# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph02030.fasta.nr -Q ../query/mKIAA3017.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA3017, 710 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916084 sequences Expectation_n fit: rho(ln(x))= 5.0215+/-0.000183; mu= 13.0337+/- 0.010 mean_var=71.4937+/-13.773, 0's: 31 Z-trim: 64 B-trim: 39 in 1/65 Lambda= 0.151684 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|124297999|gb|AAI31683.1| Bcr protein [Mus muscu ( 983) 4612 1019.1 0 gi|148699983|gb|EDL31930.1| mCG117508 [Mus musculu (1222) 4612 1019.2 0 gi|124487229|ref|NP_001074881.1| breakpoint cluste (1270) 4612 1019.2 0 gi|109509974|ref|XP_001079915.1| PREDICTED: simila (1195) 4602 1017.0 0 gi|109509356|ref|XP_228091.4| PREDICTED: similar t (1200) 4602 1017.0 0 gi|149043782|gb|EDL97233.1| breakpoint cluster reg (1251) 4602 1017.0 0 gi|37994655|gb|AAH60270.1| Bcr protein [Mus muscul (1059) 4601 1016.7 0 gi|124007119|sp|Q6PAJ1.2|BCR_MOUSE RecName: Full=B (1270) 4601 1016.8 0 gi|194381916|dbj|BAG64327.1| unnamed protein produ ( 860) 4479 989.9 0 gi|168270834|dbj|BAG10210.1| breakpoint cluster re (1271) 4479 990.1 0 gi|68533037|dbj|BAE06073.1| BCR variant protein [H (1287) 4479 990.1 0 gi|119579969|gb|EAW59565.1| breakpoint cluster reg ( 820) 4475 989.0 0 gi|119579970|gb|EAW59566.1| breakpoint cluster reg ( 844) 4475 989.1 0 gi|487346|gb|AAB60389.1| breakpoint cluster region ( 889) 4475 989.1 0 gi|487347|gb|AAB60390.1| breakpoint cluster region ( 936) 4475 989.1 0 gi|143811366|sp|P11274.2|BCR_HUMAN RecName: Full=B (1271) 4475 989.2 0 gi|29421|emb|CAA26441.1| bcr [Homo sapiens] (1271) 4473 988.8 0 gi|73995657|ref|XP_848654.1| PREDICTED: similar to (1291) 4455 984.8 0 gi|194213972|ref|XP_001488555.2| PREDICTED: simila (1175) 4438 981.1 0 gi|118098742|ref|XP_415244.2| PREDICTED: similar t (1296) 4407 974.3 0 gi|224072079|ref|XP_002196717.1| PREDICTED: simila (1349) 4394 971.5 0 gi|119909684|ref|XP_001256514.1| PREDICTED: simila ( 988) 4322 955.6 0 gi|194043317|ref|XP_001925930.1| PREDICTED: simila ( 673) 4077 901.9 0 gi|189442279|gb|AAI67580.1| LOC100170543 protein [ (1162) 3983 881.5 0 gi|125847768|ref|XP_696735.2| PREDICTED: si:dkey-8 (1315) 3951 874.5 0 gi|169146027|emb|CAQ14560.1| novel protein similar (1290) 3938 871.7 0 gi|224530|prf||1107276A gene bcr ( 589) 3704 820.2 0 gi|149053445|gb|EDM05262.1| active BCR-related gen ( 859) 3353 743.5 7.3e-212 gi|215275190|sp|A6QNS3.1|ABR_BOVIN RecName: Full=A ( 859) 3352 743.3 8.4e-212 gi|149724140|ref|XP_001504310.1| PREDICTED: active ( 822) 3349 742.6 1.3e-211 gi|149724138|ref|XP_001504307.1| PREDICTED: active ( 871) 3349 742.7 1.3e-211 gi|38683820|ref|NP_942597.1| active BCR-related is ( 813) 3348 742.4 1.5e-211 gi|81910107|sp|Q5SSL4.1|ABR_MOUSE RecName: Full=Ac ( 859) 3348 742.4 1.5e-211 gi|35193289|gb|AAH58708.1| Active BCR-related gene ( 871) 3348 742.4 1.6e-211 gi|73967116|ref|XP_537757.2| PREDICTED: similar to ( 822) 3347 742.2 1.7e-211 gi|73967124|ref|XP_854321.1| PREDICTED: similar to ( 859) 3347 742.2 1.8e-211 gi|73967126|ref|XP_868379.1| PREDICTED: similar to ( 871) 3347 742.2 1.8e-211 gi|126314158|ref|XP_001364422.1| PREDICTED: simila ( 822) 3345 741.8 2.4e-211 gi|126314156|ref|XP_001364341.1| PREDICTED: simila ( 859) 3345 741.8 2.4e-211 gi|221040658|dbj|BAH12006.1| unnamed protein produ ( 769) 3344 741.5 2.6e-211 gi|119611037|gb|EAW90631.1| active BCR-related gen ( 822) 3344 741.5 2.7e-211 gi|119611039|gb|EAW90633.1| active BCR-related gen ( 859) 3344 741.6 2.8e-211 gi|5915668|sp|Q12979.1|ABR_HUMAN RecName: Full=Act ( 859) 3344 741.6 2.8e-211 gi|193784898|dbj|BAG54051.1| unnamed protein produ ( 813) 3342 741.1 3.7e-211 gi|221044200|dbj|BAH13777.1| unnamed protein produ ( 813) 3339 740.4 5.8e-211 gi|168984240|emb|CAI24542.3| active BCR-related ge ( 830) 3333 739.1 1.5e-210 gi|1082164|pir||B47485 ABR protein 2 - human ( 813) 3312 734.5 3.5e-209 gi|388303|gb|AAC37519.1| alternative first exon ( 822) 3312 734.5 3.5e-209 gi|215275191|sp|A4II46.1|ABR_XENTR RecName: Full=A ( 862) 3228 716.2 1.2e-203 gi|111307850|gb|AAI21372.1| Hypothetical protein M ( 870) 3228 716.2 1.3e-203 >>gi|124297999|gb|AAI31683.1| Bcr protein [Mus musculus] (983 aa) initn: 4612 init1: 4612 opt: 4612 Z-score: 5448.2 bits: 1019.1 E(): 0 Smith-Waterman score: 4612; 100.000% identity (100.000% similar) in 710 aa overlap (1-710:274-983) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|124 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 310 320 330 340 350 360 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 370 380 390 400 410 420 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 430 440 450 460 470 480 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 490 500 510 520 530 540 