# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph01717.fasta.nr -Q ../query/mKIAA1185.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1185, 521 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7908791 sequences Expectation_n fit: rho(ln(x))= 5.6309+/-0.000192; mu= 10.4785+/- 0.011 mean_var=91.3410+/-17.592, 0's: 37 Z-trim: 105 B-trim: 251 in 1/64 Lambda= 0.134197 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81908912|sp|Q505F5.1|LRC47_MOUSE RecName: Full= ( 581) 3413 670.8 2.7e-190 gi|74191931|dbj|BAE32909.1| unnamed protein produc ( 581) 3405 669.3 8e-190 gi|208609970|ref|NP_001129138.1| leucine rich repe ( 580) 3271 643.4 5.1e-182 gi|149253441|ref|XP_001475204.1| PREDICTED: simila ( 580) 3231 635.6 1.1e-179 gi|148683005|gb|EDL14952.1| leucine rich repeat co ( 464) 3033 597.2 3.2e-168 gi|74750895|sp|Q8N1G4.1|LRC47_HUMAN RecName: Full= ( 583) 2969 584.9 2.1e-164 gi|149024755|gb|EDL81252.1| leucine rich repeat co ( 558) 2930 577.3 3.7e-162 gi|73956691|ref|XP_546742.2| PREDICTED: similar to ( 589) 2812 554.5 2.9e-155 gi|151557045|gb|AAI50060.1| LRRC47 protein [Bos ta ( 581) 2791 550.4 4.9e-154 gi|194208126|ref|XP_001915393.1| PREDICTED: leucin ( 518) 2554 504.5 2.9e-140 gi|126329506|ref|XP_001376729.1| PREDICTED: simila ( 581) 2488 491.8 2.2e-136 gi|118100978|ref|XP_417543.2| PREDICTED: similar t ( 575) 2132 422.8 1.2e-115 gi|171847334|gb|AAI61789.1| LOC100145802 protein [ ( 570) 1986 394.6 3.9e-107 gi|33416646|gb|AAH55992.1| MGC68895 protein [Xenop ( 566) 1855 369.2 1.7e-99 gi|159155895|gb|AAI54502.1| Si:ch211-147a11.7 prot ( 565) 1718 342.7 1.6e-91 gi|169145669|emb|CAQ13962.1| novel protein [Danio ( 574) 1716 342.3 2.2e-91 gi|126631489|gb|AAI33857.1| Si:ch211-147a11.7 prot ( 541) 1715 342.1 2.4e-91 gi|62531098|gb|AAH93410.1| Si:ch211-147a11.7 prote ( 448) 1635 326.5 9.4e-87 gi|47222796|emb|CAG01763.1| unnamed protein produc ( 553) 1616 322.9 1.4e-85 gi|224079656|ref|XP_002192665.1| PREDICTED: hypoth ( 402) 1577 315.3 2.1e-83 gi|12850904|dbj|BAB28889.1| unnamed protein produc ( 244) 1572 314.1 2.8e-83 gi|149492983|ref|XP_001513380.1| PREDICTED: simila ( 243) 1177 237.6 2.9e-60 gi|189522468|ref|XP_001336134.2| PREDICTED: simila ( 262) 1074 217.7 3.1e-54 gi|210128002|gb|EEA75682.1| hypothetical protein B ( 535) 1031 209.7 1.7e-51 gi|198427272|ref|XP_002131295.1| PREDICTED: simila ( 568) 1019 207.3 9e-51 gi|210090926|gb|EEA39190.1| hypothetical protein B ( 537) 995 202.7 2.1e-49 gi|215508938|gb|EEC18391.1| phenylalanyl-tRNA synt ( 540) 921 188.4 4.4e-45 gi|156545868|ref|XP_001606500.1| PREDICTED: hypoth ( 529) 912 186.6 1.5e-44 gi|115803082|ref|XP_780852.2| PREDICTED: hypotheti ( 471) 905 185.2 3.4e-44 gi|110748945|ref|XP_394881.3| PREDICTED: similar t ( 490) 781 161.2 5.9e-37 gi|212510584|gb|EEB13734.1| phenylalanyl-tRNA synt ( 518) 765 158.1 5.3e-36 gi|156222713|gb|EDO43554.1| predicted protein [Nem ( 522) 675 140.7 9.4e-31 gi|221114089|ref|XP_002160928.1| PREDICTED: simila ( 511) 651 136.1 2.3e-29 gi|149538992|ref|XP_001513210.1| PREDICTED: simila ( 144) 625 130.6 2.9e-28 gi|7332076|gb|AAF60763.1| Hypothetical protein Y54 ( 507) 630 132.0 3.9e-28 gi|91084651|ref|XP_967087.1| PREDICTED: similar to ( 504) 625 131.0 7.5e-28 gi|167867483|gb|EDS30866.1| leucine-rich repeat-co ( 539) 604 127.0 1.3e-26 gi|167867655|gb|EDS31038.1| leucine-rich repeat-co ( 539) 602 126.6 1.7e-26 gi|157014670|gb|EAA12930.4| AGAP011472-PA [Anophel ( 566) 584 123.1 2e-25 gi|108868628|gb|EAT32853.1| LAP4 protein, putative ( 494) 580 122.3 3.1e-25 gi|187036324|emb|CAP24930.1| Hypothetical protein ( 507) 575 121.3 6.2e-25 gi|190586903|gb|EDV26956.1| hypothetical protein