# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph02465.fasta.nr -Q ../query/mKIAA3007.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA3007, 734 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921100 sequences Expectation_n fit: rho(ln(x))= 5.0555+/-0.000185; mu= 13.5466+/- 0.010 mean_var=70.1866+/-13.832, 0's: 37 Z-trim: 38 B-trim: 1433 in 1/66 Lambda= 0.153090 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148703399|gb|EDL35346.1| mCG13096, isoform CRA_ ( 758) 4870 1085.1 0 gi|26335037|dbj|BAC31219.1| unnamed protein produc ( 756) 4859 1082.7 0 gi|166232935|sp|Q8BQM9.2|MD12L_MOUSE RecName: Full (2157) 3910 873.4 0 gi|15825159|gb|AAL09579.1| NOPAR [Homo sapiens] ( 721) 3778 843.9 0 gi|166232934|sp|Q86YW9.2|MD12L_HUMAN RecName: Full (2145) 3778 844.3 0 gi|119599207|gb|EAW78801.1| mediator of RNA polyme (2151) 3778 844.3 0 gi|114589861|ref|XP_516821.2| PREDICTED: mediator (2145) 3775 843.6 0 gi|28301676|gb|AAO38813.1|AF399708_1 TRALPUSH [Hom (2145) 3770 842.5 0 gi|194221724|ref|XP_001917763.1| PREDICTED: mediat (2115) 3689 824.6 0 gi|109048695|ref|XP_001107022.1| PREDICTED: simila (2145) 3537 791.1 0 gi|148703398|gb|EDL35345.1| mCG13096, isoform CRA_ ( 780) 3512 785.2 0 gi|26338946|dbj|BAC33144.1| unnamed protein produc ( 787) 3512 785.2 0 gi|126338216|ref|XP_001370395.1| PREDICTED: simila (2156) 3509 784.9 0 gi|149064705|gb|EDM14856.1| rCG49991 [Rattus norve ( 774) 3485 779.2 0 gi|15825161|gb|AAL09580.1| NOPAR2 [Homo sapiens] ( 756) 3416 764.0 0 gi|118095405|ref|XP_001235039.1| PREDICTED: simila ( 883) 3036 680.1 9.5e-193 gi|74007591|ref|XP_857116.1| PREDICTED: similar to (2194) 2926 656.1 3.9e-185 gi|109464900|ref|XP_001075506.1| PREDICTED: simila ( 482) 2408 541.2 3.4e-151 gi|123895899|sp|Q2QCI8.1|MED12_DANRE RecName: Full (2173) 2313 520.7 2.2e-144 gi|74007593|ref|XP_857160.1| PREDICTED: similar to (2157) 2306 519.2 6.5e-144 gi|109131139|ref|XP_001088218.1| PREDICTED: mediat (2143) 2295 516.7 3.5e-143 gi|47226182|emb|CAG08329.1| unnamed protein produc (2206) 2278 513.0 4.8e-142 gi|224098681|ref|XP_002191013.1| PREDICTED: aldehy (2174) 2261 509.2 6.4e-141 gi|123226657|emb|CAM24447.1| mediator of RNA polym (2157) 2214 498.9 8.5e-138 gi|34849874|gb|AAH57119.1| Med12 protein [Mus musc (2158) 2214 498.9 8.5e-138 gi|123226656|emb|CAM24446.1| mediator of RNA polym (2169) 2214 498.9 8.5e-138 gi|123226658|emb|CAM24448.1| mediator of RNA polym (2182) 2214 498.9 8.6e-138 gi|166233814|sp|A2AGH6.1|MED12_MOUSE RecName: Full (2190) 2214 498.9 8.6e-138 gi|148682203|gb|EDL14150.1| mediator of RNA polyme (2218) 2214 498.9 8.7e-138 gi|3426322|gb|AAC83164.1| OPA-containing protein 1 (2074) 2212 498.4 1.1e-137 gi|74007587|ref|XP_848775.1| PREDICTED: similar to (2179) 2211 498.2 1.4e-137 gi|74007595|ref|XP_857204.1| PREDICTED: similar to (2184) 2211 498.2 1.4e-137 gi|74007597|ref|XP_538072.2| PREDICTED: similar to (2186) 2211 498.2 1.4e-137 gi|126342761|ref|XP_001367769.1| PREDICTED: simila (1128) 2207 497.1 1.5e-137 gi|119625722|gb|EAX05317.1| mediator of RNA polyme (1692) 2206 497.0 2.4e-137 gi|194228008|ref|XP_001915364.1| PREDICTED: mediat (2164) 2206 497.1 2.9e-137 gi|119625720|gb|EAX05315.1| mediator of RNA polyme (2176) 2206 497.1 2.9e-137 gi|209572775|sp|Q93074.4|MED12_HUMAN RecName: Full (2177) 2206 497.1 2.9e-137 gi|166233817|sp|Q5RCU2.2|MED12_PONPY RecName: Full (2181) 2206 497.1 2.9e-137 gi|119625721|gb|EAX05316.1| mediator of RNA polyme (2183) 2206 497.1 2.9e-137 gi|4530439|gb|AAD22033.1| thyroid hormone receptor (2212) 2206 497.1 2.9e-137 gi|109131137|ref|XP_001088325.1| PREDICTED: mediat (2170) 2205 496.9 3.4e-137 gi|109131135|ref|XP_001088424.1| PREDICTED: mediat (2180) 2205 496.9 3.4e-137 gi|149042194|gb|EDL95901.1| rCG36294, isoform CRA_ (1815) 2200 495.7 6.3e-137 gi|109510916|ref|XP_001054608.1| PREDICTED: simila (2169) 2200 495.8 7.3e-137 gi|109510918|ref|XP_001054666.1| PREDICTED: simila (2190) 2200 495.8 7.3e-137 gi|55727318|emb|CAH90415.1| hypothetical protein [ (1769) 2197 495.0 9.8e-137 gi|194380096|dbj|BAG63815.1| unnamed protein produ (2000) 2195 494.6 1.5e-136 gi|194680283|ref|XP_599229.4| PREDICTED: similar t (2180) 2194 494.4 1.8e-136 gi|194044988|ref|XP_001927883.1| PREDICTED: mediat (2182) 2161 487.2 2.9e-134 >>gi|148703399|gb|EDL35346.1| mCG13096, isoform CRA_b [M (758 aa) initn: 4870 init1: 4870 opt: 4870 Z-score: 5806.8 bits: 1085.1 E(): 0 Smith-Waterman score: 4870; 