Comparison of KIAA cDNA sequences between mouse and human (KIAA1646)

<<Original sequence data>>

mouse  mKIAA1646 (mph01246)     length:   3661 bp, CDS:     2 -  1231
human   KIAA1646  (hk01650)     length:   4171 bp, CDS:     2 -  1447

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:    142 -   142       0        1      100.0
  CDS:    143 -  1429    1002      229      18.6
3'UTR:   1430 -  4340    1354      956      41.4

amino acid

  CDS:    143 -  1429     354       75      17.5
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mph01246     1 .................................................. 1
                                                                 
hk01650      1 GATCATCGCCGTTGAGGAAACAGACGTTCACGGGAAACATCAAGGCAGTG 50
                I  I  A  V  E  E  T  D  V  H  G  K  H  Q  G  S  G

            51 ----+----*----+----*----+----*----+----*----+----* 100
mph01246     1 .................................................. 1
                                                                 
hk01650     51 GAAAATGGCAGAAAATGGAAAAGCCTTACGCTTTTACAGTTCACTGTGTA 100
                 K  W  Q  K  M  E  K  P  Y  A  F  T  V  H  C  V  

           101 ----+----*----+----*----+----*----+----*----+----* 150
                                                         F  C  F 
mph01246     1 .........................................ATTTTGTTT 9
                                                         || || | 
hk01650    101 AAGAGAGCACGACGGCACCGCTGGAAGTGGGCGCAGGTGACTTTCTGGTG 150
               K  R  A  R  R  H  R  W  K  W  A  Q  V  T  F  W  C 

           151 ----+----*----+----*----+----*----+----*----+----* 200
                A  -                                             
mph01246    10 TGCAG............................................. 14
               | |||                                             
hk01650    151 TCCAGAGGAGCAGCTGTGTCACTTGTGGCTGCAGACCCTGCGGGAGATGC 200
                P  E  E  Q  L  C  H  L  W  L  Q  T  L  R  E  M  L

           201 ----+----*----+----*----+----*----+----*----+----* 250
                             S  R  P  K  H  L  L  V  F  I  N  P  
mph01246    15 ............CTTCAAGACCGAAGCACTTGCTGGTATTCATCAACCCT 52
                           | || ||||| ||||| || |||||||| |||||||| 
hk01650    201 TGGAGAAGCTGACGTCCAGACCAAAGCATTTACTGGTATTTATCAACCCG 250
                 E  K  L  T  S  R  P  K  H  L  L  V  F  I  N  P  

           251 ----+----*----+----*----+----*----+----*----+----* 300
               F  G  G  K  G  Q  G  K  R  I  Y  E  K  T  V  A  P 
mph01246    53 TTCGGAGGGAAAGGTCAGGGCAAGCGCATCTATGAAAAAACAGTGGCGCC 102
               || ||||| ||||| || |||||||| || ||||||| || |||||| ||
hk01650    251 TTTGGAGGAAAAGGACAAGGCAAGCGGATATATGAAAGAAAAGTGGCACC 300
               F  G  G  K  G  Q  G  K  R  I  Y  E  R  K  V  A  P 

           301 ----+----*----+----*----+----*----+----*----+----* 350
                L  F  T  L  A  S  I  T  T  E  I  I  I  T  E  H  A
mph01246   103 TCTGTTTACCTTGGCTTCCATCACTACGGAGATCATCATTACAGAGCATG 152
                ||||| ||||| || |||||||| || || |||||| |||| || ||||
hk01650    301 ACTGTTCACCTTAGCCTCCATCACCACTGACATCATCGTTACTGAACATG 350
                L  F  T  L  A  S  I  T  T  D  I  I  V  T  E  H  A

           351 ----+----*----+----*----+----*----+----*----+----* 400
                 N  Q  A  K  E  T  L  Y  E  I  N  T  D  S  Y  D  
mph01246   153 CCAACCAAGCCAAGGAGACTTTATACGAGATCAACACAGACAGCTATGAT 202
               | || || |||||||||||| | || ||||| |||| |||||  || || 
hk01650    351 CTAATCAGGCCAAGGAGACTCTGTATGAGATTAACATAGACAAATACGAC 400
                 N  Q  A  K  E  T  L  Y  E  I  N  I  D  K  Y  D  

