# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph01493.fasta.nr -Q ../query/mKIAA0249.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0249, 115 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7921091 sequences
Expectation_n fit: rho(ln(x))= 4.6759+/-0.000178; mu= 7.4796+/- 0.010
mean_var=57.4204+/-11.189, 0's: 41 Z-trim: 45 B-trim: 12 in 1/64
Lambda= 0.169255
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|12330448|gb|AAG52761.1|AF286723_1 LPIN2 [Mus mu ( 893) 810 205.7 9.8e-51
gi|47606763|sp|Q99PI5.2|LPIN2_MOUSE RecName: Full= ( 893) 810 205.7 9.8e-51
gi|148706430|gb|EDL38377.1| lipin 2, isoform CRA_d ( 930) 810 205.7 1e-50
gi|26340852|dbj|BAC34088.1| unnamed protein produc ( 235) 802 203.3 1.3e-50
gi|149036291|gb|EDL90950.1| lipin 2 (predicted) [R ( 894) 802 203.7 3.8e-50
gi|73962063|ref|XP_849491.1| PREDICTED: similar to ( 900) 793 201.5 1.8e-49
gi|109121687|ref|XP_001085578.1| PREDICTED: lipin ( 880) 792 201.3 2e-49
gi|2495724|sp|Q92539.1|LPIN2_HUMAN RecName: Full=L ( 896) 792 201.3 2.1e-49
gi|109121685|ref|XP_001085702.1| PREDICTED: lipin ( 896) 792 201.3 2.1e-49
gi|109121681|ref|XP_001085817.1| PREDICTED: lipin ( 933) 792 201.3 2.1e-49
gi|114672425|ref|XP_512044.2| PREDICTED: lipin 2 i ( 896) 780 198.4 1.6e-48
gi|114672423|ref|XP_001146228.1| PREDICTED: lipin ( 933) 780 198.4 1.6e-48
gi|211908632|gb|ACJ12613.1| lipin 2 [Sus scrofa] ( 891) 776 197.4 3.1e-48
gi|169248250|gb|ACA51851.1| lipin 2 [Sus scrofa] ( 891) 767 195.2 1.4e-47
gi|71051612|ref|NP_001006386.2| lipin 2 [Gallus ga ( 851) 765 194.7 1.9e-47
gi|224046116|ref|XP_002193092.1| PREDICTED: lipin ( 851) 748 190.5 3.4e-46
gi|224046114|ref|XP_002193065.1| PREDICTED: lipin ( 887) 748 190.5 3.5e-46
gi|119916245|ref|XP_592307.3| PREDICTED: lipin 2 [ (1166) 742 189.2 1.2e-45
gi|149633738|ref|XP_001506888.1| PREDICTED: simila ( 863) 731 186.4 6.1e-45
gi|112419083|gb|AAI21960.1| Lipin 2 [Xenopus tropi ( 883) 718 183.2 5.6e-44
gi|37747779|gb|AAH60016.1| MGC68631 protein [Xenop ( 882) 714 182.2 1.1e-43
gi|47215894|emb|CAG12286.1| unnamed protein produc ( 932) 645 165.4 1.4e-38
gi|159155672|gb|AAI54650.1| LOC558422 protein [Dan ( 253) 628 160.9 8.7e-38
gi|125806017|ref|XP_707850.2| PREDICTED: hypotheti ( 880) 628 161.2 2.3e-37
gi|47213296|emb|CAG12378.1| unnamed protein produc ( 838) 559 144.4 2.6e-32
gi|81097708|gb|AAI09409.1| Zgc:123305 [Danio rerio ( 592) 544 140.6 2.5e-31
gi|149636104|ref|XP_001509618.1| PREDICTED: simila ( 927) 537 139.0 1.2e-30
gi|194375712|dbj|BAG57200.1| unnamed protein produ ( 391) 521 134.9 9e-30
gi|73979755|ref|XP_857003.1| PREDICTED: similar to ( 345) 520 134.6 9.6e-30
gi|194378414|dbj|BAG57957.1| unnamed protein produ ( 620) 521 135.0 1.3e-29
gi|51491201|emb|CAH18666.1| hypothetical protein [ ( 620) 521 135.0 1.3e-29
gi|114576161|ref|XP_001160568.1| PREDICTED: lipin ( 839) 521 135.1 1.6e-29
gi|119621324|gb|EAX00919.1| lipin 1, isoform CRA_b ( 865) 521 135.1 1.7e-29
gi|114576137|ref|XP_001160261.1| PREDICTED: lipin ( 890) 521 135.1 1.7e-29
gi|23831266|sp|Q14693.2|LPIN1_HUMAN RecName: Full= ( 890) 521 135.1 1.7e-29
gi|20987795|gb|AAH30537.1| Lipin 1 [Homo sapiens] ( 890) 521 135.1 1.7e-29
gi|123996001|gb|ABM85602.1| lipin 1 [synthetic con ( 890) 521 135.1 1.7e-29
gi|119621323|gb|EAX00918.1| lipin 1, isoform CRA_a ( 896) 521 135.1 1.7e-29
gi|221044334|dbj|BAH13844.1| unnamed protein produ ( 896) 521 135.1 1.7e-29
gi|114576159|ref|XP_001160608.1| PREDICTED: lipin ( 916) 521 135.1 1.8e-29
gi|114576157|ref|XP_001160661.1| PREDICTED: lipin ( 926) 521 135.1 1.8e-29
