# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph01643.fasta.nr -Q ../query/mKIAA1869.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1869, 774 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7900846 sequences Expectation_n fit: rho(ln(x))= 6.1498+/-0.000202; mu= 9.9003+/- 0.011 mean_var=129.7707+/-24.428, 0's: 38 Z-trim: 97 B-trim: 0 in 0/65 Lambda= 0.112586 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|8134721|sp|Q9WTM3.1|SEM6C_MOUSE RecName: Full=S ( 931) 5410 890.6 0 gi|4521231|dbj|BAA76295.1| semaphorin Y short isof ( 928) 5268 867.5 0 gi|74145448|dbj|BAE36165.1| unnamed protein produc ( 777) 5190 854.8 0 gi|109016115|ref|XP_001104082.1| PREDICTED: semaph ( 930) 4660 768.8 0 gi|20532413|sp|Q9H3T2.3|SEM6C_HUMAN RecName: Full= ( 930) 4656 768.1 0 gi|55960948|emb|CAI16378.1| sema domain, transmemb ( 930) 4645 766.3 0 gi|12081909|dbj|BAB20670.1| semaphorin Y [Homo sap ( 930) 4641 765.7 0 gi|194036253|ref|XP_001929695.1| PREDICTED: simila ( 934) 4634 764.5 0 gi|114559366|ref|XP_001170564.1| PREDICTED: semaph ( 930) 3847 636.7 1.2e-179 gi|126313713|ref|XP_001366206.1| PREDICTED: simila ( 941) 3819 632.2 2.9e-178 gi|194210828|ref|XP_001916108.1| PREDICTED: simila ( 852) 3787 626.9 9.8e-177 gi|148706836|gb|EDL38783.1| sema domain, transmemb ( 858) 2971 494.4 7.8e-137 gi|14010605|gb|AAK52051.1|AF363973_1 semaphorin 6C ( 963) 2971 494.4 8.5e-137 gi|148706835|gb|EDL38782.1| sema domain, transmemb ( 968) 2971 494.4 8.5e-137 gi|8134706|sp|Q9WTL3.1|SEM6C_RAT RecName: Full=Sem ( 960) 2906 483.9 1.3e-133 gi|163781010|gb|ABY40786.1| sema domain, transmemb ( 962) 2783 463.9 1.3e-127 gi|169410916|gb|ACA57926.1| Sema domain, transmemb ( 962) 2781 463.6 1.7e-127 gi|109016112|ref|XP_001103998.1| PREDICTED: semaph ( 962) 2778 463.1 2.3e-127 gi|18462034|gb|AAL72100.1|AF339154_1 semaphorin Y ( 962) 2764 460.8 1.1e-126 gi|55960947|emb|CAI16377.1| sema domain, transmemb ( 962) 2753 459.0 3.9e-126 gi|114559364|ref|XP_001170541.1| PREDICTED: semaph ( 962) 2740 456.9 1.7e-125 gi|194380956|dbj|BAG64046.1| unnamed protein produ ( 683) 2737 456.3 1.9e-125 gi|217030846|gb|ACJ74008.1| Sema domain, transmemb ( 961) 2696 449.8 2.4e-123 gi|183637581|gb|ACC64583.1| Sema domain, transmemb ( 959) 2684 447.8 9.1e-123 gi|73981571|ref|XP_540309.2| PREDICTED: similar to (1045) 2599 434.1 1.4e-118 gi|3005748|gb|AAC09365.1| unknown [Homo sapiens] ( 446) 2564 428.0 4e-117 gi|19850865|gb|AAL99670.1|AF363972_1 semaphorin 6C ( 923) 2537 423.9 1.4e-115 gi|148706833|gb|EDL38780.1| sema domain, transmemb ( 923) 2537 423.9 1.4e-115 gi|19850863|gb|AAL99669.1|AF363971_1 semaphorin 6C ( 920) 2481 414.8 7.5e-113 gi|109016118|ref|XP_001103822.1| PREDICTED: semaph ( 922) 2353 394.0 1.4e-106 gi|119573856|gb|EAW53471.1| sema domain, transmemb ( 922) 2338 391.6 7.4e-106 gi|18462032|gb|AAL72099.1|AF339153_1 semaphorin Y ( 922) 2338 391.6 7.4e-106 gi|55960946|emb|CAI16376.1| sema domain, transmemb ( 922) 2327 389.8 2.5e-105 gi|114559370|ref|XP_001170512.1| PREDICTED: semaph ( 922) 2314 387.7 1.1e-104 gi|68534777|gb|AAH98887.1| Sema domain, transmembr ( 880) 1807 305.3 6.6e-80 gi|220672922|emb|CAX13645.1| sema domain, transmem ( 898) 1800 304.2 1.5e-79 gi|119902566|ref|XP_596649.3| PREDICTED: similar t (1011) 1783 301.5 1.1e-78 gi|109080995|ref|XP_001112381.1| PREDICTED: simila (1011) 1779 300.9 1.7e-78 gi|21634827|gb|AAM69453.1|AF389430_1 semaphorin 6D (1011) 1770 299.4 4.6e-78 gi|114656844|ref|XP_001164625.1| PREDICTED: semaph (1011) 1769 299.2 5.2e-78 gi|119902564|ref|XP_001249832.1| PREDICTED: simila (1017) 1764 298.4 9.2e-78 gi|73999992|ref|XP_861366.1| PREDICTED: similar to (1011) 1761 297.9 1.3e-77 gi|149691985|ref|XP_001502487.1| PREDICTED: sema d (1011) 