FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4234.ptfa, 105 aa vs ./tmplib.26680 library 1768912 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.5514+/-0.00468; mu= 9.3941+/- 0.313 mean_var=113.3167+/-29.468, 0's: 0 Z-trim: 59 B-trim: 117 in 1/35 Lambda= 0.1205 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4229 ( 450 res) mfj48069 ( 450) 456 89 1.5e-19 mKIAA0326 ( 885 res) mib10041 ( 885) 454 89 2.7e-19 mKIAA1710 ( 461 res) mbg19468 ( 461) 449 88 3.5e-19 mKIAA1874 ( 435 res) mbg02924 ( 435) 439 86 1.1e-18 mKIAA1559 ( 504 res) mbp01052 ( 504) 437 86 1.6e-18 mKIAA0628 ( 508 res) msj08164 ( 508) 428 84 4.6e-18 mKIAA1431 ( 833 res) mfj27243 ( 833) 425 84 8.7e-18 mKIAA4205 ( 653 res) mfj21207 ( 653) 423 84 9.7e-18 mKIAA1954 ( 643 res) mpj01436 ( 643) 422 83 1.1e-17 mKIAA1588 ( 617 res) mbp00262 ( 617) 420 83 1.4e-17 mKIAA1852 ( 736 res) mej02019 ( 736) 419 83 1.7e-17 mKIAA1396 ( 481 res) mfj16154 ( 481) 416 82 1.9e-17 mFLJ00187 ( 488 res) mbg06919 ( 488) 416 82 1.9e-17 mKIAA1611 ( 558 res) mph00982 ( 558) 415 82 2.3e-17 mKIAA4218 ( 601 res) mpm12334 ( 601) 410 81 4.4e-17 mKIAA1141 ( 886 res) mef00011 ( 886) 405 81 1e-16 mKIAA4196 ( 437 res) mfj00049 ( 437) 399 79 1.4e-16 mKIAA1015 ( 831 res) mbh00453 ( 831) 398 79 2.3e-16 mKIAA1948 ( 463 res) mph00578 ( 463) 388 77 5.5e-16 mKIAA0961 ( 486 res) mph04182 ( 486) 387 77 6.3e-16 mKIAA0441 ( 699 res) mbp07087 ( 699) 381 76 1.6e-15 mKIAA0426 ( 508 res) mpm11025 ( 508) 377 76 2.2e-15 mKIAA4236 ( 919 res) mfj05191 ( 919) 376 76 3.4e-15 mKIAA4237 ( 519 res) mfj17080 ( 519) 366 74 8.2e-15 mFLJ00416 ( 522 res) msj08249 ( 522) 351 71 5e-14 mKIAA3006 ( 617 res) mbg05721 ( 617) 347 70 8.9e-14 mKIAA1020 ( 642 res) mpm09294 ( 642) 342 70 1.7e-13 mKIAA1388 ( 523 res) mbg09616 ( 523) 335 68 3.5e-13 mKIAA0924 ( 617 res) mbp20088 ( 617) 331 68 6.1e-13 mKIAA1703 ( 891 res) mfj09089 ( 891) 297 62 4.5e-11 mFLJ00107 ( 1371 res) mfj24090 (1371) 298 62 5.1e-11 mKIAA1572 ( 463 res) mfj40003 ( 463) 286 60 1.2e-10 mKIAA0760 ( 1400 res) mbg03730 (1400) 287 61 1.9e-10 mKIAA0569 ( 1248 res) mbg07960 (1248) 285 60 2.3e-10 mKIAA0414 ( 491 res) mbg10164 ( 491) 280 59 2.5e-10 mKIAA1951 ( 392 res) mid22012 ( 392) 275 58 4.1e-10 mKIAA4227 ( 539 res) mng13251 ( 539) 276 58 4.3e-10 mFLJ00134 ( 174 res) mbg08825 ( 174) 265 55 8.7e-10 mKIAA1993 ( 527 res) meh02016 ( 527) 270 57 8.7e-10 mKIAA0236 ( 1852 res) mbg02771 (1852) 261 56 5.2e-09 mKIAA0048 ( 622 res) mid07066 ( 622) 254 54 6.6e-09 mKIAA3011 ( 496 res) mph01327 ( 496) 243 52 2.2e-08 mKIAA0478 ( 1234 res) mib07095 (1234) 232 51 1.4e-07 mKIAA4222 ( 543 res) mkg04188 ( 543) 215 47 6.7e-07 mKIAA0352 ( 686 res) meh01314 ( 686) 212 47 1.1e-06 mKIAA0198 ( 506 res) mpm05258 ( 506) 210 46 1.2e-06 mKIAA0354 ( 674 res) mph01349 ( 674) 205 46 2.5e-06 mKIAA1538 ( 983 res) mbg10763 ( 983) 200 45 5.7e-06 mKIAA0296 ( 1541 res) mpf00724 (1541) 200 45 7.2e-06 mKIAA4190 ( 168 res) mfj21107 ( 168) 184 41 1.5e-05 >>mKIAA4229 ( 450 res) mfj48069 (450 aa) initn: 456 init1: 456 opt: 456 Z-score: 443.4 bits: 89.2 E(): 1.5e-19 Smith-Waterman score: 456; 56.190% identity (56.190% ungapped) in 105 aa overlap (1-105:301-405) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : :.:: .: ::.: :.:. :.:.:: ::: mKIAA4 KDCGKTFSCSSALILHQRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.: :. :..:.::::::.::.: :::: :.:. :: .::: ::::.:: : .:. : mKIAA4 KAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFT 340 350 360 370 380 390 100 mKIAA4 YKQSLKYHLRTHTGE :...: : : :::: mKIAA4 YSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLTVMGVKQKLSQSLC 400 410 420 430 440 450 >>mKIAA0326 ( 885 res) mib10041 (885 aa) initn: 454 init1: 454 opt: 