# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mph00114.fasta.nr -Q ../query/mKIAA1470.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1470, 484 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919088 sequences Expectation_n fit: rho(ln(x))= 5.1822+/-0.000184; mu= 11.7993+/- 0.010 mean_var=76.6188+/-14.975, 0's: 43 Z-trim: 58 B-trim: 0 in 0/65 Lambda= 0.146523 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=P ( 520) 3293 705.5 8.2e-201 gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=P ( 522) 3207 687.4 2.4e-195 gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taur ( 520) 3189 683.5 3.4e-194 gi|73950707|ref|XP_544537.2| PREDICTED: similar to ( 522) 3168 679.1 7.4e-193 gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sap ( 457) 3016 646.9 3.1e-183 gi|148681378|gb|EDL13325.1| regulator of chromosom ( 498) 2932 629.2 7.4e-178 gi|149253208|ref|XP_001477992.1| PREDICTED: hypoth ( 460) 2912 624.9 1.3e-176 gi|109475739|ref|XP_216557.4| PREDICTED: similar t ( 433) 2908 624.1 2.3e-176 gi|114554345|ref|XP_513117.2| PREDICTED: RCC1-like ( 488) 2870 616.1 6.5e-174 gi|126328935|ref|XP_001376745.1| PREDICTED: simila ( 439) 2820 605.5 9.1e-171 gi|118100936|ref|XP_417522.2| PREDICTED: hypotheti ( 464) 2804 602.1 9.8e-170 gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=P ( 513) 2759 592.6 7.8e-167 gi|221063272|gb|ACL98472.1| telophase disc 60 kDa ( 497) 2669 573.6 4e-161 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=P ( 495) 2646 568.7 1.2e-159 gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo sa ( 496) 2561 550.8 3e-154 gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo sa ( 496) 2534 545.1 1.6e-152 gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo sa ( 569) 2495 536.9 5.3e-150 gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taur ( 402) 2417 520.3 3.7e-145 gi|13436272|gb|AAH04933.1| RCC2 protein [Homo sapi ( 351) 2340 503.9 2.7e-140 gi|149410881|ref|XP_001506220.1| PREDICTED: simila ( 495) 2280 491.4 2.3e-136 gi|8655683|emb|CAB94882.1| hypothetical protein [H ( 333) 2214 477.3 2.7e-132 gi|210127883|gb|EEA75563.1| hypothetical protein B ( 484) 2077 448.5 1.9e-123 gi|210127877|gb|EEA75557.1| hypothetical protein B ( 484) 2073 447.6 3.3e-123 gi|149024444|gb|EDL80941.1| regulator of chromosom ( 292) 1989 429.7 5e-118 gi|149024443|gb|EDL80940.1| regulator of chromosom ( 296) 1984 428.6 1.1e-117 gi|60099075|emb|CAH65368.1| hypothetical protein [ ( 385) 1974 426.6 5.6e-117 gi|156227068|gb|EDO47874.1| predicted protein [Nem ( 487) 1564 340.0 8.2e-91 gi|198421783|ref|XP_002126864.1| PREDICTED: simila ( 475) 1563 339.8 9.4e-91 gi|66562328|ref|XP_392946.2| PREDICTED: similar to ( 486) 1492 324.8 3.1e-86 gi|156555775|ref|XP_001602946.1| PREDICTED: simila ( 486) 1478 321.8 2.4e-85 gi|212508386|gb|EEB12098.1| conserved hypothetical ( 487) 1463 318.7 2.2e-84 gi|194161421|gb|EDW76322.1| GK14718 [Drosophila wi ( 486) 1440 313.8 6.4e-83 gi|193904016|gb|EDW02883.1| GH10796 [Drosophila gr ( 491) 1422 310.0 9e-82 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anophele ( 474) 1419 309.4 1.4e-81 gi|54645520|gb|EAL34258.1| GA21568 [Drosophila pse ( 486) 1410 307.5 5.2e-81 gi|194147911|gb|EDW63609.1| GJ15738 [Drosophila vi ( 487) 1410 307.5 5.2e-81 gi|190616019|gb|EDV31543.1| GF14497 [Drosophila an ( 486) 1409 307.3 6e-81 gi|193912865|gb|EDW11732.1| GI17306 [Drosophila mo ( 486) 1404 306.2 1.2e-80 gi|194175233|gb|EDW88844.1| GE25855 [Drosophila ya ( 487) 1403 306.0 1.4e-80 gi|194132893|gb|EDW54461.1| GM18595 [Drosophila se ( 487) 1403 306.0 1.4e-80 gi|7297063|gb|AAF52332.1| CG9135, isoform A [Droso ( 487) 1399 305.1 2.6e-80 gi|190661369|gb|EDV58561.1| GG23921 [Drosophila er ( 487) 1398 304.9 3e-80 gi|193671838|ref|XP_001951667.1| PREDICTED: simila ( 477) 1369 298.8 2.1e-78 gi|47212325|emb|CAF91263.1| unnamed protein produc ( 416) 1364 297.7 3.9e-78 gi|108875404|gb|EAT39629.1| regulator of chromosom ( 478) 1356 296.0 1.4e-77 gi|108869688|gb|EAT33913.1| Bj1 protein, putative ( 484) 1314 287.2 6.6e-75 gi|108869687|gb|EAT33912.1| Bj1 protein, putative ( 484) 1304 285.1 2.9e-74 gi|115664230|ref|XP_001204258.1| PREDICTED: hypoth ( 301) 1150 252.3 1.3e-64 gi|221114598|ref|XP_002164315.1| PREDICTED: simila (1108) 1066 235.0 7.5e-59 gi|22531040|gb|AAM97024.1| unknown protein [Arabid ( 538) 966 213.6 1e-52 >>gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Prote (520 aa) initn: 3293 init1: 3293 opt: 3293 Z-score: 3761.5 bits: 705.5 E(): 8.2e-201 