# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph01963.fasta.nr -Q ../query/mFLJ00144.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00144, 413 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921271 sequences Expectation_n fit: rho(ln(x))= 5.0162+/-0.000181; mu= 11.7065+/- 0.010 mean_var=69.5502+/-13.856, 0's: 26 Z-trim: 30 B-trim: 2755 in 1/66 Lambda= 0.153789 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81906104|sp|Q9DBS1.1|TMM43_MOUSE RecName: Full= ( 400) 2621 590.4 2.4e-166 gi|81883820|sp|Q5XIP9.1|TMM43_RAT RecName: Full=Tr ( 400) 2565 578.0 1.3e-162 gi|194221045|ref|XP_001489843.2| PREDICTED: simila ( 400) 2519 567.8 1.6e-159 gi|73984530|ref|XP_541751.2| PREDICTED: similar to ( 400) 2494 562.2 7.3e-158 gi|55619885|ref|XP_516299.1| PREDICTED: hypothetic ( 400) 2484 560.0 3.4e-157 gi|12053327|emb|CAB66850.1| hypothetical protein [ ( 400) 2482 559.6 4.6e-157 gi|74733151|sp|Q9BTV4.1|TMM43_HUMAN RecName: Full= ( 400) 2482 559.6 4.6e-157 gi|151556045|gb|AAI49965.1| TMEM43 protein [Bos ta ( 400) 2475 558.0 1.4e-156 gi|22760828|dbj|BAC11350.1| unnamed protein produc ( 400) 2473 557.6 1.8e-156 gi|109097987|ref|XP_001090994.1| PREDICTED: simila ( 400) 2472 557.4 2.2e-156 gi|75041781|sp|Q5R9S8.1|TMM43_PONAB RecName: Full= ( 400) 2469 556.7 3.4e-156 gi|15079833|gb|AAH11719.1| Transmembrane protein 4 ( 400) 2468 556.5 4e-156 gi|126336469|ref|XP_001376969.1| PREDICTED: hypoth ( 448) 2315 522.6 7.2e-146 gi|114585523|ref|XP_001157197.1| PREDICTED: hypoth ( 350) 2181 492.8 5.3e-137 gi|50754425|ref|XP_414378.1| PREDICTED: hypothetic ( 400) 1996 451.8 1.3e-124 gi|39644828|gb|AAH08054.2| TMEM43 protein [Homo sa ( 314) 1984 449.0 7e-124 gi|224066175|ref|XP_002194699.1| PREDICTED: transm ( 424) 1973 446.7 4.8e-123 gi|119584590|gb|EAW64186.1| transmembrane protein ( 325) 1827 414.2 2.2e-113 gi|73984532|ref|XP_858314.1| PREDICTED: similar to ( 424) 1637 372.1 1.3e-100 gi|47229668|emb|CAG06864.1| unnamed protein produc ( 402) 1523 346.8 5.2e-93 gi|223648700|gb|ACN11108.1| Transmembrane protein ( 401) 1513 344.6 2.4e-92 gi|14042792|dbj|BAB55396.1| unnamed protein produc ( 228) 1434 326.9 3e-87 gi|18676494|dbj|BAB84899.1| FLJ00144 protein [Homo ( 255) 1434 326.9 3.2e-87 gi|14042161|dbj|BAB55131.1| unnamed protein produc ( 228) 1428 325.5 7.5e-87 gi|149636441|ref|XP_001507428.1| PREDICTED: hypoth ( 248) 1318 301.2 1.8e-79 gi|158254049|gb|AAI54205.1| Zgc:85946 protein [Dan ( 391) 1298 296.9 5.5e-78 gi|210125069|gb|EEA72762.1| hypothetical protein B ( 417) 1232 282.3 1.5e-73 gi|46249742|gb|AAH68431.1| Zgc:85946 [Danio rerio] ( 282) 977 225.6 1.2e-56 gi|198436230|ref|XP_002119557.1| PREDICTED: simila ( 392) 967 223.4 7e-56 gi|224133912|ref|XP_002198847.1| PREDICTED: hypoth ( 236) 947 218.8 1e-54 gi|156213881|gb|EDO34886.1| predicted protein [Nem ( 295) 884 204.9 2e-50 gi|149567318|ref|XP_001508488.1| PREDICTED: hypoth ( 179) 803 186.8 3.4e-45 gi|115760332|ref|XP_798642.2| PREDICTED: hypotheti ( 410) 766 178.9 1.9e-42 gi|189442687|gb|AAI67528.1| LOC100170516 protein [ ( 274) 733 171.4 2.3e-40 gi|156209132|gb|EDO30463.1| predicted protein [Nem ( 361) 722 169.1 1.5e-39 gi|221113703|ref|XP_002164934.1| PREDICTED: simila ( 591) 708 166.1 1.9e-38 gi|149821347|gb|EDM80749.1| hypothetical protein P ( 383) 680 159.8 1e-36 gi|194118581|gb|EDW40624.1| GM24982 [Drosophila se ( 376) 666 156.6 8.6e-36 gi|194196042|gb|EDX09618.1| GD13030 [Drosophila si ( 376) 659 155.1 2.5e-35 gi|194155459|gb|EDW70643.1| GJ11423 [Drosophila vi ( 375) 658 154.9 2.9e-35 gi|91082813|ref|XP_968677.1| PREDICTED: similar to ( 374) 655 154.2 4.7e-35 gi|14023306|dbj|BAB49913.1| mll2895 [Mesorhizobium ( 425) 655 154.2 5.1e-35 gi|152068145|gb|EDN66785.1| membrane protein conta ( 406) 654 154.0 5.8e-35 gi|17944411|gb|AAL48096.1| RE72948p [Drosophila me ( 376) 653 153.8 6.4e-35 gi|74870699|sp|Q9VSB9.1|TMM43_DROME RecName: Full= ( 376) 653 153.8 6.4e-35 gi|54641265|gb|EAL30015.1| GA20832 [Drosophila pse ( 376) 646 152.2 1.9e-34 gi|193919401|gb|EDW18268.1| GI12188 [Drosophila mo ( 375) 642 151.3 3.4e-34 gi|144898804|emb|CAM75668.1| protein containing DU ( 387) 639 150.7 5.6e-34 gi|55238606|gb|EAA10811.3| AGAP005797-PA [Anophele ( 375) 633 149.3 1.4e-33 gi|210093261|gb|EEA41468.1| hypothetical protein B ( 356) 624 147.3 5.3e-33 >>gi|81906104|sp|Q9DBS1.1|TMM43_MOUSE RecName: Full=Tran (400 aa) initn: 2621 init1: 2621 opt: 2621 Z-score: 3142.7 bits: 590.4 E(): 2.4e-166 Smith-Waterman score: 2621; 100.000% identity (100.000% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF ::::::::::::::::::::::::::::::::::::::::::::::: gi|819 MAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE 350 360 370 380 390 400 >>gi|81883820|sp|Q5XIP9.1|TMM43_RAT RecName: Full=Transm (400 aa) initn: 2565 init1: 2565 opt: 2565 Z-score: 3075.6 bits: 578.0 E(): 1.3e-162 Smith-Waterman score: 2565; 97.250% identity (99.500% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF ::::::::.::::::::::.::::::::::::::::::::.:::::: gi|818 MAANYSSTGSRKEHVKVTSDPQPGFLERLSETSGGMFVGLVTFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG ::::::::::::::. :::::::::::::::::::::::::::::::::::::::::::: gi|818 YLIFTNEGRALKTANLLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH :::::::::::::::::::::::.:::::::::::::::::::::::::.:.:::::::: gi|818 VHLPAVKLRRHVEMYQWVETEESNEYTEDGQVKKETKYSYNTEWRSEIVSSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|818 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKPLSLAKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE :::::::::::::::::::::::::::::::.::::::::::::::::.:::: gi|818 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALLGCLALVPIIIARTRVPTKKLE 350 360 370 380 390 400 >>gi|194221045|ref|XP_001489843.2| PREDICTED: similar to (400 aa) initn: 2519 init1: 2519 opt: 2519 Z-score: 3020.4 bits: 567.8 E(): 1.6e-159 Smith-Waterman score: 2519; 94.250% identity (98.500% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::.:.:.::::.:.:::::::::::::::::::::::::::: gi|194 MAANYSSSSNRREHVKTTTEPQPGFLERLSETSGGMFVGLMTFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::: : .::::::::::::::::::::::: gi|194 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKTERRYSYNTEWRSEIVNSRNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::::::::::::::::::::::::::::: :::.::::::::::::::.::: gi|194 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKPLSLSKLEDPHVDIIRRGDYFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.::::::::::.::::::::::::::::::::::.::::.::::::::: gi|194 SENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPYSTRSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG :::::::::::::::::.::::::::::::::: ::.::::::::::::::.:::::::: gi|194 HGDFSAEEVFRREQKSNAMKTWGLRAAGWMAMFTGLTLMTRILYTLVDWFPIFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE :::::::.::::::::::::::::::::: .:::::::::::::::::::::: gi|194 LKAFAFCMATSLTLLTVAAGWLFYRPLWALFIGCLALVPIIIARTRVPAKKLE 350 360 370 380 390 400 >>gi|73984530|ref|XP_541751.2| PREDICTED: similar to tra (400 aa) initn: 2494 init1: 2494 opt: 2494 Z-score: 2990.4 bits: 562.2 E(): 7.3e-158 Smith-Waterman score: 2494; 93.750% identity (98.750% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::.:..::::::::::::::::::::::::::: gi|739 MAANYSSTSNRREHVKTTTKPQPGFLERLSETSGGMFVGLMTFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::: ::.::::::::::::::::::::::: gi|739 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKTETRYSYNTEWRSEIVNSRNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::::::::::::::::::::::::.:::: ::::::.:::::::::::.::: gi|739 