Comparison of KIAA cDNA sequences between mouse and human (FLJ00277)
<<Original sequence data>>
mouse mFLJ00277 (mph01638) length: 3112 bp, CDS: 36 - 641
human (sh01540) length: 5074 bp, CDS: 1 - 1074
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 43 - 79 19 15 44.1
CDS: 80 - 1083 463 145 23.8
3'UTR: 1084 - 5185 1598 811 33.7
amino acid
CDS: 80 - 1083 136 197 59.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
G S M
mph01638 1 ..........................................GGGAGCAT 8
| || ||
sh01540 1 GACATCCTCATGTCCAGCGTGAAGGGCCTGGCCGAGAACGAGGAGAACAA 50
D I L M S S V K G L A E N E E N K
51 ----+----*----+----*----+----*----+----*----+----* 100
G * V W S Q M R G K L G P R V
mph01638 9 GGGTTAGGTGAAGGTGGAGTCAGATGAGGGGCAAGCTGGGCCCCCGGGTG 58
||| | | | ||| | | || |||| ||| || | |||
sh01540 51 GGGCTTCCT....GCGGAATGTGGTGTCGGGCGAGCACTACCGCTTTGTG 96
G F L R N V V S G E H Y R F V
101 ----+----*----+----*----+----*----+----*----+----* 150
I G R G L S G R V A S P A P -
mph01638 59 .GGATAGGGAGGGGCCTGTCTGGCAGGGTAGCTTCTCCCGCCCCCA.... 103
| || ||| || | | | | | || | |||| ||
sh01540 97 AGCATGTGGATGGCGCGGACGTCCTACCTGGCCGCCTTCGCCATCATGGT 146
S M W M A R T S Y L A A F A I M V
151 ----+----*----+----*----+----*----+----*----+----* 200
mph01638 104 .................................................. 104
sh01540 147 CATCTTCACGCTGAGCGTGTCCATGCTGCTGCGGTACTCACACCACCAGA 196
I F T L S V S M L L R Y S H H Q I
201 ----+----*----+----*----+----*----+----*----+----* 250
mph01638 104 .................................................. 104
sh01540 197 TCTTCGTCTTCATCGTGGACCTGCTGCAGATGCTGGAGATGAACATGGCC 246
F V F I V D L L Q M L E M N M A
251 ----+----*----+----*----+----*----+----*----+----* 300
mph01638 104 .................................................. 104
sh01540 247 ATCGCCTTCCCCGCAGCGCCCCTGCTGACCGTCATCCTGGCCCTCGTCGG 296
I A F P A A P L L T V I L A L V G
301 ----+----*----+----*----+----*----+----*----+----* 350
mph01638 104 .................................................. 104
sh01540 297 GATGGAGGCCATCATGTCGGAGTTCTTCAACGACACCACCACCGCCTTCT 346
M E A I M S E F F N D T T T A F Y
351 ----+----*----+----*----+----*----+----*----+----* 400
mph01638 104 .................................................. 104
sh01540 347 ACATCATCCTCATCGTGTGGCTCGCGGACCAGTATGACGCCATCTGCTGC 396
I I L I V W L A D Q Y D A I C C
401 ----+----*----+----*----+----*----+----*----+----* 450
R F F Y L Y H
mph01638 104 .............................CAGGTTCTTCTACCTCTACCA 124
|||||||||| ||||||||
sh01540 397 CACACCAGCACCAGCAAGCGGCATTGGCTGCGGTTCTTCTATCTCTACCA 446
H T S T S K R H W L R F F Y L Y H
451 ----+----*----+----*----+----*----+----*----+----* 500
F A F Y A Y H Y R F N G Q Y S S L
mph01638 125 CTTCGCCTTCTATGCCTACCACTACCGCTTTAACGGGCAGTACAGCAGCC 174
|||||||||||||||||| ||||||||||| || |||||||| |||||||
sh01540 447 CTTCGCCTTCTATGCCTATCACTACCGCTTCAATGGGCAGTATAGCAGCC 496
F A F Y A Y H Y R F N G Q Y S S L
501 ----+----*----+----*----+----*----+----*----+----* 550
A L V T S W L F I Q H S M I Y F
mph01638 175 TGGCCCTGGTCACCTCCTGGCTCTTCATCCAGCATTCCATGATCTACTTC 224
