 200 239 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 08:03:33 2009 done: Wed Mar 18 08:08:42 2009 Total Scan time: 725.240 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]