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKVDNFKPLSLAKLDDPHVDIIRRGDYFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH ::::::::::::::::::::::.::::::::::::::::::::::.:::::::::::::: gi|739 SENPKYPEVGDVRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPYSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.::.::::.::::::::::.::::::::::::.::::::::.:::::.:: gi|739 HGDFSAEEVFHRERKSNSLKTWGLRAAGWLAMFMGLNLMTRIVYTLVDWFPIFRDLVDIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::: : .:.:::::::::::::::::::: gi|739 LKAFAFCVATSLTLLTVAAGWLFYRPLCALFISCLALVPIIIARTRVPAKKLE 350 360 370 380 390 400 >>gi|55619885|ref|XP_516299.1| PREDICTED: hypothetical p (400 aa) initn: 2484 init1: 2484 opt: 2484 Z-score: 2978.5 bits: 560.0 E(): 3.4e-157 Smith-Waterman score: 2484; 93.000% identity (98.250% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::: . ::::::::::::::::::::.::::: gi|556 MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::::::.:::::::::::.::.:::::::: gi|556 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::::::::::::::::::.:::::.::::.:::.:::::::::::::::::: gi|556 KNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.::::::::::.:::::::::::::::.::::::.:.:::::::::::: gi|556 SENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIAQQRGDQLVPFSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.:: .::::::::::::::::::::::::::::::::::::::::::::: gi|556 HGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::::: ::. ::::::..::::::::::: gi|556 LKAFAFCVATSLTLLTVAAGWLFYRPLWALLIASLALVPILVARTRVPAKKLE 350 360 370 380 390 400 >>gi|12053327|emb|CAB66850.1| hypothetical protein [Homo (400 aa) initn: 2482 init1: 2482 opt: 2482 Z-score: 2976.1 bits: 559.6 E(): 4.6e-157 Smith-Waterman score: 2482; 93.000% identity (98.250% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::: . ::::::::::::::::::::.::::: gi|120 MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::::::.:::::::::::.::.:::::::: gi|120 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH .:::::::::::::::::::::::::.:::::.::::.:::.:::::::::::::::::: gi|120 NNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.::::::::::.::::::::::::::::::::::.:.:::::::::::: gi|120 SENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.:: .::::::::::::::::::::::::::::::::::::::::::::: gi|120 HGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::::: ::. ::::::..::::::::::: gi|120 LKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE 350 360 370 380 390 400 >>gi|74733151|sp|Q9BTV4.1|TMM43_HUMAN RecName: Full=Tran (400 aa) initn: 2482 init1: 2482 opt: 2482 Z-score: 2976.1 bits: 559.6 E(): 4.6e-157 Smith-Waterman score: 2482; 93.000% identity (98.000% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::: . ::::::::::::::::::::.::::: gi|747 MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::::::.:::::::::::.::.:::::::: gi|747 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::: ::::::::::::::.:::::.::::.:::.:::::::::::::::::: gi|747 KNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.::::::::::.::::::::::::::::::::::.:.:::::::::::: gi|747 SENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.:: .::::::::::::::::::::::::::::::::::::::::::::: gi|747 HGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::::: ::. ::::::..::::::::::: gi|747 LKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE 350 360 370 380 390 400 >>gi|151556045|gb|AAI49965.1| TMEM43 protein [Bos taurus (400 aa) initn: 2475 init1: 2475 opt: 2475 Z-score: 2967.7 bits: 558.0 E(): 1.4e-156 Smith-Waterman score: 2475; 93.000% identity (98.000% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::..:.::..:.. :::::::::::::::::::::::.:: gi|151 MAANYSSTSNKKDHVRITNKSQPGFLERLSETSGGMFVGLMTFLVSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::.:::.:::::::::::.:::::::::::::::: gi|151 