||||||||||||||||||||||||||||||||||||||||||||||||||
sh01540 497 TGGCCCTGGTCACCTCCTGGCTCTTCATCCAGCATTCCATGATCTACTTC 546
A L V T S W L F I Q H S M I Y F
551 ----+----*----+----*----+----*----+----*----+----* 600
F H H Y E L P A I L Q Q I R I Q E
mph01638 225 TTCCACCACTATGAGTTGCCCGCCATCCTGCAGCAGATCCGAATCCAGGA 274
||||||||||| ||| |||| ||||||||||||||| |||| ||||||||
sh01540 547 TTCCACCACTACGAGCTGCCTGCCATCCTGCAGCAGGTCCGCATCCAGGA 596
F H H Y E L P A I L Q Q V R I Q E
601 ----+----*----+----*----+----*----+----*----+----* 650
M L L Q T P P L G P G T P T A L P
mph01638 275 GATGCTGCTTCAGACGCCACCGCTGGGCCCCGGGACCCCCACGGCGCTGC 324
||||||||||||| |||| || ||||||||||||||||||||||||||||
sh01540 597 GATGCTGCTTCAGGCGCCGCCACTGGGCCCCGGGACCCCCACGGCGCTGC 646
M L L Q A P P L G P G T P T A L P
651 ----+----*----+----*----+----*----+----*----+----* 700
D D L N N N S G S - A T P D
mph01638 325 CTGACGACCTCAACAACAACTCTGGCTCCC......CTGCCACTCCGGAT 368
| || ||| | ||||||||||| ||| ||| | ||| || |
sh01540 647 CCGATGACATGAACAACAACTCGGGCGCCCCGGCTACAGCCCCTGACTCT 696
D D M N N N S G A P A T A P D S
701 ----+----*----+----*----+----*----+----*----+----* 750
P S P P L A L G P S S P R A H W
mph01638 369 CCCAGCCCTCCCCTCGCGCTGGGCCCCAGCTCCAGCCCCGCGCCCACTGG 418
|| ||| |||| ||| ||||||||| ||| |||| | ||| | ||
sh01540 697 GCCGGCCAGCCCCCCGCCCTGGGCCCCGTCTC..GCCCGGGGCCAGCGGG 744
A G Q P P A L G P V S P G A S G
751 ----+----*----+----*----+----*----+----*----+----* 800
G H L G L A H W A L -
mph01638 419 ....CGGGGCATCTGGGCCTGGCTCACTGGGCGCTGG............. 451
| |||| | ||| ||| | | | | ||||
sh01540 745 AGTCCCGGGCCTGTGGCAGCGGCGCCCAGCTCCCTGGTGGCCGCGGCAGC 794
S P G P V A A A P S S L V A A A A
801 ----+----*----+----*----+----*----+----*----+----* 850
A S V S G S D L G W V A E T A
mph01638 452 ......GGCCTCAGTATCCGGCAGTGACCTAGGTTGGGTGGCCGAGACCG 495
||| ||| |||| ||||||| |||||| |||| |||||||
sh01540 795 CTCAGTGGCAGCAGCTGCCGGTGGTGACCTGGGTTGGATGGCAGAGACCG 844
S V A A A A G G D L G W M A E T A
851 ----+----*----+----*----+----*----+----*----+----* 900
A I I S D A S F L S G L S A S L
mph01638 496 CCGCCATCATCTCTGACGCATCCTTCCTGTCGGGGCTGAGCGCCTCTCTC 545
| ||||||||| | ||||| ||||||||||| || ||||||||||| |||
sh01540 845 CTGCCATCATCACAGACGCCTCCTTCCTGTCCGGCCTGAGCGCCTCCCTC 894
A I I T D A S F L S G L S A S L
901 ----+----*----+----*----+----*----+----*----+----* 950
L E R R P S P * Y P -
mph01638 546 CTGGAGCGGCGGCCA.ACAGCCCCTAGTACCCCG................ 578
||||||||||| ||| |||||| | ||| |
sh01540 895 CTGGAGCGGCGTCCAGCCAGCCCGCTGGGCCCTGCTGGGGGCCTCCCCCA 944
L E R R P A S P L G P A G G L P H
951 ----+----*----+----*----+----*----+----*----+----* 1000
mph01638 579 .................................................. 579
sh01540 945 CGCCCCCCAGGACAGTGTCCCCCCGAGTGACTCCGCAGCTTCTGACACAA 994
A P Q D S V P P S D S A A S D T T
1001 ----+----*----+----*----+----*----+----*----+----* 1050
D S S R P D P G V P
mph01638 579 ....................GACAGCTCACGACCTGACCCTGGGGTCCCT 608
| | | | | || | | | || |||
sh01540 995 CTCCCCTGGGGGCTGCGGTAGGCGGGCCTAGCCCGGCCTCCATGGCCCCA 1044
