FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0082.ptfa, 690 aa vs ./tmplib.26680 library 1768327 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.3060+/-0.00408; mu= 23.5793+/- 0.274 mean_var=69.2934+/-15.659, 0's: 0 Z-trim: 2 B-trim: 41 in 1/35 Lambda= 0.1541 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0646 ( 749 res) mpf01029 ( 749) 995 231 3.5e-61 >>mKIAA0646 ( 749 res) mpf01029 (749 aa) initn: 995 init1: 995 opt: 995 Z-score: 1190.7 bits: 230.9 E(): 3.5e-61 Smith-Waterman score: 995; 100.000% identity (100.000% ungapped) in 144 aa overlap (1-144:585-728) 10 20 30 mKIAA0 IVETSNQKGRRGLGLTLQGFDQELNVDWRD :::::::::::::::::::::::::::::: mKIAA0 MYNSVSQRLMAKMGFREGEGLGKYSQGRKDIVETSNQKGRRGLGLTLQGFDQELNVDWRD 560 570 580 590 600 610 40 50 60 70 80 90 mKIAA0 EPEPNACEQVSWFPECTTEIPDSREMSDWMVVGKRKMVIEDETEFCGEELLHSMLKCKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: mKIAA0 EPEPNACEQVSWFPECTTEIPDSREMSDWMVVGKRKMVIEDETEFCGEELLHSMLKCKSV 620 630 640 650 660 670 100 110 120 130 140 150 mKIAA0 FDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::: mKIAA0 FDILDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPLDSSGAREASP 680 690 700 710 720 730 160 170 180 190 200 210 mKIAA0 SDIDLLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYY mKIAA0 STCCGGRSGTQRALG 740 690 residues in 1 query sequences 1768327 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:51 2006 done: Mon Mar 27 10:11:52 2006 Scan time: 0.790 Display time: 0.010 Function used was FASTA [version 3.4t11 Apr 17, 2002]