FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1090.ptfa, 857 aa vs ./tmplib.26680 library 1768160 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.5279+/-0.00609; mu= 15.9265+/- 0.407 mean_var=175.0082+/-39.972, 0's: 0 Z-trim: 16 B-trim: 8 in 1/35 Lambda= 0.0969 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1420 ( 907 res) mfj05028 ( 907) 662 106 2.9e-23 mKIAA0388 ( 758 res) mbh00510 ( 758) 353 62 2.7e-10 mKIAA4065 ( 779 res) mpj03374 ( 779) 338 60 1.2e-09 mKIAA1076 ( 855 res) mbh01320 ( 855) 307 56 2.5e-08 mKIAA1876 ( 348 res) mpj00624 ( 348) 301 54 2.8e-08 mKIAA1506 ( 1520 res) mbg19167 (1520) 276 52 6.9e-07 mKIAA0339 ( 822 res) mph02448 ( 822) 271 51 8.1e-07 mKIAA0304 ( 1744 res) mbg06324 (1744) 275 52 8.2e-07 mKIAA4075 ( 1945 res) mbg09037 (1945) 211 43 0.00043 mKIAA1113 ( 1071 res) mpm06042 (1071) 206 42 0.00051 mKIAA1125 ( 1253 res) mbg01394 (1253) 183 39 0.0051 >>mKIAA1420 ( 907 res) mfj05028 (907 aa) initn: 414 init1: 368 opt: 662 Z-score: 509.9 bits: 105.5 E(): 2.9e-23 Smith-Waterman score: 662; 39.382% identity (41.129% ungapped) in 259 aa overlap (478-731:6-258) 450 460 470 480 490 500 mKIAA1 RVFKNALQEAEARFNEVKLQREARETQESERKP--PPYKHIKVNKPYGKVQIYTADISEI .:: : ::.:. : : :. .. : mKIAA1 HNQLYKKPDVPLYKKIRSNV-YVDVKPLSG--YEA 10 20 30 510 520 530 540 550 560 mKIAA1 PKCNCK-PTDENPCGSDSECLNRMLMFECHPQVCPAGEYCQNQCFTKRQYPET-KIIKTD :::: : :.. : ..:::::.. :: :..:: :: : :: . .... . . .... mKIAA1 TTCNCKKPDDDTRKGCGDDCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERFRAE 40 50 60 70 80 90 570 580 590 600 610 620 mKIAA1 GKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKYAHENDITHFYMLTIDKDRIIDAG ::::. .:. .. :.:. ::.::...:.: :. ..: : : :..:. .::. mKIAA1 EKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDH-YCLNLDSGMVIDSY 100 110 120 130 140 150 630 640 650 660 670 680 mKIAA1 PKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKT-V :: .::.::::.:::: ::.::: :.::.:. :.:::::::..::. .. :: . mKIAA1 RMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQL 160 170 180 190 200 210 690 700 710 720 730 740 mKIAA1 CRCGASNCSGFLGDRPKTSASLSSEEKGKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQ :.:: .: :..: . . .: :. ::..... :.:. :... ::.:. mKIAA1 CKCGFEKCRGIIGGKSQRMNGLPSH-KGSQSSS-THRKSARAKEKRKSKHKLKKRKGHPS 220 230 240 250 260 750 760 770 780 790 800 mKIAA1 LVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWHHCDVCGKPSTSFCHLCPNSFCKEHQDG mKIAA1 EEPSENINTPTRLTPQLQMKPMSNRERNFVLKHHVFLVRNWEKIHQKQEEVKHTRDIHSA 270 280 290 300 310 320 >>mKIAA0388 ( 758 res) mbh00510 (758 aa) initn: 335 init1: 171 opt: 353 Z-score: 277.1 bits: 62.2 E(): 2.7e-10 Smith-Waterman score: 360; 31.818% identity (36.493% ungapped) in 242 aa overlap (451-671:507-738) 430 440 450 460 470 480 mKIAA1 YWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFNEVKLQREARETQESERKP :. : :. : ...:... :: . .: mKIAA0 KQVFQFAVKESLILKLPTDELMNPAQKKKRKHRLWAAHCR--KIQLKKDNNSTQVYNYQP 480 490 500 510 520 530 490 500 510 520 530 mKIAA1 --PPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDEN--P-CGSDSECLNR-----MLM : . . : :.: .. : :.:.: .: : : ..: .. . . mKIAA0 CDHPDRPCDSTCPC----IMTQNFCE-KFCQCSPDCQNRFPGCRCKTQCNTKQCPCYLAV 540 550 560 570 580 540 550 560 570 mKIAA1 FECHPQV---CPAGEY-------CQNQCFTKRQYPETKIIK-TDGKGWGLVAKRDIRKGE :: :.. : :.:. :.: : .: . .. .: ::: :....:.: mKIAA0 RECDPDLCLTCGASEHWDCKVVSCKN-CSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNE 590 600 610 620 630 640 580 590 600 610 620 630 mKIAA1 FVNEYVGELIDEEECMARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPN :..:: ::::...: : : .... .. : ......: ..:: ::: :: ::: .:: mKIAA0 FISEYCGELISQDEADRRGK-VYDKYMSSF-LFNLNNDFVVDATRKGNKIRFANHSVNPN 650 660 670 680 690 700 640 650 660 670 680 690 mKIAA1 CETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPK : . :::: :.:.:: : :: :: :.: mKIAA0 CYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDVF 710 720 730 740 750 700 710 720 730 740 750 mKIAA1 TSASLSSEEKGKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSC >>mKIAA4065 ( 779 res) mpj03374 (779 aa) initn: 390 init1: 168 opt: 338 Z-score: 265.6 bits: 60.1 E(): 1.2e-09 Smith-Waterman score: 338; 32.402% identity (35.802% ungapped) in 179 aa overlap (503-671:588-759) 480 490 500 510 520 530 mKIAA1 TQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDENPCGSDSECLNRMLMFE ...: : :: :.. ..: . . : mKIAA4 HPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCRCKAQ----CNT-KQCPCYLAVRE 560 570 580 590 600 610 540 550 560 570 580 mKIAA1 CHPQVC---PAGEY-------CQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVN : :..: :... :.: . . . . . .: :::. : ..:.::.. mKIAA4 CDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFIS 620 630 640 650 660 670 590 600 610 620 630 640 mKIAA1 EYVGELIDEEECMARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCET :: ::.:...: : : .... . : ......: ..:: ::: :: ::: .::: . mKIAA4 EYCGEIISQDEADRRGK-VYDKYMCSF-LFNLNNDFVVDATRKGNKIRFANHSVNPNCYA 680 690 700 710 720 730 650 660 670 680 690 700 mKIAA1 LKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPKTSA :::: :.:.:: : .: :: :.: mKIAA4 KVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP 740 750 760 770 >>mKIAA1076 ( 855 res) mbh01320 (855 aa) initn: 291 init1: 214 opt: 307 Z-score: 241.8 bits: 55.8 E(): 2.5e-08 Smith-Waterman score: 307; 32.432% identity (33.520% ungapped) in 185 aa overlap (511-694:675-854) 490 500 510 520 530 540 mKIAA1 PPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDENPCGSDSECLNRMLMFECHPQVCPA .: . ::. . .: :. : . mKIAA1 DKKDKLRYLNSSRASTDEPPMDTQGMSIPAQPHASTRAGSERRSEQRRLL-SSFTGSCDS 650 660 670 680 690 700 550 560 570 580 590 mKIAA1 GEYCQNQC-FTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIK :: : :.. :. :. . ::: : . : :.: ::::. : . : : mKIAA1 DLLKFNQLKFRKKKL---KFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREK 710 720 730 740 750 760 600 610 620 630 640 650 mKIAA1 YAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVC ... : ::. .:.: :::: ::..::.::::.::: . ::... .. ... mKIAA1 RYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQ 770 780 790 800 810 820 660 670 680 690 700 710 mKIAA1 DIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPKTSASLSSEEKGKKAKKKTRR : .. :.:..:.. . . : : ::. :: : :. mKIAA1 HINVNEEITYDYKFP-IEDVKIPCLCGSENCRGTLN 830 840 850 720 730 740 750 760 770 mKIAA1 RRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWHHCDV >>mKIAA1876 ( 348 res) mpj00624 (348 aa) initn: 238 init1: 113 opt: 301 Z-score: 241.0 bits: 54.4 E(): 2.8e-08 Smith-Waterman score: 311; 30.566% identity (35.683% ungapped) in 265 aa overlap (475-710:70-325) 450 460 470 480 490 500 mKIAA1 GIGRVFKNALQEAEARFNEVKLQREARETQESERKPPPYKHIKVNKPYGKVQIYTADISE .:: : ::... : . ..: .:.. mKIAA1 PDKPVAVEKTVSRDIARGYERIPIPCVNAVDSELCPTNYKYVSQNCVTSPMNI-DRNITH 40 50 60 70 80 90 510 520 530 540 mKIAA1 IPKCNCK---PTDENPCGSDS-ECL----NRML----------MFECHPQVCPAGEYCQN . : : .. ::. : .: .:.: .:::. ..: . :.: mKIAA1 LQYCVCVDDCSSSTCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECN-HACSCWRNCRN 100 110 120 130 140 150 550 560 570 580 590 600 mKIAA1 QCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKYAHENDI . . . .. .:. :::. . .:: : :: :::::::.. : .: :.: mKIAA1 RVVQNGLRARLQLYRTQDMGWGVRSLQDIPLGTFVCEYVGELISDSEADVR-----EEDS 160 170 180 190 200 210 610 620 630 640 650 660 mKIAA1 THFYMLTIDKD-RIIDAGPKGNYSRFMNHSCQPNCETLK-WTVNGD---TRVGLFAVCDI : . . : . ::: :: :::.:: :.:: .. . . : :...:.. : mKIAA1 YLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMSHQDLRFPRIAFFSTRLI 220 230 240 250 260 270 670 680 690 700 710 mKIAA1 PAGTELTFNYN---LDCLGNEKTVCRCGASNC---SGFLGDRPKTSASLSSEEKGKKAKK :: .: :.:. : :. . ::::.:.: :. :..: ..::. .:.: mKIAA1 QAGEQLGFDYGERFWDVKGKLFS-CRCGSSKCRHSSAALAQR-QASAAQEPQENGLPDTS 280 290 300 310 320 330 720 730 740 750 760 770 mKIAA1 KTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWH mKIAA1 SAAAADPPLILMKCGFAF 340 >>mKIAA1506 ( 1520 res) mbg19167 (1520 aa) initn: 288 init1: 154 opt: 276 Z-score: 216.0 bits: 51.9 E(): 6.9e-07 Smith-Waterman score: 276; 34.351% identity (34.884% ungapped) in 131 aa overlap (565-694:1390-1519) 540 550 560 570 580 590 mKIAA1 PQVCPAGEYCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEEC .: :: : :::.: .: ::.: .: ..: mKIAA1 SKQFVHSKSSQYRRMKTEWKSNVYLARSRIQGLGLYAARDIEKHTMVIEYIGTII-RNEV 1360 1370 1380 1390 1400 1410 600 610 620 630 640 650 mKIAA1 MARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVG : . .:.. ::. .:.:..::: :. .:..:::: ::: . : . .. mKIAA1 ANRKEKLYESQNRGVYMFRMDNDHVIDATLTGGPARYINHSCAPNCVAEVVTFERGHKII 1420 1430 1440 1450 1460 1470 660 670 680 690 700 710 mKIAA1 LFAVCDIPAGTELTFNYNLDCLGNEKTV-CRCGASNCSGFLGDRPKTSASLSSEEKGKKA . . : : :: ..:..: ... . :.::: :: ... mKIAA1 ISSNRRIQKGEELCYDYKFDFEDDQHKIPCHCGAVNCRKWMN 1480 1490 1500 1510 1520 720 730 740 750 760 770 mKIAA1 KKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECP >>mKIAA0339 ( 822 res) mph02448 (822 aa) initn: 249 init1: 196 opt: 271 Z-score: 214.8 bits: 50.7 E(): 8.1e-07 Smith-Waterman score: 271; 35.156% identity (35.433% ungapped) in 128 aa overlap (567-694:695-821) 540 550 560 570 580 590 mKIAA1 VCPAGEYCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMA ::: : . : :.: ::::. : . mKIAA0 SAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADM 670 680 690 700 710 720 600 610 620 630 640 650 mKIAA1 RIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLF : : .. : :.. .:.: :::: :: .::.:: : ::: . :.... .. .. mKIAA0 REKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIY 730 740 750 760 770 780 660 670 680 690 700 710 mKIAA1 AVCDIPAGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPKTSASLSSEEKGKKAKKK . : . :.:..:.. : ..: : ::. .: : :. mKIAA0 SKQPIGVDEEITYDYKFP-LEDNKIPCLCGTESCRGSLN 790 800 810 820 720 730 740 750 760 770 mKIAA1 TRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWHH >>mKIAA0304 ( 1744 res) mbg06324 (1744 aa) initn: 377 init1: 178 opt: 275 Z-score: 214.6 bits: 51.8 E(): 8.2e-07 Smith-Waterman score: 275; 36.496% identity (37.037% ungapped) in 137 aa overlap (559-694:1608-1743) 530 540 550 560 570 580 mKIAA1 LMFECHPQVCPAGEYCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGEL . .. .: :: ::.: ::.: :: : . mKIAA0 LRSTRRATSLELPMAMRFRHLKKTSKEAVGVYRSAIHGRGLFCKRNIDAGEMVIEYSGIV 1580 1590 1600 1610 1620 1630 590 600 610 620 630 640 mKIAA1 IDEEECMARIKYAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVN : : :. . : ::. .: ..:: .:: .::.::::.::: . :. mKIAA0 IRSVLTDKREKFYDGKGIG-CYMFRMDDFDVVDATMHGNAARFINHSCEPNCFSRVIHVE 