P L G A A V G G P S P A S M A P
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L E A P A P A G S *
mph01638 609 CTGGAGGACGCACCCGCCCCTGCCGGGTCCTGAG............ACCG 646
|||| || ||| | | |||||||||| |||
sh01540 1045 ACGGAG...GCGCCCTCGGAGGTGGGGTCCTGAGCCGCACAGCTGAGCCG 1091
T E A P S E V G S *
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mph01638 647 GTGTCGTGCCCGGCTCCCAGTGGAGCCGCGGCCCGAGCCCAAGAGAGCTG 696
| ||| ||| | | | | ||||||||| | | | |
sh01540 1092 CCTCTGACCCCTGCTGGCTGGGCCTGACCTTCCCGAGCCCGTGGGGGTGG 1141
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mph01638 697 .................................................. 697
sh01540 1142 GGGAGGCCAGCCACCTCCTTCCTCTGGGACTGCCCAGCCTGTGTCGGGGG 1191
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mph01638 697 .................................................. 697
sh01540 1192 CTTTCAGGGTTTCGTGGGGTTTGCCCGGAAGGCGGCTTTCCTCCCCCTGG 1241
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mph01638 697 ...............................................TGG 699
|||
sh01540 1242 TGTGAGGTCGCGCCCGAGGCTTGTACCCGCTAGTGAGGTGTTTGAGCTGG 1291
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mph01638 700 TCTGCAGGGAGAGGGGCTGG.....TGGCGAAGGTTCTGGAAGCGGC... 741
|| ||| ||||||||| ||| | |||||||||||| | | |
sh01540 1292 TCAGCAAGGAGAGGGGGTGGGGTTCCGCGGAAGGTTCTGGAGGGGTCTTG 1341
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mph01638 742 .................................................. 742
sh01540 1342 GTAGGTCTGCAGTGAACCGTCCTGAGGATGGAGTGGGGTCCCATGGTGCA 1391
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mph01638 742 .....CGGGACAGGGCGGCGATGGGCACGAG................... 767
| | || ||||| | || | | |||
sh01540 1392 GGTCTCTGAGCAAGGCGGAGGTGTGGAGGAGAGGCCGGCTTGGGGTGGGG 1441
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mph01638 768 ............................GCCATCGGCCGCCTGGTGCTCC 789
||| | ||||||||||||
sh01540 1442 CCTCGCGCCCTAGTGCCGGCCGGCCTCAGCCCGGCTCTGCCTGGTGCTCC 1491
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mph01638 790 C..CAGTGCCTTCCACACGGC............................. 808
| |||||||||| || |||
sh01540 1492 CTGCAGTGCCTTCTCCATGGCCCCGCCCTCCCCGCGTGTGCGCCAGGCCT 1541
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mph01638 809 .................................................. 809
sh01540 1542 GGGGTCCCCGGGAGAGCAGAGCTTGCGCCTCGGGCATAGGGACGTGGGGT 1591
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mph01638 809 ...........................................GCCCGCA 815
||| |
sh01540 1592 GCAGGCGCCAACATCAGTGGCAGCAGCCAGGGCCGTGGTCCAGTCCCACT 1641
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mph01638 816 CGGG...GCCGAGCGCCCGGGCCCGGACTAG.CAGGTGGTGGCTCACGAT 861
|||| | | | ||| | | || || || || || | | |
sh01540 1642 CGGGGATGGAGTGGGCCGGCGGCCAAACCAGTCACTCGGGGAGGAATGCG 1691
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mph01638 862 GCGGGGCACACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTT 911
| || || | | ||||| |||||||||||||||||||| | | ||||||
sh01540 1692 GAGGAGCGCTCATTCCATTCTATTTAATTGCAGTGTACAAAATTGTGTTT 1741