100.000% identity (100.000% similar) in 728 aa overlap (1-728:1-728) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 60 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 70 80 90 100 110 120 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 130 140 150 160 170 180 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM 190 200 210 220 230 240 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS 250 260 270 280 290 300 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA 310 320 330 340 350 360 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL 370 380 390 400 410 420 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 430 440 450 460 470 480 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 490 500 510 520 530 540 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP 550 560 570 580 590 600 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY 610 620 630 640 650 660 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY 670 680 690 700 710 720 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|148 ATHFPIPLVRHVSISVYHDDFIRPSVIGCQIIHSLCLL 730 740 750 >>gi|26335037|dbj|BAC31219.1| unnamed protein product [M (756 aa) initn: 4859 init1: 4859 opt: 4859 Z-score: 5793.7 bits: 1082.7 E(): 0 Smith-Waterman score: 4859; 100.000% identity (100.000% similar) in 726 aa overlap (3-728:1-726) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY 660 670 680 690 700 710 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|263 ATHFPIPLVRHVSISVYHDDFIRPSVIGCQIIHSLCLL 720 730 740 750 >>gi|166232935|sp|Q8BQM9.2|MD12L_MOUSE RecName: Full=Med (2157 aa) initn: 3909 init1: 3909 opt: 3910 Z-score: 4654.6 bits: 873.4 E(): 0 Smith-Waterman score: 4755; 98.485% identity (98.485% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY :::::::::::::: ::::::::::::::::::::::::::::::::::: gi|166 DLAGNKPLAILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|166 ATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKGTTESGVGD 710 720 730 740 750 760 >>gi|15825159|gb|AAL09579.1| NOPAR [Homo sapiens] (721 aa) initn: 3778 init1: 3778 opt: 3778 Z-score: 4503.7 bits: 843.9 E(): 0 Smith-Waterman score: 4620; 95.179% identity (97.383% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: ::::::::::::::::::::::::::::::::::: gi|158 DLAGNKPLSILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|158 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|158 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|158 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|158 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::: gi|158 VAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::.:::.:::: gi|158 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPVGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.:::::::::::::::::::::: gi|158 SKDHDVKMEIFSPMPGESCENANTSLGRRMSVNCEKLVKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|158 ATHFPIPLVSHCFS 710 720 >>gi|166232934|sp|Q86YW9.2|MD12L_HUMAN RecName: Full=Med (2145 aa) initn: 3778 init1: 3778 opt: 3778 Z-score: 4497.1 bits: 844.3 E(): 0 Smith-Waterman score: 4620; 95.179% identity (97.383% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: ::::::::::::::::::::::::::::::::::: gi|166 DLAGNKPLSILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|166 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|166 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|166 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|166 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::: gi|166 VAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::.:::.:::: gi|166 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPVGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.:::::::::::::::::::::: gi|166 SKDHDVKMEIFSPMPGESCENANTSLGRRMSVNCEKLVKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|166 ATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTTETGVGD 710 720 730 740 750 760 >>gi|119599207|gb|EAW78801.1| mediator of RNA polymerase (2151 aa) initn: 3778 init1: 3778 opt: 3778 Z-score: 4497.1 bits: 844.3 E(): 0 Smith-Waterman score: 4620; 95.179% identity (97.383% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: ::::::::::::::::::::::::::::::::::: gi|119 DLAGNKPLSILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|119 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|119 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|119 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|119 