YLIFTNEGRALKTATSLAEGLSLVVSPSSIHTVAPENEGRLVHVIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::: : :::::::::::::::::::::::: gi|151 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKTERKYSYNTEWRSEIVNSRNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::::::::::::::::::::::::.::::.:::.::::::::::::::.::: gi|151 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKVDNFKTLSLSKLEDPHVDIIRRGDYFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.:::::::::::::::::::::::::::::::::.:::::::::::::: gi|151 SENPKYPEVGDLRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLVPYSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::::::::::.:::::::::: :::::::::::::::::::::::::::::: gi|151 HGDFSAEEVFRREQKSNSLKTWGLRAAGWAAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE .:::::::::::::::::::::::::::: :. ::::::::::::::::::: gi|151 VKAFAFCVATSLTLLTVAAGWLFYRPLWALGIAGLALVPIIIARTRVPAKKLE 350 360 370 380 390 400 >>gi|22760828|dbj|BAC11350.1| unnamed protein product [H (400 aa) initn: 2473 init1: 2473 opt: 2473 Z-score: 2965.3 bits: 557.6 E(): 1.8e-156 Smith-Waterman score: 2473; 92.750% identity (97.750% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::: . ::::::::::::::::::::.::::: gi|227 MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|227 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::::::.:::::::::::.::.:::::::: gi|227 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH ::::::::::: ::::::::::::::.: :::.::::.:::.:::::::::::::::::: gi|227 KNPSAMAVESFMATAPFVQIGRFFLSSGPIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.::::::::::.::::::::::::::::::::::.:.:::::::::::: gi|227 SENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.:: .::::::::::::::::::::::::::::::::::::::::::::: gi|227 HGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE ::::::::::::::::::::::::::::: ::. ::::::..::::::::::: gi|227 LKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE 350 360 370 380 390 400 >>gi|109097987|ref|XP_001090994.1| PREDICTED: similar to (400 aa) initn: 2472 init1: 2472 opt: 2472 Z-score: 2964.1 bits: 557.4 E(): 2.2e-156 Smith-Waterman score: 2472; 93.000% identity (97.500% similar) in 400 aa overlap (14-413:1-400) 10 20 30 40 50 60 mFLJ00 RNRARRRQRTKPTMAANYSSTSSRKEHVKVTSEPQPGFLERLSETSGGMFVGLMTFLLSF :::::::::.:.::::::. ::::::::::::::: :::::::::: gi|109 MAANYSSTSTRREHVKVTTGSQPGFLERLSETSGGMVVGLMTFLLSF 10 20 30 40 70 80 90 100 110 120 mFLJ00 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 VHLPAVKLRRHVEMYQWVETEESSEYTEDGQVKKETKYSYNTEWRSEIVNSRNFDREIGH ::::::::::::::::::::::: ::::::::::::.:::::::::::.::.:::::::: gi|109 VHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 KNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKALSLAKLEDPHVDIIRRGDFFYH :::::::::::::::::::::::::: :::::.:::: :::.:::::::::::::::::: gi|109 KNPSAMAVESFTATAPFVQIGRFFLSPGLIDKVDNFKPLSLSKLEDPHVDIIRRGDFFYH 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 SENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYSTKSGDTLLLLH :::::::::::.:.::::::::::::::::::.::::::::::::.:.:::::::::::: gi|109 SENPKYPEVGDLRISFSYAGLSSDDPDLGPAHMVTVIARQRGDQLVPFSTKSGDTLLLLH 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 HGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG ::::::::::.:: .::::::::::::::::::::::::::::::::::::::::::::: gi|109 HGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIG 290 300 310 320 330 340 370 380 390 400 410 mFLJ00 LKAFAFCVATSLTLLTVAAGWLFYRPLWAALIGCLALVPIIIARTRVPAKKLE :::::::.::::::::::::::::::::: ::. :::::::.::::: ::::: gi|109 LKAFAFCMATSLTLLTVAAGWLFYRPLWALLIAGLALVPIIVARTRVSAKKLE 350 360 370 380 390 400 413 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 19:26:34 2009 done: Thu Mar 12 19:33:07 2009 Total Scan time: 889.670 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]