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mph01638 912 GTATATAGAATAAACTGTC.GTGGACAG...................... 938
||||||||||||||||||| || |||||
sh01540 1742 GTATATAGAATAAACTGTCTGTTGACAGCGGCTCACTGCGCTGTGTGTGT 1791
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mph01638 939 ....................TGTGGCCGTGTAGTTCCTCAGCTCTCGGCG 968
| |||| | ||||| | |||
sh01540 1792 GTCTTGAGCCCAAACGGCCCGGCTGCCGCCTCATTCCTGGCTCCCCGGTC 1841
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mph01638 969 GGCGC.....CGCATGCAGCAGGCGCAGTGGCCTGAGCCGGGTGCCATCC 1013
||| | || || |||| |||| | |||| | | || | || |||
sh01540 1842 GGCCCGCTCTGGCCTGAAGCAAGCGCCGAGGCCGGTGACGTGCGCTGTCC 1891
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mph01638 1014 CCAAGCTGGGCCCGCAGTTCCCCTCGCCGCAGCAGCGCACTACGCAGCCG 1063
|| ||||| ||| | || || || ||||||| ||| || || |||||
sh01540 1892 CCGAGCTGTGCCAGGAGCTCGCCGCGCCGCACCAGGGCCTGGCGGAGCCG 1941
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mph01638 1064 CTCCCGTGCAGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTC........ 1105
||| || || | || ||||| ||||||||||| |||| ||
sh01540 1942 CTCACGCGCGACTTCGATGCGGCGCTCCAGCTCCTGCAGCTCCCCGGGCT 1991
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mph01638 1106 ...................TGCTTGCACCCCGGGCCCATTGGAGCAGAGC 1136
||| | | | || |||||||| |||
sh01540 1992 GGGGGGCCCCCGTGGGCCTTGCGGCGGGCGGGCGGCCGTTGGAGCACAGC 2041
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mph01638 1137 CACGGATGGTCCCCGC.................................. 1152
|| || || | |
sh01540 2042 CAGACGGGGCCCTCTCGCGGCGCAGCCTCCGCCTCCGCGTCCGCTTCGGG 2091
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mph01638 1153 .....CAGCCTCCCCAGGTTCCAGCAGGAAACGCACGCGCCGTTCCCGTT 1197
|| || | | || ||||||||||| |||||||| || ||| |
sh01540 2092 TGCCACAACCACGGCGGGCTCCAGCAGGAAGCGCACGCGGCGCTCC...T 2138
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mph01638 1198 CCACCACGGCCCGGCGCACCCGCCTCCAGCGCCCCGCA.CCGTCGGCTG. 1245
|||||||||||||| |||| |||||| | ||| | |||| |||||
sh01540 2139 TGTCCACGGCCCGGCGCGCCCGTTTCCAGCCCTCCGGAGCCGTTGGCTGG 2188
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mph01638 1246 .............CAGGTTGCTCCTCCTTGGGGCCGCTAGG......... 1273
| |||||| ||| ||||||||| ||
sh01540 2189 TCCTGCTGCTGCTGCTGCTGCTCCACCTCGGGGCCGCTGGGGACGGAACC 2238
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mph01638 1274 .................................................. 1274
sh01540 2239 GGCCTGGTCAGTGTCCGCCGGGGCAGCCGTCTCGCGCCCTGGGCCTCTGC 2288
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mph01638 1274 ............ACGGAGAGGAGGAG........................ 1287
| |||||| | |
sh01540 2289 AGAGGCCCCTGACGGCAGAGGATGGGCGACAGGCACAACCAGGGACCCCC 2338
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mph01638 1288 ......GCAGTACTGCCTGTCTGCTCGCTAAGCCTGGGACCCCGCTCTGC 1331
||| | | | | || | | | |||| || ||| |
sh01540 2339 CGGTTTGCACTTCCGGGGGGGGGCGGGGGACCTCCGGGAACCTCCTCCAC 2388
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mph01638 1332 CCC............................................... 1334
|||