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::: gi|119 VAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::.:::.:::: gi|119 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPVGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.:::::::::::::::::::::: gi|119 SKDHDVKMEIFSPMPGESCENANTSLGRRMSVNCEKLVKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|119 ATHFPIPLVSHCFSDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTT 710 720 730 740 750 760 >>gi|114589861|ref|XP_516821.2| PREDICTED: mediator of R (2145 aa) initn: 3775 init1: 3775 opt: 3775 Z-score: 4493.5 bits: 843.6 E(): 0 Smith-Waterman score: 4617; 95.041% identity (97.383% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: ::::::::::::::::::::::::::::::::::: gi|114 DLAGNKPLSILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|114 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|114 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|114 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|114 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP ::::::::::::::::::::::::::::.::.:::::::::::::::::::::::.:::: gi|114 VAKLLEKRQAEIEAERCGESEVLDEKESVSSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::.:::.:::: gi|114 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPVGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.:::::::::::::::::::::: gi|114 SKDHDVKMEIFSPMPGESCENANTSLGRRVSVNCEKLVKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|114 ATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTTETGVGD 710 720 730 740 750 760 >>gi|28301676|gb|AAO38813.1|AF399708_1 TRALPUSH [Homo sa (2145 aa) initn: 3770 init1: 3770 opt: 3770 Z-score: 4487.6 bits: 842.5 E(): 0 Smith-Waterman score: 4612; 95.041% identity (97.245% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: ::::::::::::::::::::::::::::::::::: gi|283 DLAGNKPLSILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|283 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|283 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|283 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|283 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::: gi|283 VAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::.:::.:::: gi|283 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPVGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.::::: :::::::::::::::: gi|283 SKDHDVKMEIFSPMPGESCENANTSLGRRMSVNCEKLVKREKPXELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|283 ATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTTETGVGD 710 720 730 740 750 760 >>gi|194221724|ref|XP_001917763.1| PREDICTED: mediator c (2115 aa) initn: 3204 init1: 2571 opt: 3689 Z-score: 4391.0 bits: 824.6 E(): 0 Smith-Waterman score: 4299; 93.074% identity (97.114% similar) in 693 aa overlap (36-728:6-686) 10 20 30 40 50 60 mKIAA3 FGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSARNIV :::::::::::::::::::::::::::::: gi|194 MGGSWDELTAVNVKQGFNNQPAFTGDEHGSARNIV 10 20 30 70 80 90 100 110 120 mKIAA3 INPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDLAGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 INPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDLAGN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA3 KPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYYSAISE ::::::::: :::::::::::::::::::::::::::::::::::::::: gi|194 KPLAILAKK-----------VPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYYSAISE 100 110 120 130 140 190 200 210 220 230 240 mKIAA3 AKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAMKQWEY :::::::: ::::::::::::::::::.:::::::.:::.:.:::::::.:::::::::: gi|194 AKIKKRQATDPNLEWTQISTRYLREQLAKISDFYHVASSAGEGPVPVPPDVEQAMKQWEY 150 160 170 180 190 200 250 260 270 280 290 300 mKIAA3 NEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQSAYLSR :::::::.::::::::::::::::::::::::.::.:::::::::::::::::::::::: gi|194 NEKLAFHLFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAYLSR 210 220 230 240 250 260 310 320 330 340 350 360 mKIAA3 RLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLAFSDFL ::::::::::.:::::::.: :::::::.:: ...:::.::::.:::::::::::::::: gi|194 RLAYFCARRLALLLSDSPSL-AAHSPHMMIGPSSSSIGAPSPGAPGPGMSPVQLAFSDFL 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA3 SCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSLPMPGG ::::::::::::::::::::::::::::::::::..: .::::::::::::::::::::: gi|194 SCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNDSKSANPGSPLDLLQVAPSSLPMPGG 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA3 NTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRHCFD 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA3 RTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 RTDSSNSMETLYHKIFWAHQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMAVAKLL 450 460 470 480 490 500 550 560 570 580 590 600 mKIAA3 EKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDPNSECE ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: : gi|194 EKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNSEYE 510 520 530 540 550 560 610 620 630 640 650 660 mKIAA3 KVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHYSKDHD ::::::::::::::::::::::::::::::::::::::::: :::::.:.:::: :::: gi|194 KVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTQPRSPAGDNADEHYPKDHD 570 580 590 600 610 620 670 680 690 700 710 720 mKIAA3 MKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQYATHFP .::::::::::::::: .:::.::.:.::::::::::::::::::::::::::::::::: gi|194 VKMEIFSPMPGESCENASPSLGRRMSLNGEKLLKREKPRELIFPSNYDLLRHLQYATHFP 630 640 650 660 670 680 730 mKIAA3 IPLGILAMW ::: gi|194 IPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSSTETGVGDEGQKA 690 700 710 720 730 740 >>gi|109048695|ref|XP_001107022.1| PREDICTED: similar to (2145 aa) initn: 4393 init1: 3531 opt: 3537 Z-score: 4209.4 bits: 791.1 E(): 0 Smith-Waterman score: 4372; 90.496% identity (94.904% similar) in 726 aa overlap (3-728:1-715) 10 20 30 40 50 60 mKIAA3 EIMAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGS 10 20 30 40 50 70 80 90 100 110 120 mKIAA3 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ARNIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA3 DLAGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYY ::::::::.::::: :.. . .: :. ::: .::.: :::: : . gi|109 DLAGNKPLSILAKKV-----SNISYI-VL-----VMLPLAKSGVPQVSPDWLIKCTNLIF 120 130 140 150 160 190 200 210 220 230 240 mKIAA3 SAISEAKIKKRQAPDPNLEWTQISTRYLREQLVKISDFYHMASSTGDGPVPVPPEVEQAM .: :..:... .:.:.:::::::::::::.::::::::::::::::::::::::::: gi|109 VCSGEFKLQKKESSEPSLKWTQISTRYLREQLAKISDFYHMASSTGDGPVPVPPEVEQAM 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA3 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPVDDSLLKLLLPLMLQYSDEFVQS :::::::::::::::::::::::::::::::::::::.::.::::::::::::::::::: gi|109 KQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQS 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA3 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMIIGTNNTSIGTPSPGTPGPGMSPVQLA :::::::::::::::::::::::::::::::::.:: ::.:::.:::: ::::::::::: gi|109 AYLSRRLAYFCARRLSLLLSDSPNLLAAHSPHMMIGPNNSSIGAPSPGPPGPGMSPVQLA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA3 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKISNPGSPLDLLQVAPSSL :::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::: gi|109 FSDFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNENKSANPGSPLDLLQVAPSSL 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA3 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PMPGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLD 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA3 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RHCFDRTDSSNSMETLYHKIFWANQNKDNQEVAPNDEAVVTLLCEWAVSCKRSGKHRAMA 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA3 VAKLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPALSDP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::: gi|109 VAKLLEKRQAEIEAERCGESEVLDEKESISSSSLAGSSLPVFQNVLLRFLDTQAPSLSDP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA3 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTGLRSPAGENSDEHY :::::::::::::::::::::::::::::::::::::::::::::: :::::::.:::: gi|109 NSECEKVEFVNLVLLFCEFIRHDVFSHDAYMCTLISRGDLSVTASTRPRSPAGENADEHY 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA3 SKDHDMKMEIFSPMPGESCENINPSLSRRLSVNGEKLLKREKPRELIFPSNYDLLRHLQY :::::.::::::::::::::: : ::.::.::: :::.:::::::::::::::::::::: gi|109 SKDHDVKMEIFSPMPGESCENANTSLGRRMSVNCEKLVKREKPRELIFPSNYDLLRHLQY 650 660 670 680 690 700 730 mKIAA3 ATHFPIPLGILAMW :::::::: gi|109 ATHFPIPLDESSSHECNQRTILLYGVGKERDEARHQLKKITKDILKILNKKSTTETGVGD 710 720 730 740 750 760 734 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 22:12:30 2009 done: Mon Mar 16 22:20:38 2009 Total Scan time: 1075.260 Total Display time: 0.440 Function used was FASTA [version 34.26.5 April 26, 2007]