Smith-Waterman score: 3293; 100.000% identity (100.000% similar) in 484 aa overlap (1-484:37-520) 10 20 30 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKR :::::::::::::::::::::::::::::: gi|711 AAWEEPSSGNGTARAGPRRRGGPAGRKRERPERCSSSSGGGSSGDEDGPELDGAPGGGKR 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 TARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 TARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 DEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 DEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ 430 440 450 460 470 480 460 470 480 mKIAA1 VAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL :::::::::::::::::::::::::::::::::: gi|711 VAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL 490 500 510 520 >>gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Prote (522 aa) initn: 3207 init1: 3207 opt: 3207 Z-score: 3663.3 bits: 687.4 E(): 2.4e-195 Smith-Waterman score: 3207; 96.488% identity (99.587% similar) in 484 aa overlap (1-484:39-522) 10 20 30 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKR :::::::::::::::::: ::::::::::: gi|711 AAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKR 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 TARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA .:::::::::.:::..:::::::::::::::::::::::::::::::::::::::::::: gi|711 AARPATAGKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|711 YRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ :::::::::.::::.:: ::::::::::::.::::::::::::::::::::::::::::: gi|711 RVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQ 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|711 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 DEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|711 DEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ 430 440 450 460 470 480 460 470 480 mKIAA1 VAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL :::::::::::::::::.::::...::::.:::: gi|711 VAMGYSHSLVIARDESETEKEKIKKLPEYNPRTL 490 500 510 520 >>gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus] (520 aa) initn: 3008 init1: 3008 opt: 3189 Z-score: 3642.7 bits: 683.5 E(): 3.4e-194 Smith-Waterman score: 3189; 96.281% identity (99.174% similar) in 484 aa overlap (1-484:38-520) 10 20 30 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKR :::::::::::::::::: ::::::::::: gi|151 AAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKR 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 TARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA .:::: : ::.::::.:::::::::::::::::::::::::::::::::::::::::::: gi|151 AARPA-ATKAGGAAAVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ :::::::.:.::::.:: ::::::::::::.::::::::::::::::::::::::::::: gi|151 RVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQ 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|151 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 DEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|151 DEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|151 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQ 430 440 450 460 470 480 460 470 480 mKIAA1 VAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL ::::::::::::::::::::::...::::.:::: gi|151 VAMGYSHSLVIARDESEAEKEKIRKLPEYNPRTL 490 500 510 520 >>gi|73950707|ref|XP_544537.2| PREDICTED: similar to RCC (522 aa) initn: 2987 init1: 2987 opt: 3168 Z-score: 3618.7 bits: 679.1 E(): 7.4e-193 Smith-Waterman score: 3168; 95.455% identity (99.380% similar) in 484 aa overlap (1-484:40-522) 10 20 30 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKR :::::::::::::::::: ::::::::::: gi|739 AAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKR 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 TARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA .::::.: ::.:::..:::::::::::::::::::::::::::::::::::::::::::: gi|739 AARPAAA-KAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAA 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ :::::.:::.::::.:: ::::::::::::.::::.:::::::::::::::::::::::: gi|739 RVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTDAVPSPAQ 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|739 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 DEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|739 DEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|739 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQ 430 440 450 460 470 480 460 470 480 mKIAA1 VAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL :::::.:::::::::::.::::...::::.:::: gi|739 VAMGYAHSLVIARDESETEKEKIKKLPEYNPRTL 490 500 510 520 >>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens (457 aa) initn: 3016 init1: 3016 opt: 3016 Z-score: 3445.9 bits: 646.9 E(): 3.1e-183 Smith-Waterman score: 3016; 96.061% identity (99.781% similar) in 457 aa overlap (28-484:1-457) 10 20 30 40 50 60 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKRTARPATAGKAAGAAAIITEPEHTKERVKLE :::.:::::::::.:::..:::::::::::::: gi|148 GKRAARPATAGKAGGAAVVITEPEHTKERVKLE 10 20 30 70 80 90 100 110 120 mKIAA1 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC :::::::::::::::::::::::::.:::::::::::::::::::::.:::::::::::: gi|148 GSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT :::::::::::::::::::::::::::::::::::::::.::::.:: :::::::::::: gi|148 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 DTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSF .::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|148 ETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSF 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFA ::::::::::::::::::::::::::::::::::::::::::::::::..:::::::::: gi|148 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASRIYAGYTCSFA 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 VSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPT 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 FGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYT :::::::::::::::::::::::::::::::::::::::::::::::.::::...::::. gi|148 FGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKLPEYN 400 410 420 430 440 450 mKIAA1 PRTL :::: gi|148 PRTL >>gi|148681378|gb|EDL13325.1| regulator of chromosome co (498 aa) initn: 2911 init1: 2911 opt: 2932 Z-score: 3349.4 bits: 629.2 E(): 7.4e-178 Smith-Waterman score: 2932; 93.576% identity (96.360% similar) in 467 aa overlap (20-484:40-498) 10 20 30 40 mKIAA1 PERCSSSSGGGSSGDEDGPELDGA--PGGGKRTARPATAGKAAGAAAII : :: :.: .:. :: . . :. .. gi|148 GCCVSKATIFQRVSSAFVLEARIYILSVSGEWAGALVPAGERRSLRP----RLSVASLLV 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA1 TEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCL .. :... :::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SH--HSNQ--KLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCL 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA1 SGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIV 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA1 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEF 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA1 SMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA1 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA1 ATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVA 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA1 ADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESE 430 440 450 460 470 480 470 480 mKIAA1 AEKEKLQRLPEYTPRTL ::::::::::::::::: gi|148 AEKEKLQRLPEYTPRTL 490 >>gi|149253208|ref|XP_001477992.1| PREDICTED: hypothetic (460 aa) initn: 2912 init1: 2912 opt: 2912 Z-score: 3327.0 bits: 624.9 E(): 1.3e-176 Smith-Waterman score: 2912; 99.766% identity (100.000% similar) in 428 aa overlap (57-484:33-460) 30 40 50 60 70 80 mKIAA1 GGKRTARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPK .::::::::::::::::::::::::::::: gi|149 GLRYEGCQCTVVLVVGTAELAWAVRFLGLSLKLEGSKCKGQLLIFGATNWDLIGRKEVPK 10 20 30 40 50 60 90 100 110 120 130 140 mKIAA1 QQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGH 70 80 90 100 110 120 150 160 170 180 190 200 mKIAA1 GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP 130 140 150 160 170 180 210 220 230 240 250 260 mKIAA1 SPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD 190 200 210 220 230 240 270 280 290 300 310 320 mKIAA1 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 250 260 270 280 290 300 330 340 350 360 370 380 mKIAA1 AEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAV 310 320 330 340 350 360 390 400 410 420 430 440 mKIAA1 QDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGI 370 380 390 400 410 420 450 460 470 480 mKIAA1 FSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL :::::::::::::::::::::::::::::::::::::: gi|149 FSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL 430 440 450 460 >>gi|109475739|ref|XP_216557.4| PREDICTED: similar to RC (433 aa) initn: 2908 init1: 2908 opt: 2908 Z-score: 3322.8 bits: 624.1 E(): 2.3e-176 Smith-Waterman score: 2908; 