sh01540 2389 CCCCCGCCCGGCTTCGGGGCGAGCTGGTGGGGTGGTGGGTCTGGGTGGTC 2438
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mph01638 1335 .........GCCCCGCCCCGCCCCGTGGTTACCTGCACTCCTGCTCTGCC 1375
| || ||||| || ||||||| |||| |||||||
sh01540 2439 CTGCATCGTGGTCCCCCCCGACCACCACTTACCTGGGCTCCGCCTCTGCC 2488
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mph01638 1376 CTCTCCTGTT...GCCCCTCTGGTGGCCCTGTGTTGAGGGCTCGGTGGAT 1422
|||||| | ||||||||||||| | ||||||||||| ||||||||
sh01540 2489 GTCTCCTCCTTCGACCCCTCTGGTGGCTCCGTGTTGAGGGCGCGGTGGAT 2538
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mph01638 1423 CTTCTAGGGGCACAGACA.....GGTGTTTGGGTAGGCTCCTGAGGTGCC 1467
||||| | | |||||| ||| | | |||| | ||||
sh01540 2539 TTTCTAAGACCCCAGACAGACCCGGTTGGCGAGGAGGCGGGGGGGGTGGG 2588
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mph01638 1468 CTCCACCCCGCCCTACCTTGTCTTGCCTCCTCACCTGGCTCGTGTGAAGC 1517
| || | || ||| |||| ||||||||| ||||| |||
sh01540 2589 GCCGCCCGCCGCCCACC.......CGCTCCCCACCTGGCTGGTGTGCAGC 2631
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mph01638 1518 CAATACTGCAGCTTATTGCCCCTGCGGATGCGCGGCAGCACCAGGCGGTA 1567
|| ||||||||| | | ||| ||||||||||||||||| |||||||| |
sh01540 2632 CAGTACTGCAGCCTGCTCCCCTTGCGGATGCGCGGCAGCGCCAGGCGGAA 2681
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mph01638 1568 GAAGACGTGCTCACCCAGCGAGGTGAGAAGTGCACTGCCCAGCCCGAGGC 1617
|||| ||||||| ||||||||| |||| || || |||||||| || ||||
sh01540 2682 GAAGGCGTGCTCGCCCAGCGAGCTGAGCAGAGCGCTGCCCAGGCCCAGGC 2731
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mph01638 1618 ACAGCAGGACAAACAACCCTGACAAGTGGTAGACCCCCATCTGCAGCGTC 1667
|||||| || || | || | |||||||||| | ||||||||| |||
sh01540 2732 ACAGCAACACGAAGAGGCCCGCGAAGTGGTAGATGCTCATCTGCAGGGTC 2781
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mph01638 1668 TGTGAATGGCAAGAAAATTCCCACACAGCGTC.................. 1699
|| | || | || | || |||
sh01540 2782 TGGGGGCAACACAGCAGGAGCCCCGCACGGTCACGTAATGGCAGGCCCCT 2831
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mph01638 1700 ...................GGGATGAGGACACCCCATCCCATTCCGCCCC 1730
| || ||| ||| ||
sh01540 2832 GGGGAGCCTTGAACTAGGGGAGAACAGGTTGGGCCAGAGAGAGGGGCTTG 2881
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mph01638 1731 GGGCAGGGCAGCTAGG.................................G 1747
|||||| | ||| ||| |
sh01540 2882 GGGCAGTGGAGCCAGGTTGGGAGGCAGGGACTCCATGGCTGGGGGGAGTG 2931
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mph01638 1748 AGATCTCTTAAAGGAAGGGACGCTGGAGCTGGGGTTGTTTAGAGCGAGCA 1797
|| | || | |||||||| | ||| ||| |||||| | ||| | || |
sh01540 2932 AGGTTTCATGGAGGAAGGGGCACTGCAGCCGGGGTTTTGTAGGGTGAATA 2981
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mph01638 1798 GGAATGCATGCAAGCATA................................ 1815
| | ||| ||||| |
sh01540 2982 GAAGTGCGCAGAAGCAGACAAACGCACGTCTGGGGAATGAGCACTGGGGT 3031
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mph01638 1816 ....................................GCCTGGGCTCCCCA 1829
| |||||
sh01540 3032 TGGTCACCTCAGACAAGGCTCAGGGCCCCCCACGCCCACCCCCACCCCCA 3081
