FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0991.ptfa, 605 aa vs ./tmplib.26680 library 1768412 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9325+/-0.0064; mu= 0.2281+/- 0.425 mean_var=213.2306+/-53.936, 0's: 0 Z-trim: 8 B-trim: 143 in 1/35 Lambda= 0.0878 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4169 ( 281 res) mbg08918 ( 281) 1133 156 3.8e-39 mKIAA4020 ( 391 res) mfj24359 ( 391) 1033 144 3.1e-35 mKIAA0158 ( 367 res) mpm05359 ( 367) 987 138 1.7e-33 mKIAA0128 ( 449 res) mfj19346 ( 449) 849 120 3.6e-28 mKIAA0202 ( 470 res) mbh00446 ( 470) 792 113 5.6e-26 >>mKIAA4169 ( 281 res) mbg08918 (281 aa) initn: 1157 init1: 965 opt: 1133 Z-score: 795.1 bits: 156.1 E(): 3.8e-39 Smith-Waterman score: 1133; 74.449% identity (75.111% ungapped) in 227 aa overlap (325-550:37-262) 300 310 320 330 340 350 mKIAA0 EFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEE ::::::::::.::::::..:::. . . :: mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE 10 20 30 40 50 60 360 370 380 390 400 410 mKIAA0 RIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEE .::::.:::.: : ::: ::.:::::::::::::.:::::::.:: :.::.::::.:.:: mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE 70 80 90 100 110 120 420 430 440 450 460 470 mKIAA0 VNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEER ::: ::::::::::::::::: :::::::::.::::.:::::::.::::::::.::::. mKIAA4 VNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEK 130 140 150 160 170 180 480 490 500 510 520 530 mKIAA0 VYFKQRITADLLSNGIDVYPQKEFDEDAEDRLVNEKFR-EMIPFAVVGSDHEYQVNGKRI ::::. .: :::. ::::::::: ::. :.:.: : .::::::::.::::::::. mKIAA4 SEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRV 190 200 210 220 230 240 540 550 560 570 580 590 mKIAA0 LGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSNIHFEAYRVKRLNEGNSAMA ::::: :: :: : .: mKIAA4 LGRKTPWGIIE-GNPAHLPEGQAARRNRTDRRKEQL 250 260 270 280 >>mKIAA4020 ( 391 res) mfj24359 (391 aa) initn: 1016 init1: 316 opt: 1033 Z-score: 724.8 bits: 143.6 E(): 3.1e-35 Smith-Waterman score: 1033; 48.220% identity (49.175% ungapped) in 309 aa overlap (297-605:19-321) 270 280 290 300 310 320 mKIAA0 SCVGDMADNPRDAMLKQAPASRNEKAPMEFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQ ::::. .. .:. ::..:.::::..::::. mKIAA4 AEERSVNCGTMAQPKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGE 10 20 30 40 330 340 350 360 370 380 mKIAA0 SGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGF ::::::::::.:: . . : .:: ::..... :.: ::.. ::..::::: mKIAA4 SGLGKSTLINSLFLTDLYSPEY-PGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGF 50 60 70 80 90 100 390 400 410 420 430 440 mKIAA0 GDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLD :: ..: :::::.. .:....: ::. : .::.. .::.::.:::::: .::.:.::: mKIAA4 GDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQ-MPDNRVQCCLYFIAPSGHGLKPLD 110 120 130 140 150 160 450 460 470 480 490 500 mKIAA0 IEFMKRLSKVVNIVPVIAKADTLTLEERVYFKQRITADLLSNGIDVYPQKEFDEDAEDRL ::::::: . :::.:.:::::::: :: ::..: .. . : .: : :.. :..: mKIAA4 IEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDEEENKL 170 180 190 200 210 220 510 520 530 540 550 560 mKIAA0 VNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQ : .:... .:.:::::. .:::::. ::. ::. :::: ::.:. ::..::::::: mKIAA4 V-KKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQ 230 240 250 260 270 280 570 580 590 600 mKIAA0 NIKDITSNIHFEAYRVKRLNEGNSAMANGIEKEPEAQEM ..::.:.:.:.: :: ..: .. ::.... . .. mKIAA4 DLKDVTNNVHYENYRSRKLA---AVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKK 290 300 310 320 330 340 mKIAA4 MEMEMEQVFEMKVKEKVQKLKDSEAEVISLISSLSVFLLNKFKLYLYIL 350 360 370 380 390 >>mKIAA0158 ( 367 res) mpm05359 (367 aa) initn: 629 init1: 456 opt: 987 Z-score: 693.7 bits: 137.7 E(): 1.7e-33 Smith-Waterman score: 987; 45.104% identity (47.352% ungapped) in 337 aa overlap (280-605:7-338) 250 260 270 280 290 300 mKIAA0 SVAEVPYRNQEDSEVTPSCVGDMADNPRDAMLKQAPASR-NEKAPMEFGYVGIDSILEQM : :: :.. : ..: ::::. .. .:. mKIAA0 TGKSRKMSKQQPTQFINPETP---GYVGFANLPNQV 10 20 30 310 320 330 340 350 360 mKIAA0 RRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHD .::..:.::::..::::.::::::::::.:: . . . . : . :.: .:..:.. : . mKIAA0 HRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVE 40 50 60 70 80 90 370 380 390 400 410 420 mKIAA0 IEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV :::.::...:::.::::.:: :: ..:.. :...:..:.:.::..: ..::.. : :.:: mKIAA0 IEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRH-IIDNRV 100 110 120 130 140 150 430 440 450 460 470 480 mKIAA0 HCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVYFKQRITADLLSN :::.::: ::.:.:::. ::: . . :::::::::::::::.:: .:.:: .. . mKIAA0 HCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEH 160 170 180 190 200 210 490 500 510 520 530 540 mKIAA0 GIDVY--PQKEFDEDAEDRLVNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVE .: .: :. : ::: . . .. .. :::.::::.. ...::.. :: ::..::: mKIAA0 SIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVE 220 230 240 250 260 270 550 560 570 580 590 mKIAA0 NTTHCEFAYLRDLLIRTHMQNIKDITSNIHFEAYRVKRLNEGNSAMANG--------IEK : : .: :: .:: ::::.....:...:.: .: .::..:. . : .:: mKIAA0 NPEHNDFLKLRTMLI-THMQDLQEVTQDLHYENFRSERLKRGGRKVENEDMNKDQILLEK 280 290 300 310 320 330 600 mKIAA0 EPEAQEM : : ..: mKIAA0 EAELRRMQEMIARMQAQMQMQMQGGDSDSGALGQHV 340 350 360 >>mKIAA0128 ( 449 res) mfj19346 (449 aa) initn: 774 init1: 239 opt: 849 Z-score: 598.1 bits: 120.3 E(): 3.6e-28 Smith-Waterman score: 849; 41.141% identity (43.770% ungapped) in 333 aa overlap (267-587:3-327) 240 250 260 270 280 290 mKIAA0 PMSQLQSRLEPRPSVAEVPYRNQEDSEVTPSCVG-DMADNPRDAMLKQAPASRNEKA--- ::.. .:. :. :. :. . . : mKIAA0 SVSCAAAPVAEAPEAALADQGAMAAADIARQV 10 20 30 300 310 320 330 340 mKIAA0 -------PMEFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR :. :.::.::. .:. :...::: :::. ::..:::::::..:::..:. mKIAA0 GEDCRTVPLA-GHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEG 40 50 60 70 80 90 350 360 370 380 390 400 mKIAA0 KSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFIND .:... . : ....: :.:..:..: .:::...: ::::.::.:. ..::..::. mKIAA0 ---EPATHTQ-PG-VQLQSNTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDA 100 110 120 130 140 410 420 430 440 450 460 mKIAA0 QYEKYLQEEVNINRK-KRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIA :.: :::::..: : . :.:.: ::::: :::::. ::. ::.:.. :::.:::: mKIAA0 QFEAYLQEELKIRRVLHSYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIA 150 160 170 180 190 200 470 480 490 500 510 520 mKIAA0 KADTLTLEERVYFKQRITADLLSNGIDVYPQKEFDEDAEDRLVNEKFREMIPFAVVGSDH :.:... : . :: .::..:.:::...: ::.. . .: . .::::::: . mKIAA0 KSDAISKSELAKFKIKITSELVSNGVQIYQFPTDDESVSE--INGTMNAHLPFAVVGSTE 210 220 230 240 250 260 530 540 550 560 570 580 mKIAA0 EYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSNIHFEAYRVKR : ....: . .:. :::..::: .::.:. ::..:::..:..... : :.: :: . mKIAA0 EVKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRVNMEDLREQTHARHYELYRRCK 270 280 290 300 310 320 590 600 mKIAA0 LNEGNSAMANGIEKEPEAQEM :.: mKIAA0 LEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEK 330 340 350 360 370 380 >>mKIAA0202 ( 470 res) mbh00446 (470 aa) initn: 751 init1: 263 opt: 792 Z-score: 558.8 bits: 113.1 E(): 5.6e-26 Smith-Waterman score: 792; 40.594% identity (41.837% ungapped) in 303 aa overlap (299-600:66-360) 270 280 290 300 310 320 mKIAA0 VGDMADNPRDAMLKQAPASRNEKAPMEFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSG .:. . : . :.. ::: :::. ::..: mKIAA0 PVRSSPWRPPTWNASRTQSLSPGACPWAAMLGLTASLTSWSVKSVTQGFSFNILCVGETG 40 50 60 70 80 90 330 340 350 360 370 380 mKIAA0 LGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGD .::.::.::::.. . . .. : .... :.:..:..:..:::..:. :::: mKIAA0 IGKATLMNTLFNTTFETEEASHHEE-----CVRLRPQTYDLQESNVHLKLTIVDAVGFGD 100 110 120 130 140 150 390 400 410 420 430 440 mKIAA0 HINNENCWQPIMKFINDQYEKYLQEEVNINRKK-RIPDTRVHCCLYFIPATGHSLRPLDI .::... ..::. .:. :.:.:::::..: :. :::.: ::::: :::::. ::. mKIAA0 QINKDDSYRPIVDYIDAQFENYLQEELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDL 160 170 180 190 200 210 450 460 470 480 490 500 mKIAA0 EFMKRLSKVVNIVPVIAKADTLTLEERVYFKQRITADLLSNGIDVYPQKEFDEDAEDRLV ::.:.. :::.:.::::::.. : :: .: ..:.:::...: : :..: . . mKIAA0 VTMKKLDSKVNIIPIIAKADTISKSELHKFKIKIMGELVSNGVQIY-QFPTDDEAVAE-I 220 230 240 250 260 510 520 530 540 550 560 mKIAA0 NEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQN : . .::::::: .: .:..: . .:. ::...::: .::.:. ::..:::..:.. mKIAA0 NAVMNAHLPFAVVGSTEEVKVGNKLVRARQYPWGVVQVENENHCDFVKLREMLIRVNMED 270 280 290 300 310 320 570 580 590 600 mKIAA0 IKDITSNIHFEAYRVKRLNEGNSAMANGIEKEPEAQEM ... : . :.: :: .:.: . ..: ...: mKIAA0 LREQTHSRHYELYRRCKLEEMGFQDSDG-DSQPFSLQETYEAKRKEFLSELQRKEEEMRQ 330 340 350 360 370 380 mKIAA0 MFVNKVKETELELKEKERELHEKFEHLKRIHQEEKRKVEEKRRELEEETNAFNCRKAAME 390 400 410 420 430 440 605 residues in 1 query sequences 1768412 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:33:30 2006 done: Mon Mar 27 10:33:31 2006 Scan time: 0.760 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]