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 550 560 570 580 590 600 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 610 620 630 640 650 660 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ 670 680 690 700 710 720 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 730 740 750 760 770 780 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 790 800 810 820 830 840 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 850 860 870 880 890 900 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 910 920 930 940 950 960 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|124 LEAIPAPDSKRQSILFSTEV 970 980 >>gi|148699983|gb|EDL31930.1| mCG117508 [Mus musculus] (1222 aa) initn: 4612 init1: 4612 opt: 4612 Z-score: 5446.9 bits: 1019.2 E(): 0 Smith-Waterman score: 4612; 100.000% identity (100.000% similar) in 710 aa overlap (1-710:513-1222) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|148 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 670 680 690 700 710 720 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 730 740 750 760 770 780 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 790 800 810 820 830 840 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 850 860 870 880 890 900 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ 910 920 930 940 950 960 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 970 980 990 1000 1010 1020 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1030 1040 1050 1060 1070 1080 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1090 1100 1110 1120 1130 1140 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1150 1160 1170 1180 1190 1200 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|148 LEAIPAPDSKRQSILFSTEV 1210 1220 >>gi|124487229|ref|NP_001074881.1| breakpoint cluster re (1270 aa) initn: 4612 init1: 4612 opt: 4612 Z-score: 5446.6 bits: 1019.2 E(): 0 Smith-Waterman score: 4612; 100.000% identity (100.000% similar) in 710 aa overlap (1-710:561-1270) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|124 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 540 550 560 570 580 590 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 600 610 620 630 640 650 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 660 670 680 690 700 710 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 720 730 740 750 760 770 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 780 790 800 810 820 830 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 840 850 860 870 880 890 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 900 910 920 930 940 950 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ 960 970 980 990 1000 1010 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 1020 1030 1040 1050 1060 1070 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1080 1090 1100 1110 1120 1130 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1140 1150 1160 1170 1180 1190 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1200 1210 1220 1230 1240 1250 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|124 LEAIPAPDSKRQSILFSTEV 1260 1270 >>gi|109509974|ref|XP_001079915.1| PREDICTED: similar to (1195 aa) initn: 4602 init1: 4602 opt: 4602 Z-score: 5435.2 bits: 1017.0 E(): 0 Smith-Waterman score: 4602; 99.718% identity (100.000% similar) in 710 aa overlap (1-710:486-1195) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|109 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 580 590 600 610 620 630 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 640 650 660 670 680 690 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 700 710 720 730 740 750 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 760 770 780 790 800 810 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 VHHIPLTINKEDDESPGLYGFLHAIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 820 830 840 850 860 870 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMAKEDGESADKLMGKGQVQLDPQTLQ 880 890 900 910 920 930 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 940 950 960 970 980 990 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1000 1010 1020 1030 1040 1050 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1060 1070 1080 1090 1100 1110 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1120 1130 1140 1150 1160 1170 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|109 LEAIPAPDSKRQSILFSTEV 1180 1190 >>gi|109509356|ref|XP_228091.4| PREDICTED: similar to br (1200 aa) initn: 4602 init1: 4602 opt: 4602 Z-score: 5435.2 bits: 1017.0 E(): 0 Smith-Waterman score: 4602; 99.718% identity (100.000% similar) in 710 aa overlap (1-710:491-1200) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|109 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 VHHIPLTINKEDDESPGLYGFLHAIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMAKEDGESADKLMGKGQVQLDPQTLQ 