FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1470.ptfa, 484 aa vs ./tmplib.26680 library 1768533 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.0314+/-0.0047; mu= 19.6201+/- 0.316 mean_var=92.6544+/-21.307, 0's: 0 Z-trim: 7 B-trim: 42 in 1/35 Lambda= 0.1332 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0032 ( 938 res) mbg05393 ( 938) 350 78 3.7e-15 mKIAA1995 ( 1005 res) meh01075 (1005) 338 76 1.9e-14 mKIAA1593 ( 1058 res) mpm02342 (1058) 336 75 2.5e-14 mKIAA0393 ( 1871 res) mbg13346 (1871) 282 65 4.6e-11 mKIAA1563 ( 1652 res) mbg00767 (1652) 242 57 8.8e-09 mKIAA1417 ( 1167 res) mpm10268 (1167) 150 40 0.0015 >>mKIAA0032 ( 938 res) mbg05393 (938 aa) initn: 420 init1: 264 opt: 350 Z-score: 364.6 bits: 77.8 E(): 3.7e-15 Smith-Waterman score: 360; 34.225% identity (37.647% ungapped) in 187 aa overlap (66-249:46-218) 40 50 60 70 80 90 mKIAA1 TAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGR-KEVPKQQAAYRNL ::.. .: .. .: :: :.: . mKIAA0 AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS----- 20 30 40 50 60 70 100 110 120 130 140 150 mKIAA1 GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA :.: : :. . :..:. :::. .. : ...:: :. :::: .: : :. mKIAA0 ------PQRVRSLEGIPLAQVAAGG--AHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 80 90 100 110 120 160 170 180 190 200 210 mKIAA1 PRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-Y : .. : . .: .::..:: .:: .:.::.:: .. :::: . .: : .: ... mKIAA0 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV-NPRRVLEL 130 140 150 160 170 180 220 230 240 250 260 270 mKIAA1 NGQPITKMACGAEFSM-LMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR :. .:..::: . .. :. .: .:.::: :::: mKIAA0 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQ 190 200 210 220 230 240 280 290 300 310 320 330 mKIAA1 RVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE mKIAA0 LSARADRFKYRVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWR 250 260 270 280 290 300 >>mKIAA1995 ( 1005 res) meh01075 (1005 aa) initn: 485 init1: 165 opt: 338 Z-score: 351.8 bits: 75.6 E(): 1.9e-14 Smith-Waterman score: 368; 25.543% identity (30.719% ungapped) in 368 aa overlap (83-416:357-696) 60 70 80 90 100 mKIAA1 TKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWG-----PHRYGCL :.: .. :. .:: :.. . mKIAA1 PLLRTRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVI 330 340 350 360 370 380 110 120 130 140 150 160 mKIAA1 -SGVRVRTVVSGSCAAHSLLITTEGKLWSW-----GRNEKGQLGHGDTKRVEAPRLIEAL :: .: : .:. .: ..:.: .:..: : . .::::::: . :. .: : mKIAA1 KSGCSARQVCAGN--THFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL 390 400 410 420 430 440 170 180 190 200 210 mKIAA1 SHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDA-VPSPAQI-MYNGQPIT . .:: ..:: . :. .:: :...::: . .: .:. . . : : :. .. ..:. mKIAA1 QGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 450 460 470 480 490 500 220 230 240 250 260 270 mKIAA1 KMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIE ...:: . ... . ..::.:: :::.:: .:. . . ::.. ::. mKIAA1 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT-PQRVD-----VPK------- 510 520 530 540 550 280 290 300 310 320 330 mKIAA1 KTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE--------QKD ... : :: . :..: .. .:.. :.. ...:: . . mKIAA1 -----------ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 560 570 580 590 600 340 350 360 370 380 mKIAA1 EMVPR-----LVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSREST-MYPKA . :: :.: ..: : : : . :..: : :. .: .. .. .. : : mKIAA1 HEVPYTTSFTLAKQLSF--YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 610 620 630 640 650 390 400 410 420 430 mKIAA1 