           401 ----+----*----+----*----+----*----+----*----+----* 450
               G  I  V  C  V  G  G  D  G  M  F  S  E  V  L  H  G 
mph01246   203 GGCATCGTGTGCGTAGGTGGGGACGGCATGTTCAGCGAGGTGCTGCATGG 252
               |||||||| || || || || || || |||||||||||||||||||| ||
hk01650    401 GGCATCGTCTGTGTCGGCGGAGATGGTATGTTCAGCGAGGTGCTGCACGG 450
               G  I  V  C  V  G  G  D  G  M  F  S  E  V  L  H  G 

           451 ----+----*----+----*----+----*----+----*----+----* 500
                V  I  G  R  T  Q  Q  S  A  G  I  D  P  N  H  P  R
mph01246   253 GGTGATTGGGAGGACGCAGCAGAGCGCTGGTATCGACCCCAATCACCCCC 302
                 |||||||||||||||||  |||||| ||  ||||||  || |||||||
hk01650    451 TCTGATTGGGAGGACGCAGAGGAGCGCCGGGGTCGACCAGAACCACCCCC 500
                L  I  G  R  T  Q  R  S  A  G  V  D  Q  N  H  P  R

           501 ----+----*----+----*----+----*----+----*----+----* 550
                 A  V  L  V  P  S  T  L  R  I  G  I  I  P  A  G  
mph01246   303 GAGCCGTGCTGGTGCCCAGTACCCTCAGGATCGGCATCATACCCGCAGGG 352
               | || |||||||| ||||||| |||| |||| || ||||| |||||||||
hk01650    501 GGGCTGTGCTGGTCCCCAGTAGCCTCCGGATTGGAATCATTCCCGCAGGG 550
                 A  V  L  V  P  S  S  L  R  I  G  I  I  P  A  G  

           551 ----+----*----+----*----+----*----+----*----+----* 600
               S  T  D  C  V  C  Y  S  T  V  G  T  N  D  A  E  T 
mph01246   353 TCCACAGATTGTGTGTGTTACTCAACAGTGGGCACAAACGACGCAGAGAC 402
               || || || || ||||||||||| || |||||||| | ||||||||| ||
hk01650    551 TCAACGGACTGCGTGTGTTACTCCACCGTGGGCACCAGCGACGCAGAAAC 600
               S  T  D  C  V  C  Y  S  T  V  G  T  S  D  A  E  T 

           601 ----+----*----+----*----+----*----+----*----+----* 650
                S  A  L  H  I  I  I  G  D  S  L  A  I  D  V  S  S
mph01246   403 ATCGGCTTTGCACATCATTATTGGGGACTCGCTGGCAATAGACGTGTCCT 452
                |||||  |||| ||| || |||||||||||||||| || || |||||||
hk01650    601 CTCGGCGCTGCATATCGTTGTTGGGGACTCGCTGGCCATGGATGTGTCCT 650
                S  A  L  H  I  V  V  G  D  S  L  A  M  D  V  S  S

           651 ----+----*----+----*----+----*----+----*----+----* 700
                 V  H  Y  H  N  T  L  L  R  Y  S  V  S  L  L  G  
mph01246   453 CTGTGCACTACCATAACACGCTGCTGCGGTACTCGGTTTCTCTGCTGGGC 502
               | || ||| || | | ||| || || || ||||| || || |||||||||
hk01650    651 CAGTCCACCACAACAGCACACTCCTTCGCTACTCCGTGTCCCTGCTGGGC 700
                 V  H  H  N  S  T  L  L  R  Y  S  V  S  L  L  G  

           701 ----+----*----+----*----+----*----+----*----+----* 750
               Y  G  F  Y  G  D  L  I  K  D  S  E  K  K  R  W  M 
mph01246   503 TACGGTTTCTACGGGGACTTAATCAAGGACAGCGAAAAGAAACGGTGGAT 552
               ||||| |||||||||||| | ||||||||||| || |||||||||||| |
hk01650    701 TACGGCTTCTACGGGGACATCATCAAGGACAGTGAGAAGAAACGGTGGTT 750
               Y  G  F  Y  G  D  I  I  K  D  S  E  K  K  R  W  L 

           751 ----+----*----+----*----+----*----+----*----+----* 800
                G  L  V  R  Y  D  F  S  G  L  K  T  F  L  S  H  Q
mph01246   553 GGGCCTCGTCCGGTATGATTTCTCAGGGTTGAAGACCTTTCTCTCTCATC 602
               ||| || | | | || || || ||||| || |||||||| ||||| || |
hk01650    751 GGGTCTTGCCAGATACGACTTTTCAGGTTTAAAGACCTTCCTCTCCCACC 800
                G  L  A  R  Y  D  F  S  G  L  K  T  F  L  S  H  H