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mph01638 1830 CCCTGTGTCTCTGGCGCCTGCCCACCTCCGTCACGGCGAACACCCGCTTC 1879
|||| |||| | ||| | |||||||| || || || || ||||||||
sh01540 3082 CCCTCTGTCCCAGGCCCTGCCCCACCTCTGTAACCGCAAAGACCCGCTTG 3131
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mph01638 1880 CCGCAAGGCACCATCTTGTACCACTTGTCATGGAGCAGATCAATGAAGCC 1929
||||||||||||||||||||||||||||| |||||||| || ||||||||
sh01540 3132 CCGCAAGGCACCATCTTGTACCACTTGTCGTGGAGCAGGTCGATGAAGCC 3181
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mph01638 1930 TGAGGACTTGTACCTACTGATGAACTCTGACAGGTTGGAGGTGAGCGGCG 1979
||||||||||| | ||||||||||| ||||||||||||| | | |
sh01540 3182 GGAGGACTTGTAGCGGCTGATGAACTCGGACAGGTTGGAGGAGGTCCCCA 3231
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mph01638 1980 AATTTTGGGGCAGCCCTATGCCGTAGCCTGCGGAGATTGAGAGGGCTCCA 2029
| ||| ||| |
sh01540 3232 GAGACCCCGGCGCCCCGCCTC............................. 3252
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mph01638 2030 CTAAAGCTGCGGGCACCTACAGCTGCGATCCCCAGAGCCCCACCACGCAC 2079
|||| | |
sh01540 3253 .....................................GCCCAGGTGCCTC 3265
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mph01638 2080 TCACCCTCGATCGCAAAGGGTTTGCCCACGGTGAGCAGCTTGCAGTCCGC 2129
|||||||| || || ||||| || |||||||| ||||| |||||||| ||
sh01540 3266 TCACCCTCAATGGCGAAGGGCTTTCCCACGGTCAGCAGTTTGCAGTCGGC 3315
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mph01638 2130 ATCTATGGACACCTCATAATCCAGTAGTGATTTATCCATGATGAAGGCGT 2179
|| ||||| ||||| || ||||| || || || ||||||||||||||||
sh01540 3316 GTCGATGGAGACCTCGTAGTCCAGGAGCGACTTGTCCATGATGAAGGCGT 3365
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mph01638 2180 TGAGCTTGGGCGGGTCGCTCCTGTGGGG...CAGGACAAGGCAAGGTCAA 2226
|||||||||| |||||||||||| ||| || | || ||
sh01540 3366 TGAGCTTGGGGGGGTCGCTCCTGCTGGGGCCGGGGGCGGGGGTCACCCAT 3415
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mph01638 2227 TAGGGTCTGAGAAGCAGGTGGCCCTCCGAAGCTGCACGGTACCCACAGAC 2276
| | | ||| || || ||| | | | | |
sh01540 3416 CGCCCCCCCCCACCCCACGCCCCCGCCCCCGCCTCACCCCGCGCCCGGGC 3465
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mph01638 2277 TCACGTGAGCATGGCCACTCCGTGTGGAGTGGTAGGTGCGCTGTGGCGAC 2326
||||||||||||||| || ||| | || ||||| || ||||||||||| |
sh01540 3466 TCACGTGAGCATGGCGACGCCGCGGGGCGTGGTGGGCGCGCTGTGGCGCC 3515
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mph01638 2327 GCATGTGTGCGTGCATCTCGGGGAAGCTCGCCTTGATGTAGGCCTCCGCG 2376
|||||||||||||||| |||||||||||| ||||||||| ||||| |||
sh01540 3516 GCATGTGTGCGTGCATGTCGGGGAAGCTCTTCTTGATGTACGCCTCGGCG 3565
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mph01638 2377 CTGCTCTCCCACACGGTGCCAAAGCGGAAGCCTTGGGAAGGGTGGTGCAG 2426
|||||||||||||||||||| ||||||||||| || | |||||||||||
sh01540 3566 CTGCTCTCCCACACGGTGCCGAAGCGGAAGCCCTGCGCCGGGTGGTGCAG 3615
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mph01638 2427 CTGCAGGGGAGGC........ATGCTCAGCCTGCAGCACACATCCCC... 2465
|||| ||| | | ||| |||||| | || ||||
sh01540 3616 CTGCGCGGGGGACCCCGTCAGCGCCTCTGCCTGCCCCTCAGGACCCCTGA 3665
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mph01638 2466 .................................................. 2466
