# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph00209.fasta.nr -Q ../query/mKIAA0123.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0123, 509 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918517 sequences Expectation_n fit: rho(ln(x))= 5.2811+/-0.000182; mu= 11.1713+/- 0.010 mean_var=69.5791+/-13.533, 0's: 30 Z-trim: 51 B-trim: 0 in 0/68 Lambda= 0.153757 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|14548120|sp|Q9DC61.1|MPPA_MOUSE RecName: Full=M ( 524) 3383 759.5 0 gi|74186550|dbj|BAE34758.1| unnamed protein produc ( 519) 3377 758.1 1.3e-216 gi|74148289|dbj|BAE36299.1| unnamed protein produc ( 524) 3372 757.0 2.7e-216 gi|51261241|gb|AAH79004.1| Peptidase (mitochondria ( 524) 3306 742.4 6.9e-212 gi|29840846|sp|Q10713.2|MPPA_HUMAN RecName: Full=M ( 525) 3155 708.9 8.4e-202 gi|48257293|gb|AAH33103.2| PMPCA protein [Homo sap ( 526) 3155 708.9 8.4e-202 gi|18605506|gb|AAH22949.1| PMPCA protein [Homo sap ( 521) 3144 706.5 4.5e-201 gi|85700444|sp|Q5R513.2|MPPA_PONAB RecName: Full=M ( 525) 3138 705.1 1.1e-200 gi|55732931|emb|CAH93153.1| hypothetical protein [ ( 525) 3129 703.1 4.6e-200 gi|122145345|sp|Q0P5M8.1|MPPA_BOVIN RecName: Full= ( 525) 3081 692.5 7.4e-197 gi|57091999|ref|XP_537796.1| PREDICTED: similar to ( 526) 3066 689.2 7.4e-196 gi|194226020|ref|XP_001498584.2| PREDICTED: peptid ( 531) 3050 685.6 8.7e-195 gi|127287|sp|P20069.1|MPPA_RAT RecName: Full=Mitoc ( 524) 3018 678.5 1.2e-192 gi|126302715|ref|XP_001372865.1| PREDICTED: simila ( 627) 3007 676.1 7.4e-192 gi|74211961|dbj|BAE29321.1| unnamed protein produc ( 464) 2990 672.3 7.9e-191 gi|149460565|ref|XP_001521013.1| PREDICTED: hypoth ( 513) 2915 655.7 8.8e-186 gi|67678243|gb|AAH97637.1| MGC114896 protein [Xeno ( 518) 2842 639.5 6.6e-181 gi|53133830|emb|CAG32244.1| hypothetical protein [ ( 519) 2828 636.4 5.7e-180 gi|224073813|ref|XP_002187316.1| PREDICTED: peptid ( 483) 2752 619.5 6.4e-175 gi|220673190|emb|CAX14225.1| peptidase (mitochondr ( 517) 2724 613.3 5e-173 gi|123228054|emb|CAM20314.1| peptidase (mitochondr ( 441) 2717 611.7 1.3e-172 gi|55250627|gb|AAH85400.1| Peptidase (mitochondria ( 517) 2715 611.3 2e-172 gi|26346078|dbj|BAC36690.1| unnamed protein produc ( 441) 2711 610.4 3.3e-172 gi|149039281|gb|EDL93501.1| peptidase (mitochondri ( 487) 2658 598.6 1.2e-168 gi|210128587|gb|EEA76264.1| hypothetical protein B ( 520) 2220 501.5 2.3e-139 gi|194383734|dbj|BAG59225.1| unnamed protein produ ( 394) 2178 492.1 1.2e-136 gi|215502684|gb|EEC12178.1| mitochondrial processi ( 530) 1949 441.4 2.9e-121 gi|198419079|ref|XP_002119957.1| PREDICTED: simila ( 524) 1876 425.2 2.1e-116 gi|212515675|gb|EEB17780.1| mitochondrial-processi ( 556) 1852 419.9 9e-115 gi|156545665|ref|XP_001604153.1| PREDICTED: simila ( 542) 1846 418.5 2.2e-114 gi|91091652|ref|XP_971071.1| PREDICTED: similar to ( 529) 1835 416.1 1.2e-113 gi|210128444|gb|EEA76121.1| hypothetical protein B ( 509) 1810 410.5 5.3e-112 gi|190622288|gb|EDV37812.1| GF11230 [Drosophila an ( 555) 1792 406.6 9.1e-111 gi|190662419|gb|EDV59611.1| GG10696 [Drosophila er ( 556) 1771 401.9 2.3e-109 gi|194175647|gb|EDW89258.1| GE23498 [Drosophila ya ( 556) 1769 401.5 3.1e-109 gi|194124799|gb|EDW46842.1| GM20744 [Drosophila se ( 556) 1769 401.5 3.1e-109 gi|194192517|gb|EDX06093.1| GD10210 [Drosophila si ( 556) 1769 401.5 3.1e-109 gi|108882534|gb|EAT46759.1| mitochondrial processi ( 546) 1768 401.2 3.6e-109 gi|193902331|gb|EDW01198.1| GH20583 [Drosophila gr ( 555) 1761 399.7 1.1e-108 gi|194110504|gb|EDW32547.1| GL10384 [Drosophila pe ( 555) 1755 398.4 2.7e-108 gi|54636645|gb|EAL26048.1| GA21285 [Drosophila pse ( 555) 1755 398.4 2.7e-108 gi|7304131|gb|AAF59168.1| CG8728 [Drosophila melan ( 556) 1755 398.4 2.7e-108 gi|157015024|gb|EAA12324.3| AGAP008086-PA [Anophel ( 510) 1754 398.1 2.9e-108 gi|194159640|gb|EDW74541.1| GK21348 [Drosophila wi ( 559) 1752 397.7 4.3e-108 gi|193909277|gb|EDW08144.1| GI19728 [Drosophila mo ( 554) 1748 396.8 7.9e-108 gi|156217996|gb|EDO38902.1| predicted protein [Nem ( 487) 1686 383.0 9.8e-104 gi|198137688|gb|EDY69755.1| GA25237 [Drosophila ps ( 820) 1627 370.1 1.3e-99 gi|198137686|gb|EDY69753.1| GA25238 [Drosophila ps ( 820) 1625 369.6 1.8e-99 gi|194114983|gb|EDW37026.1| GL26015 [Drosophila pe ( 820) 1618 368.1 5.2e-99 gi|193659740|ref|XP_001945676.1| PREDICTED: simila ( 523) 1592 362.2 2e-97 >>gi|14548120|sp|Q9DC61.1|MPPA_MOUSE RecName: Full=Mitoc (524 aa) initn: 3383 init1: 3383 opt: 3383 Z-score: 4052.6 bits: 759.5 E(): 0 Smith-Waterman score: 3383; 100.000% identity (100.000% similar) in 509 aa overlap (1-509:16-524) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG ::::::::::::::::::::::::::::::::::::::::::::: gi|145 MATAVWAAARLLRGSAVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 QEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 QEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTA 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEI 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSY 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 LKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 LKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVE 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 RDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 RDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFS 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA 430 440 450 460 470 480 470 480 490 500 mKIAA0 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::::::::::::::::::::::::::::: gi|145 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR 490 500 510 520 >>gi|74186550|dbj|BAE34758.1| unnamed protein product [M (519 aa) initn: 3377 init1: 3377 opt: 3377 Z-score: 4045.5 bits: 758.1 E(): 1.3e-216 Smith-Waterman score: 3377; 99.804% identity (99.804% similar) in 509 aa overlap (1-509:11-519) 10 20 30 40 50 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDGQEKFE :::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GAAARLLRGSAVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDGQEKFE 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 TKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 DEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMTRM 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 AVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKNYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKNYY 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 TPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVERDMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVERDMSN 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 VSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLN 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 VLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELER 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 AKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLR 430 440 450 460 470 480 480 490 500 mKIAA0 GKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR ::::: ::::::::::::::::::::::::::::::::: gi|741 GKPAVPALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR 490 500 510 >>gi|74148289|dbj|BAE36299.1| unnamed protein product [M (524 aa) initn: 3372 init1: 3372 opt: 3372 Z-score: 4039.4 bits: 757.0 E(): 2.7e-216 Smith-Waterman score: 3372; 99.804% identity (99.804% similar) in 509 aa overlap (1-509:16-524) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG ::::::::::::::::::::::::::::::::::::::::::::: gi|741 MATAVWAAARLLRGSAVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 QEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTA ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|741 QEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHSLEKLAFSSTA 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEI 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSY 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 LKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVE 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 RDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFS 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA 430 440 450 460 470 480 470 480 490 500 mKIAA0 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::::::::::::::::::::::::::::: gi|741 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR 490 500 510 520 >>gi|51261241|gb|AAH79004.1| Peptidase (mitochondrial pr (524 aa) initn: 3306 init1: 3306 opt: 3306 Z-score: 3960.3 bits: 742.4 E(): 6.9e-212 Smith-Waterman score: 3306; 97.250% identity (99.607% similar) in 509 aa overlap (1-509:16-524) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG :.:::::.::::::::::::::::::::::::::::::::::::: gi|512 MATAVWAAARLLRGSAALCARPKFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDG 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 QEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|512 QEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFSSTA 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEI ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|512 RFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEI 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSY :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|512 EMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSY 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 LKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVE ::::::::::::::::::::::::::::::.:..:::::::.:::: ::::::::::::: gi|512 LKNYYTPDRMVLAGVGVEHEHLVECARKYLLGVQPAWGAPGAVDVDSSVAQYTGGIIKVE 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 RDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFS ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|512 RDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFS 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 RLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDL 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 VELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVA 430 440 450 460 470 480 470 480 490 500 mKIAA0 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR ::::::::::::::::::::::::::::::::.:.:::.::::: gi|512 SKMLRGKPAVAALGDLTDLPTYEHIQAALSSRDGRLPRTYRLFR 490 500 510 520 >>gi|29840846|sp|Q10713.2|MPPA_HUMAN RecName: Full=Mitoc (525 aa) initn: 3155 init1: 3155 opt: 3155 Z-score: 3779.3 bits: 708.9 E(): 8.4e-202 Smith-Waterman score: 3155; 92.490% identity (98.221% similar) in 506 aa overlap (4-509:20-525) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVD :.: ::: ::.::::::..::::::::::::::::.::::: gi|298 MAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVD 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEE :::::::::::::::::::::::::::::::::::::::::::: :::::::.::::::: gi|298 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 IEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHS .:::::::::::::::.::::::::::::::::.::::::::::::.::.:::.:::::: gi|298 VEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHS 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 YLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKV ::.:::::::::::::::::::::.::::::.:..::::. .::.::::::::::: :. gi|298 YLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKL 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMF :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|298 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMF 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|298 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVD 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 LVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRV :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::.::: gi|298 TVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRV 430 440 450 460 470 480 470 480 490 500 mKIAA0 ASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::::::::::::.::::..:.:::.::::: gi|298 ASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 490 500 510 520 >>gi|48257293|gb|AAH33103.2| PMPCA protein [Homo sapiens (526 aa) initn: 3155 init1: 3155 opt: 3155 Z-score: 3779.3 bits: 708.9 E(): 8.4e-202 Smith-Waterman score: 3155; 92.490% identity (98.221% similar) in 506 aa overlap (4-509:21-526) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATV :.: ::: ::.::::::..::::::::::::::::.:::: gi|482 KMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATV 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 DGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 DGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSS 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 TARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDE ::::::::::::::::::::::::::::::::::::::::::::: :::::::.:::::: gi|482 TARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 EIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLH :.:::::::::::::::.::::::::::::::::.::::::::::::.::.:::.::::: gi|482 EVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLH 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 SYLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIK :::.:::::::::::::::::::::.::::::.:..::::. .::.::::::::::: : gi|482 SYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAK 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 VERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGM .:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|482 LERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGM 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 FSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|482 FSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTV 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 DLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKR : :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::.:: gi|482 DTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKR 430 440 450 460 470 480 470 480 490 500 mKIAA0 VASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR ::::::::::::::::::::::::::::.::::..:.:::.::::: gi|482 VASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 490 500 510 520 >>gi|18605506|gb|AAH22949.1| PMPCA protein [Homo sapiens (521 aa) initn: 3144 init1: 3144 opt: 3144 Z-score: 3766.1 bits: 706.5 E(): 4.5e-201 Smith-Waterman score: 3144; 92.292% identity (98.024% similar) in 506 aa overlap (4-509:16-521) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVDGQEK :.: ::: ::.::::::..::::::::::::::::.::::::::: gi|186 VLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVDGQEK 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 FETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 FETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFD 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMT :::::::::::::::::::::::::::::::::::::::: :::::::.:::::::.::: gi|186 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 RMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKN ::::::::::::.::::::::::::::::.::::::::::::.::.:::.::::::::.: gi|186 RMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRN 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 YYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVERDM ::::::::::::::::::::.::::::.:..::::. .::.::::::::::: :.:::: gi|186 YYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDM 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 SNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLY :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|186 SNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLY 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 LNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVEL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::: ::: gi|186 LNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVEL 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 ERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKM ::::::: ::::::::::::::::::::::::.:::::::::::::::::::.::::::: gi|186 ERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKM 430 440 450 460 470 480 470 480 490 500 mKIAA0 LRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::: ::::::::::::.::::..:.:::.::::: gi|186 LRGKPAVAALCDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 490 500 510 520 >>gi|85700444|sp|Q5R513.2|MPPA_PONAB RecName: Full=Mitoc (525 aa) initn: 3138 init1: 3138 opt: 3138 Z-score: 3758.9 bits: 705.1 E(): 1.1e-200 Smith-Waterman score: 3138; 92.292% identity (97.826% similar) in 506 aa overlap (4-509:20-525) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVD :.: ::: ::.::::::..::::::::::::::::.::::: gi|857 MAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVD 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|857 