           801 ----+----*----+----*----+----*----+----*----+----* 850
                 Y  Y  E  G  T  L  S  F  L  P  A  Q  H  T  V  G  
mph01246   603 AGTACTATGAAGGGACACTGTCCTTCCTCCCAGCACAGCACACGGTGGGA 652
               | | ||||||||||||| ||||||||||||| ||||| ||||||||||||
hk01650    801 ACTGCTATGAAGGGACAGTGTCCTTCCTCCCTGCACAACACACGGTGGGA 850
                 C  Y  E  G  T  V  S  F  L  P  A  Q  H  T  V  G  

           851 ----+----*----+----*----+----*----+----*----+----* 900
               S  P  R  D  N  K  P  C  R  A  G  C  F  V  C  R  Q 
mph01246   653 TCTCCACGGGACAATAAACCCTGCCGGGCTGGGTGCTTCGTGTGCAGGCA 702
               |||||| |||| |  || ||||||||||| || ||||| || ||||||||
hk01650    851 TCTCCAAGGGATAGGAAGCCCTGCCGGGCAGGATGCTTTGTTTGCAGGCA 900
               S  P  R  D  R  K  P  C  R  A  G  C  F  V  C  R  Q 

           901 ----+----*----+----*----+----*----+----*----+----* 950
                S  K  Q  Q  L  E  E  E  E  K  K  A  L  Y  G  L  E
mph01246   703 GAGCAAGCAACAGCTGGAAGAAGAAGAGAAGAAAGCCCTGTATGGCCTGG 752
                |||||||| |||||||| || ||  |||||||||| ||||||||  |||
hk01650    901 AAGCAAGCAGCAGCTGGAGGAGGAGCAGAAGAAAGCACTGTATGGTTTGG 950
                S  K  Q  Q  L  E  E  E  Q  K  K  A  L  Y  G  L  E

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                 N  A  E  E  V  E  E  W  Q  V  T  C  G  K  F  L  
mph01246   753 AGAACGCCGAGGAAGTGGAAGAGTGGCAAGTGACATGTGGGAAGTTCCTG 802
               |    || ||||| ||||| |||||||||||    ||||||||||| |||
hk01650    951 AAGCTGCGGAGGACGTGGAGGAGTGGCAAGTCGTCTGTGGGAAGTTTCTG 1000
                 A  A  E  D  V  E  E  W  Q  V  V  C  G  K  F  L  

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
               A  I  N  A  T  N  M  S  C  A  C  P  R  S  P  G  G 
mph01246   803 GCCATCAATGCCACCAACATGTCCTGTGCTTGTCCTCGGAGCCCTGGGGG 852
               |||||||||||||| |||||||||||||||||||  ||||||||  ||||
hk01650   1001 GCCATCAATGCCACAAACATGTCCTGTGCTTGTCGCCGGAGCCCCAGGGG 1050
               A  I  N  A  T  N  M  S  C  A  C  R  R  S  P  R  G 

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                L  S  P  F  A  H  L  G  D  G  S  S  D  L  I  L  I
mph01246   853 CCTGTCCCCATTTGCCCATCTGGGAGATGGGTCTTCTGACCTCATCCTTA 902
               ||| |||||   ||||||  ||||||| |||||||||||||||||||| |
hk01650   1051 CCTCTCCCCGGCTGCCCACTTGGGAGACGGGTCTTCTGACCTCATCCTCA 1100
                L  S  P  A  A  H  L  G  D  G  S  S  D  L  I  L  I

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                 R  K  C  S  R  F  N  F  L  R  F  L  I  R  H  T  
mph01246   903 TCCGGAAGTGCTCCAGGTTCAACTTCCTGAGATTTCTCATCCGGCACACG 952
               ||||||| |||||||||||||| || ||||||||||||||| ||||||| 
hk01650   1101 TCCGGAAATGCTCCAGGTTCAATTTTCTGAGATTTCTCATCAGGCACACC 1150
                 R  K  C  S  R  F  N  F  L  R  F  L  I  R  H  T  

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
               N  Q  E  D  Q  F  D  F  T  F  V  E  V  Y  R  V  K 
mph01246   953 AACCAGGAGGACCAGTTCGACTTCACTTTCGTTGAAGTTTATCGAGTCAA 1002
               |||||| |||||||||| ||||||||||| |||||||||||||| |||||
hk01650   1151 AACCAGCAGGACCAGTTTGACTTCACTTTTGTTGAAGTTTATCGCGTCAA 1200
               N  Q  Q  D  Q  F  D  F  T  F  V  E  V  Y  R  V  K 