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1070 1080 1090 1100 1110 1120 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1130 1140 1150 1160 1170 1180 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|109 LEAIPAPDSKRQSILFSTEV 1190 1200 >>gi|149043782|gb|EDL97233.1| breakpoint cluster region (1251 aa) initn: 4602 init1: 4602 opt: 4602 Z-score: 5434.9 bits: 1017.0 E(): 0 Smith-Waterman score: 4602; 99.718% identity (100.000% similar) in 710 aa overlap (1-710:542-1251) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|149 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 520 530 540 550 560 570 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 580 590 600 610 620 630 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 640 650 660 670 680 690 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 700 710 720 730 740 750 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 760 770 780 790 800 810 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 820 830 840 850 860 870 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|149 VHHIPLTINKEDDESPGLYGFLHAIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 880 890 900 910 920 930 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|149 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMAKEDGESADKLMGKGQVQLDPQTLQ 940 950 960 970 980 990 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 1000 1010 1020 1030 1040 1050 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1060 1070 1080 1090 1100 1110 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1120 1130 1140 1150 1160 1170 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1180 1190 1200 1210 1220 1230 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|149 LEAIPAPDSKRQSILFSTEV 1240 1250 >>gi|37994655|gb|AAH60270.1| Bcr protein [Mus musculus] (1059 aa) initn: 4601 init1: 4601 opt: 4601 Z-score: 5434.7 bits: 1016.7 E(): 0 Smith-Waterman score: 4601; 99.859% identity (99.859% similar) in 710 aa overlap (1-710:350-1059) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|379 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 320 330 340 350 360 370 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 380 390 400 410 420 430 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 440 450 460 470 480 490 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 500 510 520 530 540 550 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 560 570 580 590 600 610 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 620 630 640 650 660 670 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 680 690 700 710 720 730 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ 740 750 760 770 780 790 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 800 810 820 830 840 850 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 860 870 880 890 900 910 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 920 930 940 950 960 970 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|379 KETVNKMSLHNLATVFGPTLLRSSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 980 990 1000 1010 1020 1030 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|379 LEAIPAPDSKRQSILFSTEV 1040 1050 >>gi|124007119|sp|Q6PAJ1.2|BCR_MOUSE RecName: Full=Break (1270 aa) initn: 4601 init1: 4601 opt: 4601 Z-score: 5433.6 bits: 1016.8 E(): 0 Smith-Waterman score: 4601; 99.859% identity (99.859% similar) in 710 aa overlap (1-710:561-1270) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|124 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 540 550 560 570 580 590 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT 600 610 620 630 640 650 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 660 670 680 690 700 710 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 720 730 740 750 760 770 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS 780 790 800 810 820 830 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT 840 850 860 870 880 890 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 900 910 920 930 940 950 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ 960 970 980 990 1000 1010 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 1020 1030 1040 1050 1060 1070 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1080 1090 1100 1110 1120 1130 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1140 1150 1160 1170 1180 1190 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|124 KETVNKMSLHNLATVFGPTLLRSSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1200 1210 1220 1230 1240 1250 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|124 LEAIPAPDSKRQSILFSTEV 1260 1270 >>gi|194381916|dbj|BAG64327.1| unnamed protein product [ (860 aa) initn: 4479 init1: 4479 opt: 4479 Z-score: 