99.766% identity (100.000% similar) in 427 aa overlap (58-484:7-433) 30 40 50 60 70 80 mKIAA1 GKRTARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQ :::::::::::::::::::::::::::::: gi|109 MQAWLEKLEGSKCKGQLLIFGATNWDLIGRKEVPKQ 10 20 30 90 100 110 120 130 140 mKIAA1 QAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPS 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 PAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 EQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQ 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 DLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF 340 350 360 370 380 390 450 460 470 480 mKIAA1 SEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL ::::::::::::::::::::::::.:::::::::::: gi|109 SEQVAMGYSHSLVIARDESEAEKERLQRLPEYTPRTL 400 410 420 430 >>gi|114554345|ref|XP_513117.2| PREDICTED: RCC1-like [Pa (488 aa) initn: 2856 init1: 2856 opt: 2870 Z-score: 3278.7 bits: 616.1 E(): 6.5e-174 Smith-Waterman score: 2870; 89.749% identity (94.351% similar) in 478 aa overlap (12-484:13-488) 10 20 30 40 50 mKIAA1 PERCSSSSGGGSSGDEDGPELDGAPGGGKRTAR----PATAGKAAGAAAI-ITEPEHTK ::: :: : : ..:: :.. ..: : . . : :.. gi|114 MPALFPRILPPRSSGLLHGPVLKGYVTKLLEAARLALWPGSLVSSALAPFLGLYCPLHAN 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 ERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRT .::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|114 --LKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRT 70 80 90 100 110 120 130 140 150 160 170 mKIAA1 VVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRN :::::::::::::::::::::::::::::::::::::::::::::.::::.:: :::::: gi|114 VVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRN 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA1 HTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCK ::::::.::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|114 HTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCK 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA1 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA1 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAG 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 YTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTIS 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA1 WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::.::::.. gi|114 WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIK 420 430 440 450 460 470 480 mKIAA1 RLPEYTPRTL .::::.:::: gi|114 KLPEYNPRTL 480 >>gi|126328935|ref|XP_001376745.1| PREDICTED: similar to (439 aa) initn: 2820 init1: 2820 opt: 2820 Z-score: 3222.2 bits: 605.5 E(): 9.1e-171 Smith-Waterman score: 2820; 95.327% identity (99.533% similar) in 428 aa overlap (57-484:11-438) 30 40 50 60 70 80 mKIAA1 GGKRTARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPK .:::::::.::::::::::::::::::::: gi|126 MGLHNGRLNSMKLEGSKCRGQLLIFGATNWDLIGRKEVPK 10 20 30 40 90 100 110 120 130 140 mKIAA1 QQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGH ::::::::::::::::::::::::.::::::: ::::::::::::::::::::::::::: gi|126 QQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGH 50 60 70 80 90 100 150 160 170 180 190 200 mKIAA1 GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP :::::::::.:::.::.:.:: ::::::::::::.:::::::::::::::::::::::.: gi|126 GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAIP 110 120 130 140 150 160 210 220 230 240 250 260 mKIAA1 SPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|126 SPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD 170 180 190 200 210 220 270 280 290 300 310 320 mKIAA1 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|126 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGH 230 240 250 260 270 280 330 340 350 360 370 380 mKIAA1 AEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAV ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|126 AEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAV 290 300 310 320 330 340 390 400 410 420 430 440 mKIAA1 QDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGI ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGI 350 360 370 380 390 400 450 460 470 480 mKIAA1 FSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL ..:::::::::::::::::::::::::..::::.:::: gi|126 YTEQVAMGYSHSLVIARDESEAEKEKLKKLPEYNPRTLS 410 420 430 484 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 10:48:11 2009 done: Sat Mar 14 10:55:05 2009 Total Scan time: 931.110 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]