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                K  F  H  F  T  S  K  H  V  E  D  E  D  N  D  S  K
mph01246  1003 GAAATTCCACTTCACGTCGAAGCACGTGGAAGACGAGGACAATGACTCGA 1052
               ||||||||| || |||||||||||| |||| || |||||||  |||   |
hk01650   1201 GAAATTCCAGTTTACGTCGAAGCACATGGAGGATGAGGACAGCGACCTCA 1250
                K  F  Q  F  T  S  K  H  M  E  D  E  D  S  D  L  K

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                 E  Q  E  K  Q  K  F  G  K  I  C  K  D  R  P  S  
mph01246  1053 AGGAACAAGAGAAGCAGAAGTTTGGGAAGATCTGCAAGGACAGACCCTCT 1102
               ||||    | |||| ||   |||||| | || ||||    |   ||||| 
hk01650   1251 AGGAGGGGGGGAAGAAGCGCTTTGGGCACATTTGCAGCAGCCACCCCTCC 1300
                 E  G  G  K  K  R  F  G  H  I  C  S  S  H  P  S  

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
               C  T  C  S  A  S  R  S  S  W  N  C  D  G  E  V  M 
mph01246  1103 TGCACTTGCTCAGCCTCCAGAAGCTCCTGGAACTGCGACGGGGAAGTCAT 1152
               |||   ||| | | |||||  ||||||||||||||||||||||| ||| |
hk01650   1301 TGCTGCTGCACCGTCTCCAACAGCTCCTGGAACTGCGACGGGGAGGTCCT 1350
               C  C  C  T  V  S  N  S  S  W  N  C  D  G  E  V  L 

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                H  S  P  A  I  E  V  R  V  H  C  Q  L  V  R  L  F
mph01246  1153 GCACAGCCCGGCCATTGAGGTCAGGGTCCACTGCCAGCTGGTGCGCCTCT 1202
               ||||||||| ||||| |||||||| ||||||||||||||||| || ||||
hk01650   1351 GCACAGCCCTGCCATCGAGGTCAGAGTCCACTGCCAGCTGGTTCGACTCT 1400
                H  S  P  A  I  E  V  R  V  H  C  Q  L  V  R  L  F

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                 A  R  G  I  E  E   S  H  K  Q  E  P  Q  S  P    
mph01246  1203 TTGCTCGGGGAATCGAGGAAGAGTCATAAGCAAGAACCCCAAAGCCCAGG 1252
               |||| || ||||| || | ||| ||  |||| |||  | || |||  || 
hk01650   1401 TTGCACGAGGAATTGAAG.AGAATCCGAAGCCAGACTCACACAGCTGAGA 1449
                 A  R  G  I  E  E   N  P  K  P  D  S  H  S  *    

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mph01246  1253 AGCTGTCGGC.....CTTGAGCTCGGGGAGTGTGGAAATTACTTAAGAAA 1297
               ||| | || |     || || || ||  |||||| ||| || |||||| |
hk01650   1450 AGCCGGCGTCCTGCTCTCGAACTGGGAAAGTGTGAAAACTATTTAAGATA 1499

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mph01246  1298 AATTCGACAGACCAGTTATGTTGATATATCCATTTGAATTTAGAAATTTA 1347
               | |   |||||||| |||||||||||||| ||||| ||| ||||||||||
hk01650   1500 ATTATTACAGACCAATTATGTTGATATATACATTTAAATGTAGAAATTTA 1549

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mph01246  1348 TTTTTGATAGGTAAATCTTGGTTTTTAGAAAAGACAGCTTTGTCAACAGT 1397
               |||||||||| ||||||||| ||||   | || ||   |||||||||| |
hk01650   1550 TTTTTGATAGTTAAATCTTGATTTTAGAAGAAAACCCTTTTGTCAACAAT 1599

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mph01246  1398 TCTGTATCCATACCTGGTACCCTCGGCCC....CGCTTCCGAG....... 1436
               | ||| | ||||  ||| |   || |  |    ||| || | |       
hk01650   1600 TTTGTGTACATATTTGGCATTTTCAGTTCTGTACGCATCTGCGGGTTGCA 1649