5291.7 bits: 989.9 E(): 0 Smith-Waterman score: 4479; 96.620% identity (98.873% similar) in 710 aa overlap (1-710:151-860) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|194 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::: :::::::::::::::::::::::::.:: :::::::::::::::::: gi|194 RAFVDNYGVAMEMAEKCCQANAQFAEISENLRARSNKDAKDPTTKNSLETLLYKPVDRVT 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK ::::::::::::::.::::: ::::::::::::::::::::::::::::::::::::::: gi|194 RSTLVLHDLLKHTPASHPDHPLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|194 DSFMVELVEGARKLRHVFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :.::::::::::::::::::::::::::::::::::::. :::.:::::::::::::::: gi|194 AVPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKATERLKKKLSEQESLLLLMSPS 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT ::::::::::::::::::::::::::::.:::::::::.::::::::::::::::::::: gi|194 MAFRVHSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSCVKLQT 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :: :::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|194 VHSIPLTINKEDDESPGLYGFLNVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ ::.::::::::::::::::::::::::::::: :. ::::::.:.::::::::::::.:: gi|194 DTAEPNWNEEFEIELEGSQTLRILCYEKCYNKTKIPKEDGESTDRLMGKGQVQLDPQALQ 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV ::::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::: gi|194 DRDWQRTVIAMNGIEVKLSVKFNSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 790 800 810 820 830 840 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|194 LEAIPAPDSKRQSILFSTEV 850 860 >>gi|168270834|dbj|BAG10210.1| breakpoint cluster region (1271 aa) initn: 4479 init1: 4479 opt: 4479 Z-score: 5289.3 bits: 990.1 E(): 0 Smith-Waterman score: 4479; 96.620% identity (98.873% similar) in 710 aa overlap (1-710:562-1271) 10 20 30 mKIAA3 DGLFPRVQQWSHQQRVGDLFQKLASQLGVY :::::::::::::::::::::::::::::: gi|168 TTSQPVLTSQQIETIFFKVPELYEIHKEFYDGLFPRVQQWSHQQRVGDLFQKLASQLGVY 540 550 560 570 580 590 40 50 60 70 80 90 mKIAA3 RAFVDNYGVAMETAEKCCQANAQFAEISENLRARSNKDVKDSTTKNSLETLLYKPVDRVT :::::::::::: :::::::::::::::::::::::::.:: :::::::::::::::::: gi|168 RAFVDNYGVAMEMAEKCCQANAQFAEISENLRARSNKDAKDPTTKNSLETLLYKPVDRVT 600 610 620 630 640 650 100 110 120 130 140 150 mKIAA3 RSTLVLHDLLKHTPSSHPDHSLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK ::::::::::::::.::::: ::::::::::::::::::::::::::::::::::::::: gi|168 RSTLVLHDLLKHTPASHPDHPLLQDALRISQNFLSSINEEITPRRQSMTVKKGEHRQLLK 660 670 680 690 700 710 160 170 180 190 200 210 mKIAA3 DSFMVELVEGARKLRHIFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|168 DSFMVELVEGARKLRHVFLFTDLLLCTKLKKQSGGKTQQYDCKWYIPLTDLSFQMVDELE 720 730 740 750 760 770 220 230 240 250 260 270 mKIAA3 ALPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKVMERLRKKLSEQESLLLLMSPS :.::::::::::::::::::::::::::::::::::::. :::.:::::::::::::::: gi|168 AVPNIPLVPDEELDALKIKISQIKSDIQREKRANKGSKATERLKKKLSEQESLLLLMSPS 780 790 800 810 820 830 280 290 300 310 320 330 mKIAA3 MAFRVHSRNGKSYTFLISSDYERAEWRESIREQQKKCFKSFSLTSVELQMLTNSCVKLQT ::::::::::::::::::::::::::::.:::::::::.::::::::::::::::::::: gi|168 MAFRVHSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSCVKLQT 840 850 860 870 880 890 340 350 360 370 380 390 mKIAA3 VHHIPLTINKEDDESPGLYGFLHVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR :: :::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|168 VHSIPLTINKEDDESPGLYGFLNVIVHSATGFKQSSNLYCTLEVDSFGYFVNKAKTRVYR 900 910 920 930 940 950 400 410 420 430 440 450 mKIAA3 DTTEPNWNEEFEIELEGSQTLRILCYEKCYNKMKMTKEDGESADKLMGKGQVQLDPQTLQ ::.::::::::::::::::::::::::::::: :. ::::::.:.::::::::::::.:: gi|168 DTAEPNWNEEFEIELEGSQTLRILCYEKCYNKTKIPKEDGESTDRLMGKGQVQLDPQALQ 960 970 980 990 1000 1010 460 470 480 490 500 510 mKIAA3 DRDWQRTVIDMNGIEVKLSVKFTSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV ::::::::: ::::::::::::.::::::::::::::::::::::::::::::::::::: gi|168 DRDWQRTVIAMNGIEVKLSVKFNSREFSLKRMPSRKQTGVFGVKIAVVTKRERSKVPYIV 1020 1030 1040 1050 1060 1070 520 530 540 550 560 570 mKIAA3 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNKDVSVMMSEMDVNAIAGTLKLY 1080 1090 1100 1110 1120 1130 580 590 600 610 620 630 mKIAA3 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 FRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAE 1140 1150 1160 1170 1180 1190 640 650 660 670 680 690 mKIAA3 KETVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDSWSLEVMSQVQVLLYFLQ 1200 1210 1220 1230 1240 1250 700 710 mKIAA3 LEAIPAPDSKRQSILFSTEV :::::::::::::::::::: gi|168 LEAIPAPDSKRQSILFSTEV 1260 1270 710 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 23:09:51 2009 done: Mon Mar 16 23:17:49 2009 Total Scan time: 1054.680 Total Display time: 0.360 Function used was FASTA [version 34.26.5 April 26, 2007]