gi|194378270|dbj|BAG57885.1| unnamed protein produ ( 975) 521 135.1 1.8e-29
gi|149408702|ref|XP_001505406.1| PREDICTED: simila ( 898) 520 134.9 2.1e-29
gi|149408704|ref|XP_001505253.1| PREDICTED: simila ( 903) 520 134.9 2.1e-29
gi|149408700|ref|XP_001505219.1| PREDICTED: simila ( 934) 520 134.9 2.1e-29
gi|73979753|ref|XP_532878.2| PREDICTED: similar to ( 941) 520 134.9 2.1e-29
gi|73979757|ref|XP_848781.1| PREDICTED: similar to ( 977) 520 134.9 2.2e-29
gi|194220958|ref|XP_001502220.2| PREDICTED: simila (1041) 520 134.9 2.3e-29
gi|73991994|ref|XP_543000.2| PREDICTED: similar to ( 843) 518 134.4 2.7e-29
gi|73991992|ref|XP_866110.1| PREDICTED: similar to ( 854) 518 134.4 2.8e-29
>>gi|12330448|gb|AAG52761.1|AF286723_1 LPIN2 [Mus muscul (893 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1067.1 bits: 205.7 E(): 9.8e-51
Smith-Waterman score: 810; 100.000% identity (100.000% similar) in 115 aa overlap (1-115:779-893)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::::::::::::
gi|123 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGN
750 760 770 780 790 800
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
810 820 830 840 850 860
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::::::::::
gi|123 FPCPEFSSFCYWRDPIPDLDLDDLA
870 880 890
>>gi|47606763|sp|Q99PI5.2|LPIN2_MOUSE RecName: Full=Lipi (893 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1067.1 bits: 205.7 E(): 9.8e-51
Smith-Waterman score: 810; 100.000% identity (100.000% similar) in 115 aa overlap (1-115:779-893)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::::::::::::
gi|476 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGN
750 760 770 780 790 800
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|476 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
810 820 830 840 850 860
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::::::::::
gi|476 FPCPEFSSFCYWRDPIPDLDLDDLA
870 880 890
>>gi|148706430|gb|EDL38377.1| lipin 2, isoform CRA_d [Mu (930 aa)
initn: 810 init1: 810 opt: 810 Z-score: 1066.9 bits: 205.7 E(): 1e-50
Smith-Waterman score: 810; 100.000% identity (100.000% similar) in 115 aa overlap (1-115:816-930)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::::::::::::
gi|148 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGN
790 800 810 820 830 840
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
850 860 870 880 890 900
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::::::::::
gi|148 FPCPEFSSFCYWRDPIPDLDLDDLA
910 920 930
>>gi|26340852|dbj|BAC34088.1| unnamed protein product [M (235 aa)
initn: 802 init1: 802 opt: 802 Z-score: 1064.8 bits: 203.3 E(): 1.3e-50
Smith-Waterman score: 802; 99.130% identity (99.130% similar) in 115 aa overlap (1-115:121-235)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::::::::::::
gi|263 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGN
100 110 120 130 140 150
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
gi|263 RPNDVYAYTQVGVPDCRIFTVNPKGELIQESTKGNKSSYHRLSELVEHVFPLLSKEQNSA
160 170 180 190 200 210
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::::::::::
gi|263 FPCPEFSSFCYWRDPIPDLDLDDLA
220 230
>>gi|149036291|gb|EDL90950.1| lipin 2 (predicted) [Rattu (894 aa)
initn: 802 init1: 802 opt: 802 Z-score: 1056.6 bits: 203.7 E(): 3.8e-50
Smith-Waterman score: 802; 98.261% identity (100.000% similar) in 115 aa overlap (1-115:780-894)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::::::::::::
gi|149 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGN
750 760 770 780 790 800
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
gi|149 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSA
810 820 830 840 850 860
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
::::::::::::::::::.::::::
gi|149 FPCPEFSSFCYWRDPIPDVDLDDLA
870 880 890
>>gi|73962063|ref|XP_849491.1| PREDICTED: similar to Lip (900 aa)
initn: 793 init1: 793 opt: 793 Z-score: 1044.7 bits: 201.5 E(): 1.8e-49
Smith-Waterman score: 793; 97.391% identity (99.130% similar) in 115 aa overlap (1-115:786-900)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::.:::::::::
gi|739 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGN
760 770 780 790 800 810
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
820 830 840 850 860 870
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
::::::::::::::::: .::::::
gi|739 FPCPEFSSFCYWRDPIPKVDLDDLA
880 890 900
>>gi|109121687|ref|XP_001085578.1| PREDICTED: lipin 2 is (880 aa)
initn: 818 init1: 792 opt: 792 Z-score: 1043.5 bits: 201.3 E(): 2e-49
Smith-Waterman score: 792; 96.522% identity (100.000% similar) in 115 aa overlap (1-115:766-880)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::.:::::::::
gi|109 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGN
740 750 760 770 780 790
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
800 810 820 830 840 850
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::..:::::.
gi|109 FPCPEFSSFCYWRDPIPEVDLDDLS
860 870 880
>>gi|2495724|sp|Q92539.1|LPIN2_HUMAN RecName: Full=Lipin (896 aa)
initn: 818 init1: 792 opt: 792 Z-score: 1043.4 bits: 201.3 E(): 2.1e-49
Smith-Waterman score: 792; 96.522% identity (100.000% similar) in 115 aa overlap (1-115:782-896)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::.:::::::::
gi|249 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGN
760 770 780 790 800 810
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|249 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
820 830 840 850 860 870
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::..:::::.
gi|249 FPCPEFSSFCYWRDPIPEVDLDDLS
880 890
>>gi|109121685|ref|XP_001085702.1| PREDICTED: lipin 2 is (896 aa)
initn: 818 init1: 792 opt: 792 Z-score: 1043.4 bits: 201.3 E(): 2.1e-49
Smith-Waterman score: 792; 96.522% identity (100.000% similar) in 115 aa overlap (1-115:782-896)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::.:::::::::
gi|109 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGN
760 770 780 790 800 810
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
820 830 840 850 860 870
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::..:::::.
gi|109 FPCPEFSSFCYWRDPIPEVDLDDLS
880 890
>>gi|109121681|ref|XP_001085817.1| PREDICTED: lipin 2 is (933 aa)
initn: 818 init1: 792 opt: 792 Z-score: 1043.1 bits: 201.3 E(): 2.1e-49
Smith-Waterman score: 792; 96.522% identity (100.000% similar) in 115 aa overlap (1-115:819-933)
10 20 30
mKIAA0 KPEKFKIECLNDIKNLFAPSRQPFYAAFGN
::::::::::::::::::::.:::::::::
gi|109 NDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGN
790 800 810 820 830 840
40 50 60 70 80 90
mKIAA0 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSA
850 860 870 880 890 900
100 110
mKIAA0 FPCPEFSSFCYWRDPIPDLDLDDLA
:::::::::::::::::..:::::.
gi|109 FPCPEFSSFCYWRDPIPEVDLDDLS
910 920 930
115 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 16:11:45 2009 done: Fri Mar 13 16:15:28 2009
Total Scan time: 530.140 Total Display time: 0.030
Function used was FASTA [version 34.26.5 April 26, 2007]