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mph01246  1437 TCGCTTTTCACTTCTTCTCAGCAAATGGCACTTGCTGGTTCGGGGCATTG 1486
                | |    | |||  |||||||  |||   ||      || |||||| ||
hk01650   1650 GCCCACGCCGCTTACTCTCAGCGGATGCAGCTGCTCACTTGGGGGCACTG 1699

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mph01246  1487 GCTTCCTAGATTTTAGCCATGCCGACCGTGCATATTTCAAGACGGCCCCT 1536
               || || ||| ||||| | ||| | || ||| |  ||  || | ||||| |
hk01650   1700 GCCTCTTAGGTTTTAACGATGTCAACAGTGTAGTTTAGAAAATGGCCCGT 1749

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mph01246  1537 TAGTGGGCTACACTGCAATAATTTTTAGGGACATTATAATATGACTACGT 1586
               |||| ||||  | |||||||| | ||||||||||||||  ||  | ||| 
hk01650   1750 TAGT.GGCTCTATTGCAATAA.TGTTAGGGACATTATATGATTTCCACG. 1796

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mph01246  1587 CCCAGGAATCAGGTTACACCATCTGGTCACATGGGTAACAACCCGGTCAC 1636
                        ||||| |||||||||||   | || |  |  |   ||||||
hk01650   1797 .........CAGGTCACACCATCTGG..GCCTGAGGTAGCAGTGGGTCAC 1835

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mph01246  1637 CTTGACCCCTTTGGTGGGACTTCCTCTGGAATTGTCTGTGGCCAGGTTTG 1686
                |||| ||  || |  ||||||  |||| ||  || |||||||| |||| 
hk01650   1836 TTTGATCCACTTTGCAGGACTTATTCTGTAACGGTTTGTGGCCAAGTTTT 1885

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mph01246  1687 GGAAGGTAAATAGCTGTCTTGGCCTCCGCTTTACACACACCTTCATTTAC 1736
               || | ||   |   | |||| |||| |  || ||   |  |||| |||||
hk01650   1886 GGGAAGTGGTTGATTCTCTTTGCCTTCATTTCACCTTCCTCTTCGTTTAC 1935

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mph01246  1737 GATCAGGACGTCGCTACGTGGCCCTTGCTGCACACCACAACT..AACTCA 1784
               | | ||||| ||||| | ||  |||| |   ||    |||||  ||  ||
hk01650   1936 GGTTAGGACATCGCTGCTTGATCCTTACAATACTGTGCAACTGCAATGCA 1985

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mph01246  1785 GCGAGGTCTTCCGCACAGCCATGCCTGCAGAGCAGGGCCATGTCACAGCG 1834
                || || | | |     |  || |  |    |     ||| | ||  || 
hk01650   1986 ACGTGGCCCTGCTTCAGGTGATCCGCGGGAGGGGCCTCCACGCCAGCGCC 2035

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mph01246  1835 AGAAGACACCCAGGGTGACGTCTCATCCTCAGGATCCCCCACGTCTGCTG 1884
                | |       ||| ||  |   | ||| ||   | || ||   | || |
hk01650   2036 GGGA.......AGGCTGCTGGGGCCTCCACA.CCTGCCTCATCACGGCGG 2077

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mph01246  1885 CCATCACAGCCGCATCCCGTGAGACAATTCAGCAAAGCGCCCACTTGGAA 1934
               | |    |     |||| |   |     | | |   ||| |   |  |  
hk01650   2078 CGAGGCTACGACAATCCGGCTGGGAGCATGACCTTGGCGTCTGTTCTGGG 2127

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mph01246  1935 GCTTCATTCTGTCAGCCCTGGTAGCCTGCACACCCTGGCCAAGGCAGTCT 1984
                   ||     | ||| |||| |||  |||                || |
hk01650   2128 AGCACAGATGATAAGCTCTGGAAGCTGGCA..............GTGTGT 2163

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mph01246  1985 GAAGCACTGGCTAAGAGGAGGCTCCATTTGGAATCAAAGCACTTCTACAG 2034
                |||||||||| |         |   ||     | |||   |   |||  
hk01650   2164 AAAGCACTGGCAA........GTTTGTTACTGTTAAAATGTCAAATACCA 2205

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mph01246  2035 CTGGGTTTTGAAAGAGGGGGTGGCAGGGACAGAGAGTAACTGACACACAC 2084
                ||  || |                   |  ||    || ||    ||||
hk01650   2206 ATGCTTTAT...................ATCGACGCGAAGTGCTTAACAC 2236