T ( 526) 523 111.3 6.8e-22 gi|108878196|gb|EAT42421.1| conserved hypothetical ( 533) 502 107.2 1.2e-20 gi|149574612|ref|XP_001511110.1| PREDICTED: simila ( 212) 448 96.5 8.1e-18 gi|163774613|gb|EDQ88240.1| predicted protein [Mon ( 938) 354 78.8 7.5e-12 gi|220976074|gb|EED94402.1| phenylalanyl-trna synt ( 620) 339 75.7 4.1e-11 gi|158591770|gb|EDP30373.1| Leucine Rich Repeat fa ( 439) 330 73.9 1.1e-10 gi|160703419|gb|EAT80962.2| hypothetical protein S ( 614) 314 70.9 1.2e-09 gi|217407944|gb|EEC47879.1| predicted protein [Pha ( 640) 313 70.7 1.4e-09 gi|221131038|ref|XP_002156530.1| PREDICTED: simila ( 248) 284 64.8 3.3e-08 >>gi|81908912|sp|Q505F5.1|LRC47_MOUSE RecName: Full=Leuc (581 aa) initn: 3413 init1: 3413 opt: 3413 Z-score: 3572.6 bits: 670.8 E(): 2.7e-190 Smith-Waterman score: 3413; 99.808% identity (100.000% similar) in 521 aa overlap (1-521:61-581) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|819 PGLEERVKAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK 220 230 240 250 260 270 220 230 240 250 260 270 mKIAA1 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD 280 290 300 310 320 330 280 290 300 310 320 330 mKIAA1 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 340 350 360 370 380 390 340 350 360 370 380 390 mKIAA1 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 400 410 420 430 440 450 400 410 420 430 440 450 mKIAA1 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|819 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAELSKSTS 460 470 480 490 500 510 460 470 480 490 500 510 mKIAA1 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL 520 530 540 550 560 570 520 mKIAA1 ITLPPHVTVVR ::::::::::: gi|819 ITLPPHVTVVR 580 >>gi|74191931|dbj|BAE32909.1| unnamed protein product [M (581 aa) initn: 3405 init1: 3405 opt: 3405 Z-score: 3564.3 bits: 669.3 E(): 8e-190 Smith-Waterman score: 3405; 99.616% identity (100.000% similar) in 521 aa overlap (1-521:61-581) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|741 PGLEERVKAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 160 170 180 190 200 210 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK 220 230 240 250 260 270 220 230 240 250 260 270 mKIAA1 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|741 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLYVSENPTPLTVRVSPEVKD 280 290 300 310 320 330 280 290 300 310 320 330 mKIAA1 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 340 350 360 370 380 390 340 350 360 370 380 390 mKIAA1 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 400 410 420 430 440 450 400 410 420 430 440 450 mKIAA1 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|741 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAELSKSTS 460 470 480 490 500 510 460 470 480 490 500 510 mKIAA1 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL 520 530 540 550 560 570 520 mKIAA1 ITLPPHVTVVR ::::::::::: gi|741 ITLPPHVTVVR 580 >>gi|208609970|ref|NP_001129138.1| leucine rich repeat c (580 aa) initn: 3271 init1: 3271 opt: 3271 Z-score: 3424.1 bits: 643.4 E(): 5.1e-182 Smith-Waterman score: 3271; 95.010% identity (99.040% similar) in 521 aa overlap (1-521:60-580) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|208 PGLEERVKAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD ::::::::::::::: ::.:: :::::::::::::::::::::::::::::::::::::: gi|208 ARCAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA1 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD ::::.::::::::.:.:::.::::::::::::::::::::::::::::::::::::::.: gi|208 GRQEGSEKEDRKKKRDRKQRRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVRD 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 VRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 330 340 350 360 370 380 340 350 360 370 380 390 mKIAA1 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 390 400 410 420 430 440 400 410 420 430 440 450 mKIAA1 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS ::::::::::::::::::::::.:::..::::::::.:::::::::::.:.::::.:::: gi|208 VDAEGDVISFPPITNSEKTKIKRTTCSVFLEVTSATSLQLCKDIMDSLVLKMAELNKSTS 450 460 470 480 490 500 460 470 480 490 500 510 mKIAA1 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL ::::::::::::.::. :::::::. .:::::::::::::::::::::::::::::.:: gi|208 ENKEEDMLSGTETDASHGLSDPNLNPRAGKDGQCPLVVEQVRVVDLEGSLKVVYPSKADL 510 520 530 540 550 560 520 mKIAA1 ITLPPHVTVVR .::::.::::: gi|208 VTLPPYVTVVR 570 580 >>gi|149253441|ref|XP_001475204.1| PREDICTED: similar to (580 aa) initn: 3255 init1: 3033 opt: 3231 Z-score: 3382.2 bits: 635.6 E(): 1.1e-179 Smith-Waterman score: 3231; 95.585% identity (95.777% similar) in 521 aa overlap (1-521:61-580) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|149 PGLEERVKAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL :::: . ::::::::::::::::::::::::::::::::: gi|149 PGLSXXXXXX-XXXXXXXXXXXXXXXXPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA1 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA1 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 330 340 350 360 370 380 340 350 360 370 380 390 mKIAA1 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 390 400 410 420 430 440 400 410 420 430 440 450 mKIAA1 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS 450 460 470 480 490 500 460 470 480 490 500 510 mKIAA1 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL 510 520 530 540 550 560 520 mKIAA1 ITLPPHVTVVR ::::::::::: gi|149 ITLPPHVTVVR 570 580 >>gi|148683005|gb|EDL14952.1| leucine rich repeat contai (464 aa) initn: 3033 init1: 3033 opt: 3033 Z-score: 3176.4 bits: 597.2 E(): 3.2e-168 Smith-Waterman score: 3033; 100.000% identity (100.000% similar) in 464 aa overlap (58-521:1-464) 30 40 50 60 70 80 mKIAA1 ALGPGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELP :::::::::::::::::::::::::::::: gi|148 PGEGLGPAEPPGLPQLQSLNLSGNRLRELP 10 20 30 90 100 110 120 130 140 mKIAA1 ADLARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ADLARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLK 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 TLDLSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLDLSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 RSKGRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSKGRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPE 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 VKDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VKDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLL 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 YAARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YAARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENY 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 PCLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PCLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSK 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 STSENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 STSENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSK 400 410 420 430 440 450 510 520 mKIAA1 TDLITLPPHVTVVR :::::::::::::: gi|148 TDLITLPPHVTVVR 460 >>gi|74750895|sp|Q8N1G4.1|LRC47_HUMAN RecName: Full=Leuc (583 aa) initn: 1595 init1: 1358 opt: 2969 Z-score: 3108.1 bits: 584.9 E(): 2.1e-164 Smith-Waterman score: 2969; 86.286% identity (95.429% similar) in 525 aa overlap (1-521:59-583) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|747 PGLEERVRAAGGQLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL ::::::::::::::::::::::::.::::.:::::::::::::::::::::::::::::: gi|747 PGLSPELGPLPALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQSLNLSGNRLRELPADL 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD ::::::::::::::: ::.:: :::::::::::::::::::::::::::::::::::::: gi|747 ARCAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 150 160 170 180 190 200 160 170 180 190 200 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RS ::::::.::::::::::::::::::::.::::::::::.::::.:::::::.::::: .. gi|747 LSNNQLSEIPAELADCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKG 210 220 230 240 250 260 210 220 230 240 250 260 mKIAA1 KGRQEASEKED-RKKRRERKQHRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPE ::: :.::::. :.:::::::.::.:.:::. :.:..::.:.::::::::.::::::::: gi|747 KGRAEGSEKEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPE 270 280 290 300 310 320 270 280 290 300 310 320 mKIAA1 VKDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLL :.:::::::::.::::::::::::.:::.::::::.::::::::::.:::.:.::.:::: gi|747 VRDVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLL 330 340 350 360 370 380 330 340 350 360 370 380 mKIAA1 YAARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENY : ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|747 YCARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENY 390 400 410 420 430 440 390 400 410 420 430 440 mKIAA1 PCLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSK ::::::.::::::::::::::::.:::: .:::::::::.::.:::.::.:::.:::..: gi|747 PCLVDADGDVISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKK 450 460 470 480 490 500 450 460 470 480 490 500 mKIAA1 STSENKEEDMLSGTEADAGCG-LSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPS : ::::: :: ::::: : : ::. . :.:::: ::::::::::::::::::::: gi|747 YTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPS 510 520 530 540 550 560 510 520 mKIAA1 KTDLITLPPHVTVVR :.:: : :::::::: gi|747 KADLATAPPHVTVVR 570 580 >>gi|149024755|gb|EDL81252.1| leucine rich repeat contai (558 aa) initn: 2895 init1: 2895 opt: 2930 Z-score: 3067.5 bits: 577.3 E(): 3.7e-162 Smith-Waterman score: 3077; 90.787% identity (94.818% similar) in 521 aa overlap (1-521:60-558) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::::::::::::::::::::::::::: gi|149 PGLEERVKAAGGRLPPRLFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL ::::: ::::::::::::::::::::::::::::::::: gi|149 PGLSP----------------------PGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL 90 100 110 120 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD ::::::::::::::: ::.:: :::::::::::::::::::::::::::::::::::::: gi|149 ARCAPRLQSLNLTGNCLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 GRQEASEKEDRKKRRERKQHRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVKD ::::.::::::::.:.:::.::::::::::::::::::::::::::::::::::::::.: gi|149 GRQEGSEKEDRKKKRDRKQRRESGEGEEEVADSARLMLKVLHVSENPTPLTVRVSPEVRD 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKSTS ::::::::::::::::::::::.:::..::::::::.:::::::::::.:.::::.:::: gi|149 VDAEGDVISFPPITNSEKTKIKRTTCSVFLEVTSATSLQLCKDIMDSLVLKMAELNKSTS 430 440 450 460 470 480 460 470 480 490 500 510 mKIAA1 ENKEEDMLSGTEADAGCGLSDPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSKTDL ::::::::::::.::. :::::::. .:::::::::::::::::::::::::::::.:: gi|149 ENKEEDMLSGTETDASHGLSDPNLNPRAGKDGQCPLVVEQVRVVDLEGSLKVVYPSKADL 490 500 510 520 530 540 520 mKIAA1 ITLPPHVTVVR .::::.::::: gi|149 VTLPPYVTVVR 550 >>gi|73956691|ref|XP_546742.2| PREDICTED: similar to Y54 (589 aa) initn: 1644 init1: 1329 opt: 2812 Z-score: 