1761 297.9 1.3e-77 gi|118095756|ref|XP_001231890.1| PREDICTED: simila (1022) 1760 297.8 1.4e-77 gi|118095760|ref|XP_001231947.1| PREDICTED: simila (1016) 1756 297.1 2.3e-77 gi|149023159|gb|EDL80053.1| sema domain, transmemb ( 990) 1754 296.8 2.8e-77 gi|114656842|ref|XP_001164699.1| PREDICTED: semaph (1017) 1751 296.3 4e-77 gi|109080993|ref|XP_001112343.1| PREDICTED: simila (1017) 1748 295.8 5.6e-77 gi|73999994|ref|XP_861397.1| PREDICTED: similar to (1017) 1744 295.2 8.7e-77 gi|21634823|gb|AAM69451.1|AF389428_1 semaphorin 6D (1017) 1743 295.0 9.8e-77 >>gi|8134721|sp|Q9WTM3.1|SEM6C_MOUSE RecName: Full=Semap (931 aa) initn: 5410 init1: 5410 opt: 5410 Z-score: 4753.5 bits: 890.6 E(): 0 Smith-Waterman score: 5410; 100.000% identity (100.000% similar) in 774 aa overlap (1-774:158-931) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL :::::::::::::::::::::::::::::: gi|813 VLVPWNSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSTVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK 850 860 870 880 890 900 760 770 mKIAA1 SPLSPKPPLASPPQPAPHGGHFNF :::::::::::::::::::::::: gi|813 SPLSPKPPLASPPQPAPHGGHFNF 910 920 930 >>gi|4521231|dbj|BAA76295.1| semaphorin Y short isoform (928 aa) initn: 3988 init1: 3956 opt: 5268 Z-score: 4628.8 bits: 867.5 E(): 0 Smith-Waterman score: 5268; 97.287% identity (98.966% similar) in 774 aa overlap (1-774:156-928) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL :::::::::::::::::::::::: ::::: gi|452 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSTVAISAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|452 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|452 SPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR :::::::::::::::::::::::::::::::::::: :::.::::::::::::::::::: gi|452 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGPEPIILEEIDAYSHARCSGKRSPR 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|452 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRFRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|452 NIRGPGGTDVDLTGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|452 PPKDGDAAQTPQLYTTFLPPPEGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::::::::: ::::.:::::::::::::::::::: :::::::::::::::::::::::: gi|452 NASEGPGRP-RGCSAAGGPAPRVLVRPPPPGCPGQEVEVTTLEELLRYLHGPQPPRKGSE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR ::::::::::::::::::.::::::::::: ::::::::::.:::::::::::::::::: gi|452 PLASAPFTSRPPASEPGAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPSGRPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::.:::::::::::::::::::::::::.::::::::::::::::.::::::::::::: gi|452 LGVSGSRRLPFPTHRAPPGLLTRVPSGGPSRYSGGPGRHLLYLGRPDGHRGRSLKRVDVK 850 860 870 880 890 900 760 770 mKIAA1 SPLSPKPPLASPPQPAPHGGHFNF ::::::::::.::::::::.:::: gi|452 SPLSPKPPLATPPQPAPHGSHFNF 910 920 >>gi|74145448|dbj|BAE36165.1| unnamed protein product [M (777 aa) initn: 5193 init1: 2682 opt: 5190 Z-score: 4561.3 bits: 854.8 E(): 0 Smith-Waterman score: 5190; 96.778% identity (97.294% similar) in 776 aa overlap (1-774:2-777) 10 20 30 40 50 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LQQEGEELSGQARCPFDATQSTVAIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAK 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 YDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDR 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 HWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFY 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA1 LDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLF 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA1 IKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA1 PGGQSLGSEPIVLEEIDAYSHARCSGKRSPRAARRIIGLELDTEGHRLFVAFPGCIVY-L ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|741 PGGQSLGSEPIVLEEIDAYSHARCSGKRSPRAARRIIGLELDTEGHRLFVAFPGCIVLPL 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA1 SLSRCARHGACQRSCLASLDPYCGWHRSRGCMSIRGP-GGTDVDLTGNQESTEHGDCQDG : : . . :::::::::::::::.: .: ::::::::::::::::::: gi|741 SQPVCPAMEHVRGAAWLLSDPYCGWHRSRGCMSIQGTWSGLDVDLTGNQESTEHGDCQDG 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA1 ATGSQSGPGDSAYGVRRDLSPASASRSIPIPLLLACVAAAFALGASVSGLLVSCACRRAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ATGSQSGPGDSAYGVRRDLSPASASRSIPIPLLLACVAAAFALGASVSGLLVSCACRRAN 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA1 RRRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAQTPQLYTTFLPPPDGGSPP :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|741 RRRSKDIETPGLPRPLSLRSLARLHGGGPEPPTPPKDGDAAQTPQLYTTFLPPPDGGSPP 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA1 ELACLPTPETTPELPVKHLRASGGPWEWNQNGNNASEGPGRPPRGCSGAGGPAPRVLVRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ELACLPTPETTPELPVKHLRASGGPWEWNQNGNNASEGPGRPPRGCSGAGGPAPRVLVRP 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA1 PPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSEPLASAPFTSRPPASEPGASLFVDSSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSEPLASAPFTSRPPASEPGASLFVDSSPM 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA1 PRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPRLGVGGSRRLPFPTHRAPPGLLTRVPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPRLGVGGSRRLPFPTHRAPPGLLTRVPSG 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA1 GPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVKSPLSPKPPLASPPQPAPHGGHFNF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVKSPLSPKPPLASPPQPAPHGGHFNF 730 740 750 760 770 >>gi|109016115|ref|XP_001104082.1| PREDICTED: semaphorin (930 aa) initn: 4314 init1: 3699 opt: 4660 Z-score: 4095.1 bits: 768.8 E(): 0 Smith-Waterman score: 4660; 86.778% identity (93.325% similar) in 779 aa overlap (1-774:157-930) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::.:::::: gi|109 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAVFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE :::::::::::::::::::::::::::::::::::::::::.:::::.:::::::::::: gi|109 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.:: gi|109 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::.:.:: ::::.::::::: :::::::::::::::::::::::::::::::: gi|109 SPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::: : ::.:::::::::::::::::.: : :::.:::::::: :::::::. . gi|109 AVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSGGPEPILLEEIDAYSPARCSGKRAAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::::::::::::::::::: :::::: ::::::::::::::::: ::::::: ::::. gi|109 TARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .:: ::::::: .::::: ::::::::::::::::::::::::::: :::::::.::::: gi|109 DIREPGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :: :::::::::::::::::::::::.:::.::::::::::::::::::::::::::::: gi|109 LASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN : :::::.:::::::::::::.: ::::.::::::.:::::::::::.: ::::::: : gi|109 PSKDGDAVQTPQLYTTFLPPPEGVPPPELTCLPTPESTPELPVKHLRAAGDPWEWNQNRN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::.::::: :: .:::::::::::::::::::::::::::::::::::::::::::.: gi|109 NAKEGPGRS-RGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE 730 740 750 760 770 780 640 650 660 670 680 mKIAA1 PLASAPFTSR--PPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPA : ::.::: :: ::. .:. :: .. .:::::::::::. :. .:::::::: gi|109 P--PAPLTSRVLPP--EPAPALLGCPSPRSHECAPPLRLDVPPEGRCASAPARPALSAPA 790 800 810 820 830 840 690 700 710 720 730 740 mKIAA1 PRLGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVD :::::::.::::: :::::.::::::::::.:::::::::::: :::::.:::.::::: gi|109 PRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGRHLLYPGRPEGYRGRALKRVD 850 860 870 880 890 900 750 760 770 mKIAA1 VKSP-LSPKPPLASPP--QPAPHGGHFNF :..: :::::::. : : .:.::.::: gi|109 VEKPQLSPKPPLVRPSSRQAVPNGGRFNF 910 920 930 >>gi|20532413|sp|Q9H3T2.3|SEM6C_HUMAN RecName: Full=Sema (930 aa) initn: 4274 init1: 3699 opt: 4656 Z-score: 4091.6 bits: 768.1 E(): 0 Smith-Waterman score: 4656; 86.873% identity (93.308% similar) in 777 aa overlap (1-774:157-930) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::::::::: gi|205 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|205 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|205 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.:: gi|205 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::.:: ::::.::::::: ::::::::::::::.::::::::::::::::: gi|205 SPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::: : ::.:::::::::::::::::.: : :::.:::::::: :::::::. . gi|205 AVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSGGPEPILLEEIDAYSPARCSGKRTAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::::::::::::::::::: :::::: ::::::::::::::::: ::::::: ::::. gi|205 TARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .::: :::::: .::::: ::::::::::::::::::::::::::: :::::::.::::: gi|205 DIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :: :::::::::::::::::::::::.:::.::::::::::::::::::::::::::::: gi|205 LASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN : :::::.:::::::::::::.: :::::::::::.:::::::::::.: ::::::: : gi|205 PSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::.::::: :: .:::::::::::::::::::::::::::::::::::::::::::.: gi|205 NAKEGPGRS-RGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR : ::.::: ::. .:. :: :.. . ::::::::::. :. .:::::::::: gi|205 P--PAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::::.::::: :::::.::::::::::.:::::::.::::::::::.:::.::::::. gi|205 LGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVE 850 860 870 880 890 900 760 770 mKIAA1 SP-LSPKPPLASPP--QPAPHGGHFNF .: :: ::::..: : .:.::.::: gi|205 KPQLSLKPPLVGPSSRQAVPNGGRFNF 910 920 930 >>gi|55960948|emb|CAI16378.1| sema domain, transmembrane (930 aa) initn: 4263 init1: 3688 opt: 4645 Z-score: 4081.9 bits: 766.3 E(): 0 Smith-Waterman score: 4645; 86.744% identity (93.179% similar) in 777 aa overlap (1-774:157-930) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::::::::: gi|559 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|559 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|559 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.:: gi|559 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::.:: ::::.::::::: ::::::::::::::.::::::::::::::::: gi|559 SPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::: : ::.::::::::::::: :::.: : :::.:::::::: :::::::. . gi|559 AVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCSGKRTAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::::::::::::::::::: :::::: ::::::::::::::::: ::::::: ::::. gi|559 TARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .::: :::::: .::::: ::::::::::::::::::::::::::: :::::::.::::: gi|559 DIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :: :::::::::::::::::::::::.:::.::::::::::::::::::::::::::::: gi|559 LASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN : :::::.:::::::::::::.: :::::::::::.:::::::::::.: ::::::: : gi|559 PSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::.::::: :: .:::::::::::::::::::::::::::::::::::::::::::.: gi|559 NAKEGPGRS-RGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR : ::.::: ::. .:. :: :.. . ::::::::::. :. .:::::::::: gi|559 