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mph01246  2085 AGAGGGTACTCGGTGAGTTCGATACCACCCTCAACCTGACTGTCACCAGC 2134
               ||  ||   | || |   ||   |  |  ||          | || | | 
hk01650   2237 AGCCGGGCTTGGGGGCAGTCAGGAGGAAGCT.........GGCCATCCGT 2277

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mph01246  2135 GAATGGTGGGTGATCTCAGGTCACCCCCAGG..TACTCTGGTGCA.AGCC 2181
               | | |  |||      | || | ||| ||||  | ||||| ||||  |||
hk01650   2278 GGAGGAGGGGCCGGTCCTGGACTCCCGCAGGACTCCTCTGATGCAGGGCC 2327

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mph01246  2182 TTATGTCTACTC.CTGGGTCCACAT.........CCATTCTTCCGCACTG 2221
               | | ||||   | |  |||||| ||          | ||  | | |||||
hk01650   2328 TGAAGTCTGTACACGTGGTCCAGATTTGTCCTTGTCTTTTCTTCACACTG 2377

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mph01246  2222 TGGATTCTGTTCTTATTCATAGCTTTCTCCCTATCCATCA.......... 2261
                |   ||| |  ||||| |     || ||| | |    ||          
hk01650   2378 AGTTCTCTATATTTATTGAACATCTTGTCCTTTTAAGCCAGAGTAGTGTA 2427

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mph01246  2262 .....CGTCTTGGCT.......ATTTGCTCTGTCTCCACAAGGGGGCGCT 2299
                    ||||| || |        |||||   |   |||| | ||  ||||
hk01650   2428 AACTGCGTCTCGGATGTCTGTCTTTTGCCTCGAAGCCACGATGGATCGCT 2477

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mph01246  2300 AAGCTGCTCT...GGCCGAAGCCCTGGGCGCATGACCAGTTTTCCTCTGA 2346
                   | ||||   |  ||| | |   ||||         || | | | ||
hk01650   2478 GGTTTCCTCTGCAGCGCGAGGGCTCCGGCGACCAGAGGATTCTTCCCGGA 2527

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mph01246  2347 AGGCATTC........CCAACCCAGGGGCTTCTCGGCCACATACTATGGC 2388
               ||||||||        |   ||  ||  |  |||       ||||| | |
hk01650   2528 AGGCATTCCTGCCGCGCTCCCCGGGGCACCCCTCAATTGTGTACTACGTC 2577

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mph01246  2389 C.TGTGCTGTGTCTCCAGATGGATGCATCTGAAATGTGTATAAAAGGGTT 2437
               | |||   |||| |     ||    | |     |||| | |||    |||
hk01650   2578 CTTGTTTAGTGTGTATCCGTGCCCACGTAGATGATGTCTGTAACGTAGTT 2627

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mph01246  2438 TTATGTGAAATTCAGGCCTACACAGCTTAAACTTGACTTGCAAACGGGGA 2487
               || | ||||||    |  ||  | ||||||||||   |    || | |  
hk01650   2628 TTGTTTGAAATATGAGAATATGCGGCTTAAACTTTGATCTGTAAGGAGCG 2677

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mph01246  2488 AGGGCACTGACTGTTACAAGAGCTGGTTTTAGGTTCTGCACTGGGGGAAG 2537
                || |   | |  ||  |  |    ||         | | |  |  |  |
hk01650   2678 GGGCCGTGGCCGTTTGGAGCACGCTGTAGACACCGTTCCTCATGCTGCCG 2727

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mph01246  2538 TGTGCATCTCGTGCGGGTCCAGTTACTCGCTACAGAATTCTGCAGGCCAC 2587
                |||  | | |     |  |  ||| |   | ||   ||     |     
hk01650   2728 GGTGGGTTTTGCAGAAGCTCCCTTAGTGATTTCATGTTTAACAGGCAGCA 2777

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mph01246  2588 ACGGCTTTCTAGGTCCTCTTGCACTGACTTCTGTTTCGAGGCATACA.CA 2636
                |   ||||    |   || ||| ||| || | ||| || |||||||  |
hk01650   2778 TCCATTTTCAGAATTTCCTGGCATTGATTTATATTTTGAAGCATACAGGA 2827

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mph01246  2637 AAATCCTCTGTTTAGTATTCAGTCCCATCCGGA.....CGAAAGAGCAGC 2681
               || | |||  ||     || || |||| || ||      ||||| |||||
hk01650   2828 AACTTCTCGTTTCCTCGTTTAGCCCCACCCAGATCAGGTGAAAGGGCAGC 2877