2943.7 bits: 554.5 E(): 2.9e-155 Smith-Waterman score: 2812; 80.916% identity (92.748% similar) in 524 aa overlap (1-521:66-589) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::: ::::::::::::::::::::::: gi|739 PGLEQRVREAGGRLPPRLFTLPLLHYLEVSGCGSLREPGPGLAQGLPQLHSLVLRRNALG 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL ::::::::::::::::::::::::.::::.:::::::::::::::::::::::::::::: gi|739 PGLSPELGPLPALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQSLNLSGNRLRELPADL 100 110 120 130 140 150 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD :::::::.:::::::::.:: ::::::::::::::::::::::::::.:::.:::::: gi|739 PRCAPRLQTLNLTGNRLDSFPAALFRPGALPLLSELAAADNCLRELSPDVAHLTSLKTLD 160 170 180 190 200 210 160 170 180 190 200 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGG-RS ::::::.:.::::::::::::.:::::.: :.:::::: ::::::::::::.::::: :. gi|739 LSNNQLSEVPAELADCPKLKEVNFRGNKLTDRRLEKMVHGCQTKSILEYLRSGGRGGGRG 220 230 240 250 260 270 210 220 230 240 250 260 mKIAA1 KGRQEASEKEDRKKRRERKQHRESGEGEEE-VADSARLMLKVLHVSENPTPLTVRVSPEV ::: .. :::. ..::.....::::::::: :....::.:.:::::::::::::.:. : gi|739 KGRTDGPEKEEARRRRRERRRRESGEGEEEEVGSTSRLLLRVLHVSENPTPLTVHVNAAV 280 290 300 310 320 330 270 280 290 300 310 320 mKIAA1 KDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLY :::::.::::.::::::: ::::::::.::::::.:.::::::::::::::.::::::.: gi|739 KDVRPFIVGAVVRGMDLQAGNALRRFLTSQTKLHEDICEKRTAATIATHDLRAVRGPLVY 340 350 360 370 380 390 330 340 350 360 370 380 mKIAA1 AARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYP .::::.:::::::::::.:::.:::::::::::.:::::::.:::::::::::::::::: gi|739 TARPPQDLKIVPLGRKEVKAKDLVRQLQLEAEEHRKQKKRQNVSGLHRYLHLLDGKENYP 400 410 420 430 440 450 390 400 410 420 430 440 mKIAA1 CLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKS :::::.::::::::::::::::::::: .:::::::::.:: ::.:::.:.:.:::..: gi|739 CLVDADGDVISFPPITNSEKTKIKKTTSDLFLEVTSATSLQTCKEIMDALVLKMAEINKY 460 470 480 490 500 510 450 460 470 480 490 500 mKIAA1 TSENKEEDMLSGTEADAGCGLS-DPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSK : ::::. :: :::: : :. . :. :::. :::::::::.: .: :.:::::: gi|739 TLENKEDGSLSDPEADAVSGPPLGPSTSPSAEKDGSAPLVVEQVRVLDEDGHLRVVYPSK 520 530 540 550 560 570 510 520 mKIAA1 TDLITLPPHVTVVR ::: :::::.: gi|739 TDLGCAAPHVTVIR 580 >>gi|151557045|gb|AAI50060.1| LRRC47 protein [Bos taurus (581 aa) initn: 2732 init1: 2565 opt: 2791 Z-score: 2921.8 bits: 550.4 E(): 4.9e-154 Smith-Waterman score: 2791; 81.679% identity (92.176% similar) in 524 aa overlap (1-521:60-581) 10 20 30 mKIAA1 GCGSLRAPGPGLAQGLPQLHSLVLRRNALG :::::: ::::::::::::::::::::::: gi|151 PGLEERVRAAGGRLPPRLFTLPLLHYLEVSGCGSLREPGPGLAQGLPQLHSLVLRRNALG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA1 PGLSPELGPLPALRVLDLSGNALETLPPGEGLGPAEPPGLPQLQSLNLSGNRLRELPADL ::::::::::::::::::::::::.::::.:::::::::::::::::::::::::::::: gi|151 PGLSPELGPLPALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQSLNLSGNRLRELPADL 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA1 ARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLD ::::::::.:::::::::::: :: :::::::::::::::::::::::::::::::::: gi|151 ARCAPRLQTLNLTGNRLDAFPAALFLPGALPLLSELAAADNCLRELSPDIAHLASLKTLD 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA1 LSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLEKMVGGCQTKSILEYLRAGGRGGRSK ::::::.:::::::::::::.:::::::::::::::::.::::.:::::::::::: : . gi|151 LSNNQLSEIPAELADCPKLKDINFRGNRLRDKRLEKMVSGCQTRSILEYLRAGGRG-RCR 210 220 230 240 250 260 220 230 240 250 260 mKIAA1 GRQEASEKED-RKKRRERKQHRESGEGEEEVADSA-RLMLKVLHVSENPTPLTVRVSPEV :. :. .::. :.::::::. :::::: . :.: : ::.:.:::::::: ::::.:::: gi|151 GKAEGPDKEEGRRKRRERKK-RESGEGADAVVDEASRLLLRVLHVSENPFLLTVRASPEV 