1640 1650 1660 1670 1680 1690 650 660 670 680 690 700 mKIAA1 GDTRVGLFAVCDIPAGTELTFNYNLDCL-GNEKTVCRCGASNCSGFLGDRPKTSASLSSE :. .. .::. : : :::..:.. ...: : :::. : ::. mKIAA0 GQKHIVIFALRRILRGEELTYDYKFPIEDASNKLPCNCGAKRCRRFLN 1700 1710 1720 1730 1740 710 720 730 740 750 760 mKIAA1 EKGKKAKKKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF >>mKIAA4075 ( 1945 res) mbg09037 (1945 aa) initn: 242 init1: 153 opt: 211 Z-score: 165.8 bits: 42.9 E(): 0.00043 Smith-Waterman score: 215; 23.219% identity (33.333% ungapped) in 379 aa overlap (60-415:279-565) 30 40 50 60 70 80 mKIAA1 VDVEDAPRKRLRADKHSLRKQRETITDKTARTSSYKAIEAASSLKSQAATKNLSDACKPL : .. : .. .. .. .. . :: :: mKIAA4 AAAAAAVAVVESMVTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKP- 250 260 270 280 290 300 90 100 110 120 130 140 mKIAA1 KKRNRASATASSALGFNKSSSPSASLTEHEVSDSPGDEPSESPYESADETQTEASVSSKK : .... . ::... . :.: . .: :. : . : .: . ...: : :: mKIAA4 -KPKKVAPLKIKLGGFGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKK 310 320 330 340 350 360 150 160 170 180 190 mKIAA1 SERGMAAKK--EYV-------------CQLCEKTGSLLLCEGPCCGAFHLACLG--LSRR . . :: : : :..:.. : ..::. : :.:..:: . . mKIAA4 LRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCD-TCPRAYHMVCLDPDMEKA 370 380 390 400 410 420 200 210 220 230 240 250 mKIAA1 PEGRFTCTECAS-GIHSCFVCKESKMEVKRCVVNQCGKFYHEACVKKYPLTVFESRGFRC :::...: .: . ::. :.: . :. :. mKIAA4 PEGKWSCPHCEKEGIQ-----WEAKED------NSEGE---------------------- 430 440 450 260 270 280 290 300 310 mKIAA1 PLHSCMSCHASNPSNPRPSKGKMMRCVRCPVAYHGGDACLAAGCSVIASNSIICTGHFTA .... : ::: mKIAA4 ---------------------EILEEV-------GGDP---------------------- 460 320 330 340 350 360 mKIAA1 RKGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLNI---EMPDGSWFCNDCRA-G .. :: . .: ::. :: ::::..::...: ::: :.:.: :.: : . mKIAA4 EEEDDHH----MEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 470 480 490 500 510 370 380 390 400 410 420 mKIAA1 KKLHFQDI-IWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQA : . : : :: : :. :. : .: .. :: . : :. :: mKIAA4 LKGKVQKILIW-KWGQPPS-PTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHC 520 530 540 550 560 570 430 440 450 460 470 480 mKIAA1 RVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFNEVKLQREARETQESERKPPPYKHI mKIAA4 SWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPKFAEMEERFYRY 580 590 600 610 620 630 >>mKIAA1113 ( 1071 res) mpm06042 (1071 aa) initn: 209 init1: 152 opt: 206 Z-score: 164.5 bits: 41.8 E(): 0.00051 Smith-Waterman score: 206; 37.778% identity (41.975% ungapped) in 90 aa overlap (288-368:808-897) 260 270 280 290 300 310 mKIAA1 SCHASNPSNPRPSKGKMMRCVRCPVAYHGGDACLAAGCS--VIASNSIICTGHFTAR--- ..: .: : : ... : : .:: mKIAA1 PLSTNLHLESELDTLTGLENHVKTEPTDISESCKQSGLSNLVNGKSPIRNLMHRSARIGG 780 790 800 810 820 830 320 330 340 350 360 mKIAA1 KGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDC---LNIEMPDGSWFCNDCR-AGK :. . : .:: ::..::.::::: :: .:: : . .:.:.:.:. :: :: mKIAA1 DGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 840 850 860 870 880 890 370 380 390 400 410 420 mKIAA1 KLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQARV mKIAA1 PEVEYDCDNMQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPVSIPNYYKI 900 910 920 930 940 950 857 residues in 1 query sequences 1768160 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:35:51 2006 done: Mon Mar 27 10:35:52 2006 Scan time: 0.900 Display time: 0.300 Function used was FASTA [version 3.4t11 Apr 17, 2002]