sh01540 3666 CCATTGAGGGGCGCGCCGTTCTCCGGGGTGGGGCCGTCCTGGGCACTGCA 3715
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mph01638 2466 .............................................ACCAG 2470
| ||
sh01540 3716 GGGCGCCGAGGCTGCATTCCTGGCCTCCACCCACTCCATGCCCAGAGCAC 3765
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mph01638 2471 GGCCTACGTGTGACCAC................................. 2487
|| | | ||||||||
sh01540 3766 ACCCCAGGCGTGACCACCACAGCTGTCTCTAGACACACACTGTCCAGGGT 3815
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mph01638 2488 .................................................. 2488
sh01540 3816 CCCCTGGGGCGGGGGGCAGGATCACCCCGGGTGGAGACCCTCTGTTCTAA 3865
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mph01638 2488 ..................CTGCAGGGACCTTGCACTGAGCT......... 2510
| | |||||| || ||| |||
sh01540 3866 ACGCCCGCAAGTCCATCTCCACCCGGACCTCGCCCTGGGCTGGACGCCTA 3915
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mph01638 2511 .................................................. 2511
sh01540 3916 TCCCACCACCTCCTCTGCCTCTCCCCTGGGGGTCCCACGGGAGCCCCACT 3965
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mph01638 2511 ....CAGATTCAGTAACCCGCAAATATTCTAC.................. 2538
|| | || | ||| | | ||| |
sh01540 3966 CTAACATGTCCATGACCCCACTCCTGATCTGCCCCCACTCGCTCTTCCCA 4015
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mph01638 2539 .................................................. 2539
sh01540 4016 CCCCAGGCGGAGGCAGCTCTGTCGTCACTGCCTCTGACACCCTGTTTCTC 4065
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mph01638 2539 .................................................. 2539
sh01540 4066 CCGAAAACCCTGGGGGGCTCCACCTGCAACACAGGGAACTGCCCACTGCT 4115
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mph01638 2539 ..........................TTGAGAACCCCAGAGATACCAGTT 2562
| | | | | || ||||
sh01540 4116 CACCCCTCCACAGCTCCCACCCAGGTTGGGGCCCAGCGTCGAACCCAGCC 4165
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mph01638 2563 TCTTCTGCTCTCATCCCCCTGGCCCCCTCCTGCCCCC............. 2599
|| | | ||| | ||| | || || | ||||
sh01540 4166 TCCTTCCCCATCAACATCCTCGACCAGCCCAGGCCCCTCTGCGGGGTCCT 4215
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mph01638 2600 .................................................. 2600
sh01540 4216 CCCTGCACCACCCGTGGTCTGTTCTCCCCACAGCTGCCAGGGCAACCTGG 4265
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mph01638 2600 .................................................. 2600
sh01540 4266 TGCAGACCCCTAATGAGTAGGTGGGTCTGGCTGCTGAGGTCACACCAGCC 4315
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mph01638 2600 .................................................. 2600
sh01540 4316 AAGGCCTCCCCACGGGATTCCAGCACCACCAAAAACCCAAACTTGAATCC 4365
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mph01638 2600 .............AGCCATCAACCACTTATGGTATCT............. 2623
| || || | || |||| | |
sh01540 4366 CATCGTGCCTGTGGGTCAGCAGCATCTGATGGAAGTTTCCGTATGATGAA 4415
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mph01638 2624 .......................................AGAGCATTAGG 2634
