FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00236.ptfa, 701 aa vs ./tmplib.26680 library 1768316 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 9.2618+/-0.00632; mu= -2.6167+/- 0.414 mean_var=329.2818+/-81.700, 0's: 0 Z-trim: 6 B-trim: 0 in 0/36 Lambda= 0.0707 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1568 ( 792 res) mbg15046 ( 792) 404 55 3.2e-08 >>mKIAA1568 ( 792 res) mbg15046 (792 aa) initn: 377 init1: 149 opt: 404 Z-score: 240.0 bits: 55.1 E(): 3.2e-08 Smith-Waterman score: 492; 25.605% identity (30.100% ungapped) in 703 aa overlap (3-680:21-643) 10 20 30 40 mFLJ00 GLQSAKLGGLHWGQDYEFKVRPSSGRARGPDSNVLLLRLPEQ .:: : .:. : ::.:::: .. .: ::. .: :. mKIAA1 TSGLQASTVWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 10 20 30 40 50 60 50 60 70 80 90 mFLJ00 VPSAPPQGVT-LRSGNG---SVFVSWAPPPAESHNGVIRGYQVWSLGNASLPAANWTVVG .::::::.:: : :. :. ::: ::::. .::.:. :..: ::: . : :: . mKIAA1 APSAPPQSVTVLTVGSHNSTSISVSWDPPPADHQNGIIQEYKIWCLGNETRFHINKTVDA 70 80 90 100 110 120 100 110 120 130 140 150 mFLJ00 EQTQLEIATRLPG-SYCVQVAAVTGAGAGELSTPVCLLLEQAMEQSARDPRKHVPWTLEQ .. :. .:: .: :.::: :.::.: : : ... : . . . :: mKIAA1 AIRSVVIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSIT---EQ 130 140 150 160 170 160 170 180 190 200 210 mFLJ00 LRATLRRPEVIASSAVLLWLLLLGITVCIYRRRKAGVHLGPGLYRYTSEDAILKHR---- . ....: ::. . :..:.:... .: ::: :. . :. : mKIAA1 ITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRP 180 190 200 210 220 230 220 230 240 250 260 mFLJ00 --MDHSDS--PWLADTWRSTSGSRDLSSSSSLSSRLGLDPRDPLEGRRSLISWDPRSPGV .. .: :::::.: .:: ...:.: ...: :: ... : : mKIAA1 GLLNAGDPNYPWLADSWPATS--LPVNNSNSGPNEIGN------FGRGDVL------PPV 240 250 260 270 280 270 280 290 300 310 320 mFLJ00 PLLPDTSTFYGSLIAEQPSSPPVRPSPKTPAARRFPSKLAGTSSPWASSDSLCSRRGLCS : : .. ..... . . :: :. ..:.:... : : .. mKIAA1 PGQGDKTA---TMLSDGAIYSSIDFTTKTTYNS---SSQITQATPYATTQILHSN-SIHE 290 300 310 320 330 330 340 350 360 370 380 mFLJ00 PRMSLTPTEAWKAKKKQELHQANSSPLLRGSHPMEIWAWELGSRASKNLSQSPGEAPRAV ..: : ::.. .:. : : ... : .. . : . . :. .. mKIAA1 LAVDL-PDPQWKSSVQQKTD-------LMG------FGYSLPDQNKGNNGGKGGKKKKTK 340 350 360 370 380 390 400 410 420 430 440 mFLJ00 VSWRAVGPQLHRNSSELASRPLPPTPLSLRGASSHDPQSQCVEKLQAPSSDPLPAAPLSV : .: . :.: :. :::: :.. :::.. :. mKIAA1 NSSKA----QKNNGSTWANVPLPPPPVQ-----------------------PLPGTELGH 390 400 410 450 460 470 480 490 500 mFLJ00 LNSSRPSSPQASFLSCPSPSSSNLSSSSLSSLEEEEDQDSVLTP--EEVALCLELSDGEE . . .. ... : : .. : .. . :::.::. : :: . :: .: :.. mKIAA1 YAAEQENGYDSDSWCPPLPVQTYLHQGMEDELEEDEDR--VPTPPVRGVASSPAISFGQQ 420 430 440 450 460 470 510 520 530 540 550 560 mFLJ00 TPTNSVSPMPRAPSPPTTYGYISIPTCSGLADMGRAGGGVGSEVGNLLYPPRPCPTPTPS . : ...: :: : .... : . :... . :.. ::.: :.: mKIAA1 S-TATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNTP----PPQP---PAPP 480 490 500 510 520 570 580 590 600 610 620 mFLJ00 EGSLANGWGSASEDNVPSARASLVSSSDGSFLADTHFARALAVAVDSFGLSLDPREADCV : .... : : .::. :. .. : . ::: . : .:: . . mKIAA1 LGYVSGALISDLETDVPDEDAD----DEEEPLEIPRPLRALDQTPGSSMDNLDSSVTGKA 530 540 550 560 570 580 630 640 650 660 670 mFLJ00 FTDA-----SSPPSPRGDLSLTRSFSL---PLWEWRPDWLEDAEISHTQRLG--RGLPPW :... .:: : .. : ... : : . . .. . .: : ::: mKIAA1 FSSSQRQRPTSPFSTDSNTSAAQNQSQRPRPTKKHKGGRMDPQPVLPHRREGMPDDLPP- 590 600 610 620 630 640 680 690 700 mFLJ00 PPDSRASSQRSWLTGAVPKAGDSS ::: mKIAA1 PPDPPPGQGLRQQIGLSQHSGNVENSTERKGSSLERQQAANLEDTKSSLDCPAKTVLEWQ 650 660 670 680 690 700 701 residues in 1 query sequences 1768316 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:25 2006 done: Mon Mar 27 10:08:26 2006 Scan time: 0.880 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]