FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1899.ptfa, 828 aa vs ./tmplib.26680 library 1768189 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.5557+/-0.00399; mu= 17.2613+/- 0.267 mean_var=79.4972+/-18.923, 0's: 0 Z-trim: 4 B-trim: 41 in 1/35 Lambda= 0.1438 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0357 ( 1471 res) mbg05391 (1471) 161 44 0.00015 mKIAA0209 ( 1567 res) mth00856 (1567) 138 39 0.0043 >>mKIAA0357 ( 1471 res) mbg05391 (1471 aa) initn: 290 init1: 161 opt: 161 Z-score: 173.9 bits: 44.0 E(): 0.00015 Smith-Waterman score: 280; 24.852% identity (27.815% ungapped) in 338 aa overlap (419-747:89-399) 390 400 410 420 430 440 mKIAA1 RDAERKSLYTLFLESIQLRLQHGEDSAPHIVNEDQTTKENLIKMQSIAERHLELDDIHDP :. :. ... .:. . .:. . mKIAA0 HPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRLWHDKYTLRKSMIPSFITMDQSRKV 60 70 80 90 100 110 450 460 470 480 490 500 mKIAA1 LL---AINFARLYLEQSDFHEKFAGGDICVDRSSESVT-CQTFELTLRSCLYPHIDKQYL :: .::: :.: . . : : .:.:: . :.. . .:: :. mKIAA0 LLIGKSINF----LHQVCHDQTPTTKMIAVTKSAESPRDAADLFTDLENAFQGKIDAAYF 120 130 140 150 160 170 510 520 530 540 550 560 mKIAA1 HCCGNLMQTLKRDFRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDK-IREKET--WQNVS- . :...:.. . :.:..:::: ..:. :: . .. . . .: : .:.. mKIAA0 ETSKYLLDVLNKKYSLLEHMQAMRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTG 180 190 200 210 220 230 570 580 590 600 610 mKIAA1 FLNVQLQEAVGQ-RYPEDSLRLSISFENVDTTKKKLPVHILDGLTLSYKVPWPVDIVISV .:.. .. . .: :: ::.. . .:. : :: :.: :. :.. mKIAA0 ILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLD-----YHVDGPIATVFTR 240 250 260 270 280 620 630 640 650 660 670 mKIAA1 ECQKIYNQVFLLLLQIKWAKYSLDVLLFGELGNAAERSQAKEDIPRDQDTPSQFGPPKES ::.. : .:: .: . : .: : . :.. :: . ...: .:. mKIAA0 ECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNA----KLLRNMP-------EFSGV--- 290 300 310 320 330 680 690 700 710 720 730 mKIAA1 LRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLS .:. .: ...::..... :: ..:. . :. ..:..:.:::..: : .:. mKIAA0 ----LHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDHIIAAHEAFLN 340 350 360 370 380 390 740 750 760 770 780 790 mKIAA1 TIHDRCLLREKVSFVKEAIMKVLNLALMFAEGWQAGLGAWQMESIEKMESDFKNCHMFLV :: .:::: mKIAA0 TITSRCLLDSNSRVLLNQLRAVFDQIIELQNAQDVMYRAALEELQRRLQFEEKKKQREIE 400 410 420 430 440 450 >>mKIAA0209 ( 1567 res) mth00856 (1567 aa) initn: 61 init1: 61 opt: 138 Z-score: 147.8 bits: 39.2 E(): 0.0043 Smith-Waterman score: 141; 20.528% identity (23.256% ungapped) in 341 aa overlap (416-733:567-890) 390 400 410 420 430 440 mKIAA1 AAARDAERKSLYTLFLESIQLRLQHGEDSAPHIVNEDQTTKENLIKMQSIAERHLELDDI : ...... . : : .:: .. : :: mKIAA0 YIPSVLHDVETVFDAKLLSQLLYEFYTCIPPVKLQKQKVQSMNEI-VQSNLFKKQECRDI 540 550 560 570 580 590 450 460 470 480 490 500 mKIAA1 HDPLLAINFARLYLEQSDFHEKFAGGDICVDRSS---ESVTCQTFELTLRSCLYPHIDK- :... .. .: ::: : .. : ::. . : ..:: .: : ::.. mKIAA0 LLPVITKELKEL-LEQRDDGQHQAEKKHCVELLNSILEVLSCQDAAFT-----YDHIQEI 600 610 620 630 640 510 520 530 540 550 mKIAA1 --QYLHCCGNLMQTLKRDFRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNV : :. . . :. :: :. .. : . .: . :: :.:: :. . . mKIAA0 MVQLLRTVNRTVITMGRDHALISHFVACMTAILDQMGDQHYSFYIETFQTSSDLVDFLME 650 660 670 680 690 700 560 570 580 590 600 610 mKIAA1 SFLNVQLQEAVGQR-YPEDSLRLS-----ISFENVDTTKKKLPVHILDGLTLSYKVPWPV .: ..... .:. :: : . .: . .. .. . . ..:. .. ... : mKIAA0 TF--IMFKDLIGKNVYPGDWMAMSMVQNRVFLRAINKFAETMNQKFLEHTSFEFQL-WNN 710 720 730 740 750 760 620 630 640 650 660 mKIAA1 DIVISVECQKIYNQVFLLLLQIKWAKYSLDVLLFGEL----GNAAERSQAKEDIPRDQDT . ..: . .: : : :. :::. . .:.. : . . : . mKIAA0 YFHLAVA---FITQDSLQLEQFTHAKYNKILNKYGDMRRLIGFSIRDMWYKLGQNKICFI 770 780 790 800 810 820 670 680 690 700 710 720 mKIAA1 PSQFGP-------PKESLRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVE :.. :: :. ::. .:. : . . .. . .. . :...:.:: mKIAA0 PGMVGPILEMTLIPEAELRKATIPIFFD----MMLCEYQRTGAFKKFENEIILKLDHEVE 830 840 850 860 870 730 740 750 760 770 780 mKIAA1 EAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFAEGWQAGLGAWQME .. .: ... mKIAA0 GGRGDEQYMQLLESILMECTAEHPTIAKSVENFVSLVKGLLEKLLDYRGVMTDESKDNRM 880 890 900 910 920 930 828 residues in 1 query sequences 1768189 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:55:30 2006 done: Mon Mar 27 10:55:31 2006 Scan time: 0.910 Display time: 0.100 Function used was FASTA [version 3.4t11 Apr 17, 2002]