P--PAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::::.::::: :::::.::::::::::.:::::::.::::::::::.:::.::::::. gi|559 LGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVE 850 860 870 880 890 900 760 770 mKIAA1 SP-LSPKPPLASPP--QPAPHGGHFNF .: :: ::::..: : .:.::.::: gi|559 KPQLSLKPPLVGPSSRQAVPNGGRFNF 910 920 930 >>gi|12081909|dbj|BAB20670.1| semaphorin Y [Homo sapiens (930 aa) initn: 4259 init1: 3684 opt: 4641 Z-score: 4078.4 bits: 765.7 E(): 0 Smith-Waterman score: 4641; 86.615% identity (93.179% similar) in 777 aa overlap (1-774:157-930) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::::::::: gi|120 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|120 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::.:::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|120 DARLGKVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.:: gi|120 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::.:: ::::.::::::: ::::::::::::::.::::::::::::::::: gi|120 SPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::: : ::.::::::::::::: :::.: : :::.:::::::: :::::::. . gi|120 AVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGGPEPILLEEIDAYSPARCSGKRTAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::::::::::::::::::: :::::: ::::::::::::::::: ::::::: ::::. gi|120 TARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .::: :::::: .::::: ::::::::::::::::::::::::::: :::::::.::::: gi|120 DIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :: :::::::::::::::::::::::.:::.::::::::::::::::::::::::::::: gi|120 LASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN : :::::.:::::::::::::.: :::::::::::.:::::::::::.: ::::::: : gi|120 PSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::.::::: :: .:::::::::::::::::::::::::::::::::::::::::::.: gi|120 NAKEGPGRS-RGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAE 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR : ::.::: ::. .:. :: :.. . ::::::::::. :. .:::::::::: gi|120 P--PAPLTSRALPPEPAPALLGGPSPRPHECASPLRLDVPPEGRCASAPARPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::::.::::: :::::.::::::::::.:::::::.::::::::::.:::.::::::. gi|120 LGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVE 850 860 870 880 890 900 760 770 mKIAA1 SP-LSPKPPLASPP--QPAPHGGHFNF .: :: ::::..: : .:.::.::: gi|120 KPQLSLKPPLVGPSSRQAVPNGGRFNF 910 920 930 >>gi|194036253|ref|XP_001929695.1| PREDICTED: similar to (934 aa) initn: 4254 init1: 3629 opt: 4634 Z-score: 4072.3 bits: 764.5 E(): 0 Smith-Waterman score: 4634; 85.623% identity (93.582% similar) in 779 aa overlap (1-774:157-934) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::.:::::: gi|194 VLVPWNSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSNVAVFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE :::::::::::::::::::::::::::::::::::::::::.:::::.:::::::::::: gi|194 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|194 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|194 VNLYGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::.:: : ::.::::::: :::::::::::::::::::::::::::::::: gi|194 SPRPGSCAGVGVAALFPSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::.::::::::::.:::::::::::::: . :::.:::::::: .::::::. . gi|194 AVDGMAGPYRNTTVLFLGSSDGTVLKVLPPGGQSGAHEPILLEEIDAYSPSRCSGKRAAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::.:::::::::::::::: :::.:: ::::::::::.:::::: :::::: ::::. gi|194 TARRVIGLELDTEGHRLFVAFSGCIIYLPLSRCARHGACRRSCLASQDPYCGWDSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .:::::::::: .:.::: : :::::::::::: :::.::::::: :::::::.::::: gi|194 DIRGPGGTDVDPAGKQESMEVDDCQDGATGSQSGTGDSTYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :::::::::.::::::::::::::::.:.::::::.:::::::::::::::::.:::::: gi|194 