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mph01246  2682 TGTAAAGGCGGCCATGTTCAGGGACCACTTTA.AAGGCAGTTGTGCGGCG 2730
               | ||| || ||   | || | ||||||| |||  ||  ||   || |   
hk01650   2878 TTTAATGGTGG...TTTTTATGGACCACATTATCAGAGAGCACTGTGCAA 2924

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mph01246  2731 GTGCTATTTAAGGATTGTCGAGTAGAAAGCTGGCTAGAAAGAGTAA..AT 2778
               |    ||      ||  |  |  | ||  |||| |  |||||||||  ||
hk01650   2925 GCCAAATGGTTCAATAATGAATGAAAATTCTGGGTGTAAAGAGTAAATAT 2974

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mph01246  2779 GAACTAGCAGTTTCTATCCAGATCTGTCCCTGGATGGGCAGAACCCAAAC 2828
               |  || ||  |||||| | |  | ||  ||||| |||  |||| ||||| 
hk01650   2975 GCCCTGGCTCTTTCTACCAATGTTTGCTCCTGGTTGGAAAGAAACCAAAG 3024

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mph01246  2829 GTGCCAGCCTAGCAGCTCTGTGAGTAGGTAGGCAGCCCTGGAGCAGCGTG 2878
                |   || |  || |||||                           |  |
hk01650   3025 ATTTAAGACGGGCTGCTCT..........................TCCAG 3048

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mph01246  2879 AGGGCCGATGCTCAGTTGTCCACCTCAATGTGGCCCCTCGCCCCCGGCAT 2928
               |  | |  |||     ||| | |  |||      ||   ||  |||||| 
hk01650   3049 ACTGGCTGTGCCTGCCTGTGCCCAGCAA......CCTGTGCAGCCGGCAG 3092

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mph01246  2929 TCCAGAGGGGGCTCAGGGCCCGAGGCAGCTGTGGGTGCCCCTGGATCTCA 2978
               |      || |       | | |||  ||||||| |||    ||  ||| 
hk01650   3093 TGTGCCTGGTGTC....ACGCCAGGAGGCTGTGGCTGCTGTGGGCCCTCT 3138

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mph01246  2979 GGAATTGCACTGTCCTCCAAGGACTC...............AGGTCTTCA 3013
               |||||||  ||   | | |||    |               | | ||| |
hk01650   3139 GGAATTGTGCTCCTCACAAAGTTTCCCCAAAAGGTTCTTCTAAGCCTTTA 3188

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mph01246  3014 CTGACCTTGCTACATGATACCC......ACGCCCTGGTCCACCCCTG... 3054
                || || || || ||| | |||       |||  |||  ||| ||||   
hk01650   3189 TTGTCCCTGGTAAATGTTTCCCGGCTGGGCGCGGTGGCTCACGCCTGTAA 3238

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mph01246  3055 .................................................. 3055
                                                                 
hk01650   3239 TCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTAAGGTCAGGAGT 3288

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mph01246  3055 .................................................. 3055
                                                                 
hk01650   3289 TTGAGATCAGCCTGCCCAACATGGTGAAACCTCGTCTCTACTAAAAATAC 3338

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mph01246  3055 ...............................................CCG 3057
                                                                |
hk01650   3339 ACAACTTAGCCAGTCTTGTTGGCGCACGCCTGTAATCTCAGCTACTAGGG 3388

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mph01246  3058 CTGCCAGGGCTGGAGGAGAGATGCAGTCAGAGGATGCTTTGCCGGT.... 3103
                 ||   ||| |||| |  | |  |  |  || | |   ||  |||    
hk01650   3389 ACGCTGAGGCAGGAGAATCGCTTGAACCCAAGAAAGAGGTGGAGGTTGCG 3438

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mph01246  3104 .................................................. 3104
                                                                 
hk01650   3439 GTGAGCCAAGATTGCGCCACTGCACTCCAGCCTGGGCAAACAGAGGGAGA 3488

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mph01246  3104 .................................................. 3104
                                                                 
hk01650   3489 CTCCATCGCCCCCCCCCAACAAAAAAAAAAGTTTCCCATACACTGGCCTG 3538

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mph01246  3104 ........................GCTTAGCAGTGCAAGCC......... 3120
                                       ||  | |||| || |||         
hk01650   3539 CCCCAAAACCCACTAACAATTTTAGCAAAACAGTCCAGGCCAAAGAGGAA 3588

