FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1573.ptfa, 857 aa vs ./tmplib.26680 library 1768160 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.3048+/-0.00392; mu= 17.8768+/- 0.263 mean_var=74.2248+/-17.127, 0's: 0 Z-trim: 2 B-trim: 0 in 0/36 Lambda= 0.1489 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0558 ( 1098 res) mbg01462 (1098) 142 41 0.001 >>mKIAA0558 ( 1098 res) mbg01462 (1098 aa) initn: 147 init1: 123 opt: 142 Z-score: 159.1 bits: 40.9 E(): 0.001 Smith-Waterman score: 411; 22.376% identity (26.256% ungapped) in 724 aa overlap (49-733:96-751) 20 30 40 50 60 70 mKIAA1 TMQRIFNSLVYTEKISNGESEVQQLAKKIREKFNRYLDVVNR-NKQVVEASYTAHLTSPL .: .:. : ... . . .:. :.: .: mKIAA0 LVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIMYYDAKADAELDDPE 70 80 90 100 110 120 80 90 100 110 120 mKIAA1 TAIQDCCTIPPSM-MEF--DGNFNTNVSRTVSCDRLST------TVNSRAFNPGRDLNSV . .. . .. ..: : ::...:. . . .. : :: .: . :..: mKIAA0 SEDMERGSKTSALRLDFIEDPNFKNKVNYSYTAVQIPTDIYKGSTVILNELNWTEALENV 130 140 150 160 170 180 130 140 150 160 170 180 mKIAA1 LADNLKSNPGIKWQYFSSEEGIFTVFPAHKFRCKGS---YEHRSRPIYVSTVRPQSKHIV . .: ...: . :: :.: :. .:: .: . :. : :: :.. . . : .: mKIAA0 FIENRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGAS-SPKDMV 190 200 210 220 230 240 190 200 210 220 230 240 mKIAA1 VILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADAVRTCSLDQCYKTYLSPAT .:.: ..::. :.. : .. .:..... : ..: . . .. : :. :.: :. mKIAA0 IIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVS---CF-THLVQAN 250 260 270 280 290 300 250 260 270 280 290 300 mKIAA1 SETKRKMSTFVSSVKPSDSPTQHAVGFHRAFQLIRSTSNSTRFQANTDMVIIYLSAGITS ..:. .. :... . . : . .::. ::. ... :: :: . : :.... ..: mKIAA0 VRNKKVFKEAVQGMVAKGT-TGYKAGFEYAFDQLQN-SNITRANCNK-MIMMFTDGG--- 310 320 330 340 350 310 320 330 340 350 360 mKIAA1 KDSSEEDKKATLRVINEENGFLNNSVMILTYAL--MNDGVTGLKELAFLRDLAEQNSGKY ::. .. . :. .. : .: ..:... : :: :. .: :.: : mKIAA0 -----EDR---VQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMACT------NKGYY 360 370 380 390 400 370 380 390 400 410 420 mKIAA1 GIPDRTALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMT .: : :.. . .: . ..:: .. : .. .. .. . : .: ::..: mKIAA0 -----FEIPSI-GAIRINTQ--EYLDVLGRPMV-LAGKDAKQVQWTNVYEDALGLGLVVT 410 420 430 440 450 430 440 450 460 470 mKIAA1 VSKPCYF----------GNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLM . : . ..:.::..:.:: : : . . : . .:.: :: .::.:. mKIAA0 GTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPNYTLGANGYVFAIDLNGYVLL 460 470 480 490 500 510 480 490 500 510 520 530 mKIAA1 HPSLTRPYLLS-EPPLHTDIIHYE-NIPKFELVRQNILSLPLGSQIITVPVNSSLSWHIN ::.: .: . . :. :.. : . . : .:..... : . : . :.: .:. mKIAA0 HPNL-KPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGDKGHKQIRTLVKSLDERYID 520 530 540 550 560 570 540 550 560 570 580 590 mKIAA1 KLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLG .. . .:.: ...:.. : .:. : . : . .: mKIAA0 EVIR--------NYTWVPIRSTNYSLGLVL----------------PPYSTYYLQANLSD 580 590 600 600 610 620 630 640 mKIAA1 QPSACLHFKQLATLESPTVMLSAGS-FSSPYEHLSQPETKRMVEHYTAYLSDNTRLI--A : .:. : :. . : : : .: :. .. ... .. : .:.. .:. . mKIAA0 QILQVKYFEFLL----PSSFESEGHVFIAPREYCKDLNAS---DNNTEFLKNFIELMEKV 610 620 630 640 650 650 660 670 680 690 700 mKIAA1 NPGLK----FSVRNEVMATSHVTDEWMTQM-EMSSLNTY-IVRRYIATPNGVLRIYPGSL .: : : ..: .. :. .:.. . .. . ..:::: .. . :: .:. :..:.. mKIAA0 TPDSKQCNNFLLHNLILDTG-ITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKA 660 670 680 690 700 710 710 720 730 740 750 mKIAA1 MD---KAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHT . . .: ..: ... : : : . :. : mKIAA0 AEDWTENPEPFNASFYRRSLDNHGYI-FKPPHQDSLLRPLELENDTVGVLVSTAVELSLG 720 730 740 750 760 770 760 770 780 790 800 810 mKIAA1 VAVMRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLVDPKGHAPLEQQHITHK mKIAA0 RRTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKQCGPSSHCEMDCEVNNEDLLCVL 780 790 800 810 820 830 857 residues in 1 query sequences 1768160 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:48:35 2006 done: Mon Mar 27 10:48:36 2006 Scan time: 0.920 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]