LACVAAAFAMGASVSGLLVSCACRRAHRHRSKDIESPGLPRPLSLRSLARLHGAGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN :::::..: ::::::::::::.: :::::::::::.:::::::::: ::::::::::: gi|194 PPKDGEGALTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRHPGGPWEWNQNGN 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE ::.:: :: :: ...::::::::::::::::::::::::::::::::::::::::: .: gi|194 NAKEGRGRT-RGGNATGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKEAE 730 740 750 760 770 780 640 650 660 670 680 mKIAA1 PLASAPFTSR--PPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPA : :.:::::: :: :. .::. : .::: .:: ::::::::: ::..:::::::: gi|194 PPAAAPFTSRALPPEPTPSPTLFAGSCLLPRDCAPPRRLDVPPEGKGPAPAARPALSAPA 790 800 810 820 830 840 690 700 710 720 730 740 mKIAA1 PRLGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVD ::::::::::::: ::::::.::::::::::.::::: :.::::::::.:.:::.::::: gi|194 PRLGVGGSRRLPFSTHRAPPALLTRVPSGGPSRYSGGAGKHLLYLGRPDGYRGRALKRVD 850 860 870 880 890 900 750 760 770 mKIAA1 VKSPLSP-KPPLASPP--QPAPHGGHFNF :.. .: ::::..:: : .:.:.:::: gi|194 VEKSQGPSKPPLVGPPSQQVVPNGSHFNF 910 920 930 >>gi|114559366|ref|XP_001170564.1| PREDICTED: semaphorin (930 aa) initn: 3992 init1: 3379 opt: 3847 Z-score: 3381.4 bits: 636.7 E(): 1.2e-179 Smith-Waterman score: 3847; 75.032% identity (81.467% similar) in 777 aa overlap (1-774:157-930) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::::::::: gi|114 VLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE ::::::::::::::::::::::::::::::::::::::::: :::::.:::::::::::: gi|114 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVQALEHGDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|114 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.:: gi|114 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV :::::::::::.:: ::::.::::::: ::::::::::::::.::::::::::::::::: gi|114 SPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR ::::::::: : ::.:::::::::::::::::.: : :::.:::::::: :::::::. . gi|114 AVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSGGPEPILLEEIDAYSPARCSGKRTAQ 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM .:::::::::::::::::::: :::::: ::::::::::::::::: ::::::: ::::. gi|114 TARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHSSRGCV 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL .::: :::::: .::::: ::::::::::::::::::::::::::: :::::::.::::: gi|114 DIRGSGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYGVRRDLPPASASRSVPIPLL 550 560 570 580 590 600 460 470 480 490 500 510 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPP :: :::::::::::::::::::::::.:::.::::::::::::::::::::::::::::: gi|114 LASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 610 620 630 640 650 660 520 530 540 550 560 570 mKIAA1 PPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGN : :: ::.:::::::::::::.: . .. gi|114 PSKDRDAVQTPQLYTTFLPPPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXX 670 680 690 700 710 720 580 590 600 610 620 630 mKIAA1 NASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSE .. gi|114 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 730 740 750 760 770 780 640 650 660 670 680 690 mKIAA1 PLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALSAPAPR . . .:. :: :.. .:::::::::::. :. .:::::::::: gi|114 XXXXXXXXXXXXXXXXAPALLGGPSPRPHECAPPLRLDVPPEGSCASAPARPALSAPAPR 790 800 810 820 830 840 700 710 720 730 740 750 mKIAA1 LGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRSLKRVDVK :::::.::::: :::::.::::::::::.:::::::.::::::::::.:::.::::::. gi|114 LGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVE 850 860 870 880 890 900 760 770 mKIAA1 SP-LSPKPPLASPP--QPAPHGGHFNF .: :: ::::..: : .:.::.::: gi|114 KPQLSLKPPLVGPSSRQAVPNGGRFNF 910 920 930 >>gi|126313713|ref|XP_001366206.1| PREDICTED: similar to (941 aa) initn: 3562 init1: 2672 opt: 3819 Z-score: 3356.8 bits: 632.2 E(): 2.9e-178 Smith-Waterman score: 4041; 74.684% identity (86.582% similar) in 790 aa overlap (1-774:157-941) 10 20 30 mKIAA1 QQEGEELSGQARCPFDATQSTVAIFAEGSL ::::::::::::::::::::.::::::::: gi|126 VLVPRDSRTLLACGTNSFSPMCRSYGISSLQQEGEELSGQARCPFDATQSSVAIFAEGSL 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA1 YSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFREVSVE ::::::::::::::::::.::::::::::::::::::::::.:.:: .:::::::::::: gi|126 YSATAADFQASDAVVYRSFGPQPPLRSAKYDSKWLREPHFVHAVEHRDHVYFFFREVSVE 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA1 DARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGP :::::::::::::::::::.:::::::::::::::::::::::::::.:::::::.:::: gi|126 DARLGRVQFSRVARVCKRDIGGSPRALDRHWTSFLKLRLNCSVPGDSAFYFDVLQALTGP 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA1 VNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVP . :::: ::::::::::::::::::::::.:::::::::::::::: ::::::: ::.:: gi|126 TPLHGRPALFGVFTTQTNSIPGSAVCAFYMDDIERGFEGKFKEQRSPDGAWTPVPEDRVP 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA1 SPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRALLTQV ::::::::::: :::: ::.::::.:: ::::::::::.:::::: :..: .::::::: gi|126 SPRPGSCAGVGRAASFPSSRDLPDEVLTFIKAHPLLDPVVPPATHGPFFTRIGRALLTQV 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA1 AVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARCSGKRSPR :::: :: : ::::::::..:::::::::::. . ..::..:::::.:: .::.:::: . gi|126 AVDGAAGRHGNTTVLFLGTEDGTVLKVLPPGSGNGNTEPVLLEEIDTYSSSRCGGKRSAE 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA1 AARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHRSRGCM ::...:: .: ::::::::: ::.:.. ::::.::::::.::: : :::::: .::: gi|126 LARQVLGLVVDPEGHRLFVAFSGCVVHMPLSRCTRHGACQKSCLDSQDPYCGWGSFKGCM 490 500 510 520 530 540 400 410 420 430 440 450 mKIAA1 SIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASRSIPIPLL ..:: . .:.. :..: :.:::.::::::.::::::::::::: : ::. ...:.::: gi|126 DVRGYAWADLEQDGDREVMEEGDCHDGATGSHSGPGDSAYGVRRDPSHASSPHTVPVPLL 550 560 570 580 590 600 460 470 480 490 500 mKIAA1 LACVAAAFALGASVSGLLVSCACRRANR---RRSKDIETPGLPRPLSLRSLARLHGGGPE :: ::::::::::.::.:::::::.: : : .:::::::::::::::::::::::::. gi|126 LASVAAAFALGASISGFLVSCACRHAYRHGHRGNKDIETPGLPRPLSLRSLARLHGGGPD 610 620 630 640 650 660 510 520 530 540 550 560 mKIAA1 PPPPPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQ :: :.::. .:::::::::: .: ::::::::::.:::::::.:. .:::::. gi|126 PPAQAKEGDSPPVPQLYTTFLPPSEGMPAPELACLPTPESTPELPVKQLQPVQAPWEWNH 670 680 690 700 710 720 570 580 590 600 610 620 mKIAA1 NGNNASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRK :::::.:. .. : . ::::::::::::::::::::::::::::::::.::: :: gi|126 NGNNAKESSAHFRSGST----PAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHAPQPSRK 730 740 750 760 770 780 630 640 650 660 670 mKIAA1 GSE------PLASAPFTSR--P--PASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAA :.: : : ::..: : : ::. :: :::.::: .::::::.::::: gi|126 GTEVLSPTNPGPSLPFATRAQPCVPPLEPARPLFSGSSPLPRDCTPPLRLDIPPEGKCPP 790 800 810 820 830 840 680 690 700 710 720 730 mKIAA1 PSGRPALSAPAPRLGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPE :: :: ::::::::::::.: . ::.:::::::::::: .::::: ::. ::::::: gi|126 PS-RPLLSAPAPRLGVGGTRGISPSPHRVPPGLLTRVPSGGASRYSGGHGRYPLYLGRPE 850 860 870 880 890 900 740 750 760 770 mKIAA1 GHRGRSLKRVDVKSP-LSPKPPL--ASPPQPAPHGGHFNF :.:::.::::::..: : :: :. .:: : :: :::::. gi|126 GYRGRALKRVDVEKPQLPPKAPVLVSSPSQAAPPGGHFNY 910 920 930 940 774 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 05:19:43 2009 done: Mon Mar 16 05:28:05 2009 Total Scan time: 1102.180 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]