VQ------DLCGWRIRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQ . : : .. ..:: :.:.:.. : .:: mKIAA1 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 660 670 680 690 700 710 440 450 460 470 480 mKIAA1 EVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL mKIAA1 SWPRPIFGSLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGGIGG 720 730 740 750 760 770 >>mKIAA1593 ( 1058 res) mpm02342 (1058 aa) initn: 646 init1: 266 opt: 336 Z-score: 349.5 bits: 75.2 E(): 2.5e-14 Smith-Waterman score: 443; 28.571% identity (32.237% ungapped) in 343 aa overlap (101-434:34-346) 80 90 100 110 120 130 mKIAA1 FGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTE :.: . . .:: : : :.... . mKIAA1 TKVIPSMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDD 10 20 30 40 50 60 140 150 160 170 180 190 mKIAA1 GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGE : ... : :. ::::: ... :. . ::. . :: .:::. :::::.: :.:.:.: mKIAA1 GTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 70 80 90 100 110 200 210 220 230 240 mKIAA1 NKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLG .. ::::: .. . . : .: . :...::: :. .. .... .: .::::: mKIAA1 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 120 130 140 150 160 170 250 260 270 280 290 300 mKIAA1 HNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDS . ::. .... . :. .: .: . .:: :. :..:: mKIAA1 -------------LGIDCQ---KQTSPQLIKS----LLGIPFM---QVAAGGAHSFVLTL 180 190 200 210 310 320 330 340 350 360 mKIAA1 QKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFF . .:.:: . .:.:: ...:..:: :.: .. .. . : : . :... ::.: mKIAA1 SGAIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFT 220 230 240 250 260 270 370 380 390 400 410 420 mKIAA1 WGAT------NTSRESTMYPKAVQDLCGWRIRSLACGK--SSIIVAADESTISWGPSPTF .:: ..: . :. : .: : . ..:::. .: .: .. :.: . . mKIAA1 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN- 280 290 300 310 320 330 430 440 450 460 470 480 mKIAA1 GELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTP :.:: :. . ..: mKIAA1 GQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNC 340 350 360 370 380 390 >>mKIAA0393 ( 1871 res) mbg13346 (1871 aa) initn: 922 init1: 265 opt: 282 Z-score: 291.0 bits: 65.2 E(): 4.6e-11 Smith-Waterman score: 470; 28.329% identity (33.815% ungapped) in 413 aa overlap (99-481:994-1369) 70 80 90 100 110 120 mKIAA1 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVR-VRTVVSGSCAAHSLL- :: .. : :.:.. ... : : : . : mKIAA0 REQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR 970 980 990 1000 1010 1020 130 140 150 160 170 mKIAA1 -------------ITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAAC .:..:::.. : . :.:: : :. : .: :.:...: : : . mKIAA0 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS 1030 1040 1050 1060 1070 1080 180 190 200 210 220 230 mKIAA1 GRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSML : .: :::.. : :...:: : :.:: ::.. : : : .. .: :. : mKIAA0 GGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPC-DRPRVIESLRGIEVVDVAAGGAHSAC 1090 1100 1110 1120 1130 1140 240 250 260 270 280 290 mKIAA1 MDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVP . :.::..: .::.::: ::.. : .: :. ..: . ... mKIAA0 VTAAGDLYTWGKGRYGRLGH-SDSE----------D-QLKPK----LVEALQGHRVI--- 1150 1160 1170 1180 300 310 320 330 340 mKIAA1 NVVVRDVACGAN--HTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA :.:::.. .:: : .. :.::: : ::.::.. . :: .:. .. : :. mKIAA0 -----DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP--MKIDSLTGLGV 1190 1200 1210 1220 1230 350 360 370 380 390 400 mKIAA1 TQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACGKS ... : : :... :... :: . : . . :. :: : : .. ..: :. mKIAA0 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL 1240 1250 1260 1270 1280 1290 410 420 430 440 450 mKIAA1 SIIVAADESTI-SWGPSPTFGELGYGDHKPKSSTAAQE---VKTLDGIFSEQVAMGYSHS . .... . .:: . :.:: : ...: :. : .:.: ..:: : .:. mKIAA0 HCVCCTEDGEVYTWGDNDE-GQLGDG-----TTNAIQRPRLVAALQGKKVNRVACGSAHT 1300 1310 1320 1330 1340 1350 460 470 480 mKIAA1 LVIARDESEAEKEKLQRLPEYTPRTL :. : .. . .:: .: mKIAA0 LAW----STSKPASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHISELFCPCIPMFDL 1360 1370 1380 1390 1400 >>mKIAA1563 ( 1652 res) mbg00767 (1652 aa) initn: 252 init1: 208 opt: 242 Z-score: 250.0 bits: 57.4 E(): 8.8e-09 Smith-Waterman score: 242; 26.104% identity (28.261% ungapped) in 249 aa overlap (4-241:394-634) 10 20 30 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKRTAR :.:. : .. .. :. . .. mKIAA1 QVQPLVEEAVPDLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYSTA 370 380 390 400 410 420 40 50 60 70 80 90 mKIAA1 PATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRN : .. .:.:. : :: :. .. : : : . : . .:. .: .. .. : mKIAA1 PCETAAQSGSAS--TGPESLKD-LREEQVK---QESLQGKKSSSLMDIREEESEGGSRRL 430 440 450 460 470 100 110 120 130 140 mKIAA1 LGQNLW---GPHRYGCLSGVRVRTVV---SGSCAAHSLLITTEGKLWSWGRNEKGQLGHG .: .:. . :..:::: . : : .:: . . ..:.::....:::::: mKIAA1 SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHG 480 490 500 510 520 530 150 160 170 180 190 200 mKIAA1 DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPS :. : .. :. . .. : .:.:::: ..:...: : .:::: .. .:: mKIAA1 DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPR 540 550 560 570 580 590 210 220 230 240 250 260 mKIAA1 PAQIMY-NGQPITKMACGAEFSMLM----DCKGNLYSFGCPEYGQLGHNSDGKFIARAQR ... :: . ..: : ..:... : . .:: : mKIAA1 LSKVSSENG--VWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTKTPV 600 610 620 630 640 650 270 280 290 300 310 320 mKIAA1 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG mKIAA1 LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELASTERRFYSKLSEIKSQILRPL 660 670 680 690 700 710 >>mKIAA1417 ( 1167 res) mpm10268 (1167 aa) initn: 123 init1: 98 opt: 150 Z-score: 155.9 bits: 39.5 E(): 0.0015 Smith-Waterman score: 151; 24.779% identity (29.630% ungapped) in 226 aa overlap (173-386:53-253) 150 160 170 180 190 200 mKIAA1 QLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGL--GN ..::..::: : :..:: : . :::. mKIAA1 KHGVSLYMQDKEGLSPLDLLMKDRPTHVVFKDHTVVLTDDGCVYTFGLNMFHQLGIIPPP 30 40 50 60 70 80 210 220 230 240 250 mKIAA1 QTDAVPSPAQIMY-NGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGH--NSDG-KF . :: : : .:. : .: : .: .. . .:..: . ::::: . .: : mKIAA1 ASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVLWTREAVYTLGL-NGGQLGHLLDPNGEKC 90 100 110 120 130 140 260 270 280 290 300 310 mKIAA1 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPN----VVVRDVACGANHTLVLDSQKR .. ... : . .:. . ..:: . : . .. : : : :. .: mKIAA1 VTTPRQVS---ALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQCKKMATKQLNLKKV 150 160 170 180 190 320 330 340 350 360 370 mKIAA1 VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGA . : : : .. :. . :. .: : .:.. .: .: : . mKIAA1 LVSGGCMEY----------KVDPE-----HLTENGGQKI-----CVLAMDGAGRVFCWRS 200 210 220 230 380 390 400 410 420 430 mKIAA1 TNTSREST--MYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHK ..: .. ::. :. mKIAA1 ISSSLKQCRWAYPRQVSISDIALNRNEILFVTQDGEGFKGKWFEDKRKNSEKKADILPNL 240 250 260 270 280 290 484 residues in 1 query sequences 1768533 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:45:59 2006 done: Mon Mar 27 10:46:00 2006 Scan time: 0.700 Display time: 0.150 Function used was FASTA [version 3.4t11 Apr 17, 2002]