270 280 290 300 310 320 270 280 290 300 310 320 mKIAA1 KDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLY .::::..:::.::::::.:::::.:::. :::::.:::::::.:::::::: :::::::: gi|151 RDVRPFFVGAVVRGMDLRPGNALKRFLSCQTKLHEDLCEKRTVATIATHDLGAVRGPLLY 330 340 350 360 370 380 330 340 350 360 370 380 mKIAA1 AARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYP :::::.:.::.::::.:.:::.:::::::::::.:::::::.:::::::::::::::.:: gi|151 AARPPQDFKIIPLGRREVKAKDLVRQLQLEAEEHRKQKKRQNVSGLHRYLHLLDGKEHYP 390 400 410 420 430 440 390 400 410 420 430 440 mKIAA1 CLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATNLQLCKDIMDSLILRMAELSKS :::::.::::::::::::::::::::: .::::::::..::.::::::.:::.:::..: gi|151 CLVDADGDVISFPPITNSEKTKIKKTTSDLFLEVTSAASLQICKDIMDALILKMAEINKY 450 460 470 480 490 500 450 460 470 480 490 500 mKIAA1 TSENKEEDMLSGTEADAGCGLS-DPNLTLSSGKDGQCPLVVEQVRVVDLEGSLKVVYPSK : ::.::. :: :.:: :: . ::. : .. :. ::::::::::: :: :::::::: gi|151 TLENREESSLSDPESDAVCGHGLDPKATPGAEVTGSTPLVVEQVRVVDEEGHLKVVYPSK 510 520 530 540 550 560 510 520 mKIAA1 TDLITLPPHVTVVR :: ::::.: gi|151 MDLDFAAAHVTVLR 570 580 >>gi|194208126|ref|XP_001915393.1| PREDICTED: leucine ri (518 aa) initn: 1432 init1: 1284 opt: 2554 Z-score: 2674.5 bits: 504.5 E(): 2.9e-140 Smith-Waterman score: 2554; 80.652% identity (92.872% similar) in 491 aa overlap (36-521:29-518) 10 20 30 40 50 60 mKIAA1 RAPGPGLAQGLPQLHSLVLRRNALGPGLSPELGPLPALRVLDLSGNALETLPPGEGLGPA : :::::::::::::::::.::::.::::: gi|194 MLEDLPVPSPPAGTVCSAICSLPLLAGQEGGPLPALRVLDLSGNALEALPPGQGLGPA 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 EPPGLPQLQSLNLSGNRLRELPADLARCAPRLQSLNLTGNRLDAFPPELFRPGALPLLSE .::::::::::::::::::::::::::::::::.:::::: ::.:: :::::::::::: gi|194 DPPGLPQLQSLNLSGNRLRELPADLARCAPRLQTLNLTGNCLDSFPAALFRPGALPLLSE 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LAAADNCLRELSPDIAHLASLKTLDLSNNQLTEIPAELADCPKLKEINFRGNRLRDKRLE :::::::::::::::::::::::::::::::.::::::::::::::::::::.:.:.::: gi|194 LAAADNCLRELSPDIAHLASLKTLDLSNNQLSEIPAELADCPKLKEINFRGNKLKDRRLE 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 KMVGGCQTKSILEYLRAGGRGG-RSKGRQEASEKED-RKKRRERKQHRESGEGEEEVADS :::.::::.:::::::.::::: :.::. :. :::. :..:::::. .::::. :: ::. gi|194 KMVSGCQTRSILEYLRVGGRGGGRGKGKAEGPEKEEGRRRRRERKK-KESGEAGEEDADG 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 A-RLMLKVLHVSENPTPLTVRVSPEVKDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLH : ::.:.::::::.:.::::::::::.::::..:::.::::::. :.::.:::.:::::: gi|194 AGRLLLRVLHVSESPAPLTVRVSPEVRDVRPFLVGAVVRGMDLHAGSALKRFLTSQTKLH 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DDLCEKRTAATIATHDLQAVRGPLLYAARPPEDLKIVPLGRKEAKAKELVRQLQLEAEEQ .::::::::::::::::.::::::::..:::.::::.::::.:.:::.:::::: ::::. gi|194 EDLCEKRTAATIATHDLSAVRGPLLYTTRPPQDLKIIPLGRREVKAKDLVRQLQQEAEEH 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 RKQKKRQSVSGLHRYLHLLDGKENYPCLVDAEGDVISFPPITNSEKTKIKKTTCNLFLEV :::::::.:::::::::::::::::::::::.::::::::::::::::::::: .::::: gi|194 RKQKKRQNVSGLHRYLHLLDGKENYPCLVDADGDVISFPPITNSEKTKIKKTTSDLFLEV 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 TSATNLQLCKDIMDSLILRMAELSKSTSENKEEDMLSGTEADAGCG-LSDPNLTLSSGKD ::::.::.::::::.:::.::::.: : ::::: :: ::::: : :. : . .. :: gi|194 TSATSLQICKDIMDALILKMAELNKYTLENKEEGSLSDTEADAISGQLAAPRTSSQAEKD 420 430 440 450 460 470 490 500 510 520 mKIAA1 GQCPLVVEQVRVVDLEGSLKVVYPSKTDLITLPP-HVTVVR .. ::::::::::: :: ::::::::::: :. ::::.: gi|194 AHSPLVVEQVRVVDEEGRLKVVYPSKTDLGTVAASHVTVIR 480 490 500 510 521 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:50:12 2009 done: Fri Mar 13 02:57:27 2009 Total Scan time: 970.960 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]