||||| ||
sh01540 4416 AAGGCTTTGACGGCTCAGCTGTGCAGCGTTTACATTGGAAGAGCCGCCGG 4465
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mph01638 2635 CAGCACCCAG......................................TT 2646
||||| ||| |
sh01540 4466 CAGCAGTCAGCTCACCTGACAGCATGGCGTCTACGCTTTACTACCGTTTC 4515
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mph01638 2647 GCAAGGGACACAAAGGACACAAGGTGGGGAGGGGACGGTCAACAGAACAT 2696
|| ||||||| | || | | || || | | | |||
sh01540 4516 ACAGGGGACACCAGGGGCTGGGGAGCAGGCCAGGCACCCCCAGGGGACAC 4565
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mph01638 2697 GAGCAGCTAGATCCCTAGG...AGGGAAGTTGCTGTGTAAATACCATGAA 2743
| | |||||| | | || || | | | | | | | | ||
sh01540 4566 CACTGGGCAGATCCAAAAGTTCAGAGACACTACGGGGCAGAAAACCCGAC 4615
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mph01638 2744 CTCCAGAAAACATAAAAGGGGGAAATAAATCCGGATGTGCTTCAGCCTGC 2793
| || | || | | ||||| | |||| ||| | ||
sh01540 4616 TTTGCCAAGAAATTACAAGGGGAGGCCGGGCACGATG.GCTCACGTCTAA 4664
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mph01638 2794 CACCCCTGCAGTGGGAGCTGGTG........................... 2816
|| | | ||||||| | |
sh01540 4665 TCCCACCACTGTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGG 4714
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mph01638 2817 .................................................. 2817
sh01540 4715 TGGAGGTTGCGGTGAGCTGAGATCACTGCACTCCAGCTCTGGGCAGGAGT 4764
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mph01638 2817 ........GTTTCCAGGCTGAAGACCGATTGCTTAGGCCAGTCGTGGTG. 2857
|| || | || | || |||||| ||||||
sh01540 4765 GAGACTCTGTCTCAAAAAATAATAATAATAATACGGGCCAGATGTGGTGG 4814
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mph01638 2858 ...........AATTCCAGCACTCAGGAGGCAGAGGCAGTCGGGTC.... 2892
|| |||||||| |||||| |||| | ||| ||
sh01540 4815 CTCACGCCTGTGATCCCAGCACTTGGGAGGCCGAGGTGGGCGGATCACGA 4864
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mph01638 2893 .TTTGTGAGTCTGAGGCCAACCTGGTCTACAAACTGA.....GCTAAGAC 2936
| | || ||| ||| ||||| | ||| ||| || || |
sh01540 4865 GGTCAGGGGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCGCCAACTC 4914
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mph01638 2937 ATCTGATGCTTAAGAATGGGGGTGTGGCCGGGCGCGGTAGCATGGTGGCA 2986
|||| | | || | || ||||||
sh01540 4915 TACTGAAAATACAAAAGCCAG..................GCTTGGTGGTG 4946
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mph01638 2987 CATGCCTTTAATCCTAGC.ACTCCGGAGGCAGAGGCAGGCGGATTTCT.. 3033
|| ||| | |||| ||| || |||||| |||||||| | || ||
sh01540 4947 CACACCTGTGATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCGCTTG 4996
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mph01638 3034 .............GAGTTCGAGGCCAGCTTGG.TCTACAAAGTGAGTTCT 3069
||| | | | ||| || || | || | ||
sh01540 4997 AGCCCAGGAGGCAGAGGTTGCAGTGAGCCAGGATCGTGCCACTGCGCTC. 5045
5151 ----+----*----+----*----+----*----+----*--- 5193
mph01638 3070 AGGACAGCCAGGGTTATACAGAGAAATCCTGTCTTGAAAAACC 3112
||||| ||| || ||| || ||||||
sh01540 5046 ....CAGCCTGGGCGAT..GGAGCAAGACTGTCTC........ 5074