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEE :::::::::::::::::::::::::::::::::::::::::::: :::::::.::::::: gi|857 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 IEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHS .:::::.:::::::::.::::::::::::::::.::::::::::::.::::::.:::::: gi|857 VEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHS 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 YLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKV ::.:::::::::::::::::::::.::::::.: .::::. .::.::::::::::: : gi|857 YLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGIAKR 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMF :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|857 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMF 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::. ::: gi|857 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSGTVD 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 LVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRV :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::.::: gi|857 AVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRV 430 440 450 460 470 480 470 480 490 500 mKIAA0 ASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::::::::::::.::::..:.:::.::::: gi|857 ASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 490 500 510 520 >>gi|55732931|emb|CAH93153.1| hypothetical protein [Pong (525 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 3748.1 bits: 703.1 E(): 4.6e-200 Smith-Waterman score: 3129; 92.277% identity (98.020% similar) in 505 aa overlap (5-509:21-525) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVD .: ::: ::.::::::..::::::::::::::::.::::: gi|557 MAAVVLAATRLLRGSGSWGSSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVD 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEE :::::::::::::::::::::::::::::::::::::::::::: :::::::.::::::: gi|557 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 IEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHS .:::::.:::::::::.::::::::::::::::.::::::::::::.::::::.:::::: gi|557 VEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHS 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 YLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKV ::.:::::::::::::::::::::.::::::.: .::::. .::.::::::::::: :. gi|557 YLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGIAKL 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMF :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|557 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMF 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::. ::: gi|557 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSGTVD 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 LVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRV :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::.::: gi|557 AVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRV 430 440 450 460 470 480 470 480 490 500 mKIAA0 ASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::::::::::::.::::..:.:::.::::: gi|557 ASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 490 500 510 520 >>gi|122145345|sp|Q0P5M8.1|MPPA_BOVIN RecName: Full=Mito (525 aa) initn: 3081 init1: 3081 opt: 3081 Z-score: 3690.6 bits: 692.5 E(): 7.4e-197 Smith-Waterman score: 3081; 89.505% identity (98.020% similar) in 505 aa overlap (5-509:21-525) 10 20 30 40 mKIAA0 AVLCARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFATVD .:::::.::.::::::..::::::::::::::::.::::: gi|122 MAAMVLAATRLLRGSGSWGRSRPRFGDPAYRRFSSGGAYPNIPLSSPLPGVPKPVFATVD 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSST 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 ARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEE ::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|122 ERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEE 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 IEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHS :::.::::::::::::::::::::::::.::::.::::::::::::.::..:.::.:::. gi|122 IEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMDRDVLHA 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 YLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKV ::.::::::::::::::::: .:::::::::.:. ::::. ..: ::::::::::::.:. gi|122 YLRNYYTPDRMVLAGVGVEHAQLVECARKYLLGTCPAWGTGAAVHVDRSVAQYTGGIVKL 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 ERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMF :::::::::::::.:::::::.::::::::: :::::::::::::::::::::::::::: gi|122 ERDMSNVSLGPTPFPELTHIMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAGGPGKGMF 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 SRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVD .::::::::::::::::::::::::::::::::::::::::::::::.:.::.::. ::: gi|122 TRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMAGTVD 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 LVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRV .:::::::::: ::::::::.:::::::::::::::.:::::::::.:::.::::::::: gi|122 VVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKLPHELCALIRDVKPEDIKRV 430 440 450 460 470 480 470 480 490 500 mKIAA0 ASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR :::::::::::::::::..::.:::.::::.::.:.::: ::::: gi|122 ASKMLRGKPAVAALGDLSELPAYEHVQAALASRDGRLPRVYRLFR 490 500 510 520 509 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:11:53 2009 done: Thu Mar 12 23:18:59 2009 Total Scan time: 954.870 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]