FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1534.ptfa, 493 aa vs ./tmplib.26680 library 1768524 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.9405+/-0.00544; mu= 10.8589+/- 0.364 mean_var=138.3627+/-32.972, 0's: 0 Z-trim: 5 B-trim: 91 in 1/35 Lambda= 0.1090 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1451 ( 429 res) mth01486 ( 429) 794 136 5.1e-33 mKIAA4128 ( 1002 res) mbf00283 (1002) 322 62 2e-10 mKIAA4220 ( 516 res) mia04077 ( 516) 300 58 1.4e-09 mKIAA0772 ( 324 res) mib22030 ( 324) 210 44 1.9e-05 mKIAA0704 ( 824 res) mbg11653 ( 824) 179 40 0.001 >>mKIAA1451 ( 429 res) mth01486 (429 aa) initn: 1250 init1: 772 opt: 794 Z-score: 685.2 bits: 136.0 E(): 5.1e-33 Smith-Waterman score: 1278; 44.789% identity (53.298% ungapped) in 451 aa overlap (93-493:1-429) 70 80 90 100 110 120 mKIAA1 EPRSFLGKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKPKGIKKPYNPILGE :.: :..::::::::::::.:::::::::: mKIAA1 RLKKVVKWYLSGFYKKPKGLKKPYNPILGE 10 20 30 130 140 150 160 170 180 mKIAA1 TFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSLSAL :::: :.::.:::.:::::::::::::.:::::::::::::.:::: ::::::::::::. mKIAA1 TFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAI 40 50 60 70 80 90 190 200 210 220 mKIAA1 LDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVD------------------ :.:.:.:::::: :.:..:::::::.::::::::.:::: :. mKIAA1 LEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSAILEFKLKP 100 110 120 130 140 150 230 240 250 mKIAA1 --------------------------------VFIKEESSGGTELFWTPSEEVRRQRLKR :::..... ..:.::.:. .... :: : mKIAA1 FLGSSDYVNQISGKLKLGKEVLATLEGHWDSEVFINDKKTDNSEIFWNPTPDIKQWRLIR 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA1 HTVLLEEQSELESERLWQHVTRAIREGDQHKATQEKSVLEEAQRQRAREHQQSLTPWKPQ ::: .:::...:::.:::.::.:: :: .::::: :::::::: ::... . : . mKIAA1 HTVKFEEQDDFESEKLWQRVTKAINAKDQTEATQEKYVLEEAQRQAARDRKTKTQEWVCK 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 LFLLDPLTQEWRYRYEDLSPWDPLKDIAQYEQDGILHTLQRETMSGQTTFLGSPDSRHKR :: ::::: ::.:.. : :::::.:. :.:.::...: .. .: ... : .:: mKIAA1 LFELDPLTGEWHYKFSDTRPWDPLNDMIQFEKDGVIQT----KVKHRTPMVSVPKMKHKP 280 290 300 310 320 380 390 400 410 420 430 mKIAA1 PSSDRRLRKASDQPSGHSQVTESSGSTPESCPDLSDEDFVPGGESPCPRCRREVHRLKML ..... :. ..: . .. .:::: .: .: : .. . : . mKIAA1 TRQQKKVVKGYSSP--EPDIQDSSGSEAQSV-------------KPSTRRKKGID-LGDI 330 340 350 360 370 440 450 460 470 480 490 mKIAA1 QEAVLSIQEAQQELHRHLSTMLSSTVRAGQAPAPSLLQNPRSWFLLCIFLTCQLFINYIL : .. ::...:.:..:.. .. . . . .:: . . . ...:.. ... :..::.:. mKIAA1 QSSIESIKQTQEEIKRNIMALRNHLLSS--TPATDYFLQQKDYFVIFLLILLQVIINFIF 380 390 400 410 420 mKIAA1 K : mKIAA1 K >>mKIAA4128 ( 1002 res) mbf00283 (1002 aa) initn: 333 init1: 134 opt: 322 Z-score: 279.6 bits: 62.2 E(): 2e-10 Smith-Waterman score: 322; 34.225% identity (36.158% ungapped) in 187 aa overlap (39-223:639-817) 10 20 30 40 50 60 mKIAA1 AQLMGSGHVPLPQLDETSQVETVSEENKSLMWVLLRQLRPGMDLSRVVLPTFVLEPRSFL .: .::. : :::.: .:. . :: . : mKIAA4 ILNGELTGGAFRNGRRTCLPAPCPDTSNINLWNILRN-NIGKDLSKVSMPVELNEPLNTL 610 620 630 640 650 660 70 80 90 100 110 120 mKIAA1 GKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKP-KGIKKPYNPILGETFRCR .: . . ...::..:. :::: :: :: . .::. . .. .::.::.::::..: mKIAA4 QHLCEEMEYSELLDKASETDDPYERMVLVAAFAVSGYCSTYFRAGSKPFNPVLGETYEC- 670 680 690 700 710 720 130 140 150 160 170 180 mKIAA1 WLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSLSALLDGKA . .. ...::::::::.:: . ... : . .: :.::.:.:. : : mKIAA4 ---IREDKGFRFFSEQVSHHPPISACHCESKN--FVFWQDIRWKNKFWGKSMEILPVGTL 730 740 750 760 770 780 190 200 210 220 230 240 mKIAA1 KLTFLNRKEEYTLTMPYAHC-RGILYGTMTMELGGKVDVFIKEESSGGTELFWTPSEEVR ..: : . .: . . : ..:: : .: :.: mKIAA4 NVT-LPKYGDYYVWNKVTTCIHNILSGRRWIEHYGEVTLRNTKSSVCICKLTFVKVNYWN 790 800 810 820 830 840 250 260 270 280 290 300 mKIAA1 RQRLKRHTVLLEEQSELESERLWQHVTRAIREGDQHKATQEKSVLEEAQRQRAREHQQSL mKIAA4 SNVNEVQGVVIDQEGKVVHRLFGKWHEGLYCGVAPSAKCIWRPGSLPTNYELYYGFTRFA 850 860 870 880 890 900 >>mKIAA4220 ( 516 res) mia04077 (516 aa) initn: 296 init1: 143 opt: 300 Z-score: 264.3 bits: 58.4 E(): 1.4e-09 Smith-Waterman score: 300; 28.870% identity (30.396% ungapped) in 239 aa overlap (21-254:106-337) 10 20 30 40 mKIAA1 AAQSRGFTAQLMGSGHVPLPQLDETSQVETVS---EENKSL-MWVLLRQL ::.::.. . . . : :: .: .... mKIAA4 TMPENLGHKRTGSNISGASSDVSLDEQYKHQLEETKKEKRTRIPYKPNYSLNLWSIMKNC 80 90 100 110 120 130 50 60 70 80 90 100 mKIAA1 RPGMDLSRVVLPTFVLEPRSFLGKLS-DYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGF : .::.. .:. :: :.: .:. : :: .::.::: .. .. : . .:.. mKIAA4 -IGKELSKIPMPVNFNEPLSMLQRLTEDLEYH-ELLDRAAKCENSLEQLCYVAAFTVSSY 140 150 160 170 180 190 110 120 130 140 150 160 mKIAA1 YKKPKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMS .::.::.:::::. : . :.. : ::::::::..: .. . :.:. . mKIAA4 STTVFRTSKPFNPLLGETFELDRL--EENGYR-SICEQVSHHPPAAAHHAES-KNGWTLR 200 210 220 230 240 170 180 190 200 210 220 mKIAA1 GSITAKSKFYGNSLSALLDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVDV : ::: :. :: . : . : . ..:: . ..:. : . .. .:..:. mKIAA4 QEIKITSKFRGKYLSIMPLGTIHCIFHSTGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDI 250 260 270 280 290 300 230 240 250 260 270 280 mKIAA1 FIKEESSGGTELFWTPSEEVRRQRLKRHTVLLEEQSELESERLWQHVTRAIREGDQHKAT ...... .: ..: :. .. : mKIAA4 -VNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMDCFKVQAAS 310 320 330 340 350 360 >>mKIAA0772 ( 324 res) mib22030 (324 aa) initn: 215 init1: 176 opt: 210 Z-score: 190.1 bits: 44.0 E(): 1.9e-05 Smith-Waterman score: 210; 40.230% identity (40.230% ungapped) in 87 aa overlap (139-225:11-97) 110 120 130 140 150 160 mKIAA1 PKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSI .:.::::::::.:::: . .. : . ::: mKIAA0 ELIREDLGFRFISEQVSHHPPISAFYSEGLNQDFRFHGSI 10 20 30 40 170 180 190 200 210 220 mKIAA1 TAKSKFYGNSLSALLDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVDVFIK : ::.:.:. : : : .:...: :: : : .... : . .: : :.. mKIAA0 YPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNH 50 60 70 80 90 100 230 240 250 260 270 280 mKIAA1 EESSGGTELFWTPSEEVRRQRLKRHTVLLEEQSELESERLWQHVTRAIREGDQHKATQEK mKIAA0 RTGDKCILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECLWGIDPASYESFKKQ 110 120 130 140 150 160 >>mKIAA0704 ( 824 res) mbg11653 (824 aa) initn: 157 init1: 89 opt: 179 Z-score: 159.0 bits: 39.6 E(): 0.001 Smith-Waterman score: 184; 22.300% identity (25.911% ungapped) in 287 aa overlap (39-321:559-809) 10 20 30 40 50 60 mKIAA1 AQLMGSGHVPLPQLDETSQVETVSEENKSLMWVLLRQLRPGMDLSRVVLPTFVLEPRSFL .: .::. : :::.:..:. . :: . : mKIAA0 LGPVLESSGEARSKRRTSLPAPGPNTSSVSLWSILRN-NIGKDLSKVAMPVELNEPLNTL 530 540 550 560 570 580 70 80 90 100 110 120 mKIAA1 GKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKP-KGIKKPYNPILGETFRC- .: . ...::..:. .: :: : . .:.. .. .. .::.::.::::..: mKIAA0 QRLCEELEYSELLDKASRIPSPLERMVYVAAFAISAYASSYFRAGSKPFNPVLGETYECI 590 600 610 620 630 640 130 140 150 160 170 180 mKIAA1 RWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSLSALLDGK : : .. :. ::: . :.::.:.:. . : mKIAA0 R----QDKGFQFF-AEQ------------------------MRWKNKFWGKSMEIVPIGT 650 660 670 190 200 210 220 230 240 mKIAA1 AKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVDVFIKEESSGGTELFWTPSEEVR ...:. ... . . ..:: : .: :..:. ...: .. . ... mKIAA0 THVTLPAFGDHFEWNKVTSCIHNILSGQRWIEHYGEIDIKNLNDDSCHCKVNFI---KAK 680 690 700 710 720 730 250 260 270 280 290 300 mKIAA1 RQRLKRHTV--LLEEQSELESERLWQHVTRAIREGDQHKATQEKSVLEEAQRQRAREHQQ . : . . ..: .::. . ..: : :.. : . .. :. mKIAA0 YWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGG---ASSSTCVWRANPMPKGYEQYY 740 750 760 770 780 790 310 320 330 340 350 360 mKIAA1 SLTPWKPQLFLLDPLTQEWRYRYEDLSPWDPLKDIAQYEQDGILHTLQRETMSGQTTFLG ..: . .: .:::.. mKIAA0 GFTQFALELNEMDPLSRSLLPPTDTRFRPDQR 800 810 820 493 residues in 1 query sequences 1768524 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:31 2006 done: Mon Mar 27 10:47:32 2006 Scan time: 0.710 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]