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mph01246  3121 .................................................. 3121
                                                                 
hk01650   3589 GCATTTCATGTTCAATAAGAAACCCAGCCATTCCGCATGGCTGGTTCCTG 3638

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mph01246  3121 ..................................ACGCTCGGAATCTCCA 3136
                                                 ||  |  |||||||  
hk01650   3639 AGTGGCTCTGGTGATACTCTCCAGCCACCTGCTGACATTGAGAATCTCAG 3688

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mph01246  3137 ACCCCGGCGCAGTCATGGAGCATCATGAGTGTCAGACACTT.....AGGG 3181
               ||| |||  | |   | | |  |   | ||||| ||||| |       | 
hk01650   3689 ACCTCGGGACTGCTGTTGCG.GTACCGTGTGTCTGACACCTGCCAGCAGC 3737

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mph01246  3182 CCCTTGACACGGGTGTGCAGGATTGGGGGGGGGGGCGGCGTGCTGACATT 3231
               || |||  |   | | ||||||| |||| |   | |      | ||||||
hk01650   3738 CCTTTGCTATCTGCGCGCAGGATGGGGGTGACTGCC......CAGACATT 3781

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mph01246  3232 CACAAGCAGTAGAC....AGTCTTCATGATGCTTTTTAGATGCAATACCC 3277
               | |      ||| |    | |      |  || ||| ||||||   |  |
hk01650   3782 CCCGCTAGATAGGCTCTGATTTCCGGGGCAGCCTTTCAGATGCGGCAGAC 3831

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mph01246  3278 CAAACTTCCCGGGTCTTAGGTATTTTA..GGAGGAAAAAACAGGGGTAAA 3325
                 |     || |  |||  |  |||||  |||  ||||| |||  ||   
hk01650   3832 ATACAACACCTGTACTTTAGAGTTTTAAGGGAAAAAAAATCAGAAGTGCT 3881

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mph01246  3326 GGTTAGACAGTGGCAACTTAGGAT.CCTGTTAGGGTCTGG....CCCATG 3370
               ||||||| |||   ||||||||||  ||   |  | || |      | | 
hk01650   3882 GGTTAGATAGTAAAAACTTAGGATAACTTAGAAAGGCTAGTTTTAGCTTC 3931

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mph01246  3371 TTTTAACTCCCACTGGTGCATACCAATTAGGCAACAGTCATAAGCTGTAA 3420
                |||    | | |||||||| | |||||||    |||| ||    || | 
hk01650   3932 CTTTGTGGCTCCCTGGTGCAAAACAATTAG....CAGTTATGCAATGGAC 3977

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mph01246  3421 CTTATTTTTGTTTATGGAAACTAAGTAGTGGGAACGGGGACCGGGGAGCG 3470
               || ||| | ||||||   || |||| |||| |  || |            
hk01650   3978 CTGATTCTAGTTTATTCTAATTAAGAAGTGAGGCCGAG............ 4015

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mph01246  3471 GCTGGTTTCCCAGAGGATGCTTCAGCCAATGCAATCTCCTGGAGCTGGG. 3519
                             |  | | |     ||| ||||||   | | ||||| 
hk01650   4016 ...........TTTGACTTCGTTCCTGAATACAATCTTGAGTAACTGGGA 4054

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mph01246  3520 AGCACTGACTGGGAGCACTGACACGAGAATGGCCCAATTATGCCTCCTGG 3569
               |   |||| ||              || ||||||  ||| | | | ||  
hk01650   4055 AAGTCTGAGTG............AAAGGATGGCCTCATTCT.CTTTCTAA 4091

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mph01246  3570 TCTTGCTGGCTTCAAGATTAGAAAGTGGCA.TATTTGATCTGGTATGTTT 3618
               ||||||||| |||||||||||||| ||||| |||||||||||  ||||||
hk01650   4092 TCTTGCTGGTTTCAAGATTAGAAAATGGCATTATTTGATCTGAAATGTTT 4141

          4301 ----+----*----+----*----+----*----+----*--- 4343
mph01246  3619 GAGAAGACAAAAATAATAATAATAAAGTTACTTTGGGCAGACT 3661
               ||||||||         |  ||||||||||| ||||||||   
hk01650   4142 GAGAAGAC.........ACGAATAAAGTTAC.TTGGGCAG... 4171