454 Z-score: 438.7 bits: 89.3 E(): 2.7e-19 Smith-Waterman score: 454; 55.238% identity (55.238% ungapped) in 105 aa overlap (1-105:172-276) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : ::::. ::: : :.:. :::..: ::: mKIAA0 TPVVTASEPSLRELVQGRPSGAEKPYICNECGKSFSQWSKLLRHQRIHTGERPNTCSECG 150 160 170 180 190 200 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR ::: .. ::..:.: ::::.::.: .::: :. . .:..:::.::::.:: ::.: : : mKIAA0 KSFTQSSHLVQHQRTHTGEKPYKCPDCGKCFSWSSNLVQHQRTHTGEKPYKCTECEKAFT 210 220 230 240 250 260 100 mKIAA4 YKQSLKYHLRTHTGE . .: : :.:::: mKIAA0 QSTNLIKHQRSHTGEKPYKCGECRRAFYRSSDLIQHQATHTGEKPYKCPECGKRFGQNHN 270 280 290 300 310 320 >>mKIAA1710 ( 461 res) mbg19468 (461 aa) initn: 449 init1: 449 opt: 449 Z-score: 436.7 bits: 88.0 E(): 3.5e-19 Smith-Waterman score: 449; 54.286% identity (54.286% ungapped) in 105 aa overlap (1-105:274-378) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : ..:::.: : .: :::. :::. : ::: mKIAA1 EECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYRVHTGERPYKCDECG 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.: .. :..::: ::::.:::: :::. :.. ::..:::.::::.:: :: :.: : mKIAA1 KNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFS 310 320 330 340 350 360 100 mKIAA4 YKQSLKYHLRTHTGE .. : : . :::: mKIAA1 RSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSN 370 380 390 400 410 420 >>mKIAA1874 ( 435 res) mbg02924 (435 aa) initn: 979 init1: 439 opt: 439 Z-score: 427.6 bits: 86.2 E(): 1.1e-18 Smith-Waterman score: 439; 53.333% identity (53.333% ungapped) in 105 aa overlap (1-105:301-405) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : :.::. :.::.: :::. :::. : ::: mKIAA1 NECDKAFIHSSALIKHQRTHTGEKPYKCQDCGKAFSHCSSLTKHQRVHTGERPYECSECG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.: .. ::..:.::::::.::.: :::: :... .. .::: : :..:: : .:.: : mKIAA1 KTFSQSTHLVQHQRIHTGEKPYECNECGKTFSRSSNFAKHQRIHMGKKPYKCGECGKAFV 340 350 360 370 380 390 100 mKIAA4 YKQSLKYHLRTHTGE ....: : :::::: mKIAA1 HSSALIQHQRTHTGEKPFRCTECGKSFKSSPSLIRHQRTHTEEQP 400 410 420 430 >>mKIAA1559 ( 504 res) mbp01052 (504 aa) initn: 437 init1: 437 opt: 437 Z-score: 425.1 bits: 85.9 E(): 1.6e-18 Smith-Waterman score: 437; 50.476% identity (50.476% ungapped) in 105 aa overlap (1-105:148-252) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG :.:.: ..: :..: :.:. :.:. : ::: mKIAA1 TSEKVTYEKHSFLSEYQRVQNEEKFYECKECRKTFIRRSTLSQHLRIHTGEKPYKCKECG 120 130 140 150 160 170 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR . : .. ::..:...::::.::.: .::: :: ..: .::: ::::.:: : .:.: :: mKIAA1 QPFRQRAHLIRHHKLHTGEKPYECKDCGKAFTVLQELTQHQRLHTGEKPYECKECGKAFR 180 190 200 210 220 230 100 mKIAA4 YKQSLKYHLRTHTGE .:.: : : :::: mKIAA1 VHQQLARHQRIHTGEKPYECKECGKTFRQCTHLTRHQRLHTSEKLYECKECGKAFVCGPD 240 250 260 270 280 290 >>mKIAA0628 ( 508 res) msj08164 (508 aa) initn: 1057 init1: 428 opt: 428 Z-score: 416.6 bits: 84.4 E(): 4.6e-18 Smith-Waterman score: 428; 52.381% identity (52.381% ungapped) in 105 aa overlap (1-105:273-377) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : :.: ..: : .: :.:. ::: : ::: mKIAA0 NECGKSFIRSSSLIRHYQIHTEVKQYECRDCGKAFRHRSDLIEHQRIHTGERPFECQECG 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.:::. .:..:.::::::::: : ::::::.: .. .::: :.::. : :..:.: : mKIAA0 KAFIRSSKLIQHQRIHTGERPYVCNECGKRFSQTSNFTQHQRIHSGEKLYECNECGKAFF 310 320 330 340 350 360 100 mKIAA4 YKQSLKYHLRTHTGE .. : : . :::: mKIAA0 LSSYLIRHQKIHTGERVYECKECGKAFLQKAHLTEHQKIHTGDRPFECKDCGKAFIQSSK 370 380 390 400 410 420 >>mKIAA1431 ( 833 res) mfj27243 (833 aa) initn: 1089 init1: 425 opt: 425 Z-score: 411.7 bits: 84.2 E(): 8.7e-18 Smith-Waterman score: 425; 51.429% identity (51.429% ungapped) in 105 aa overlap (1-105:587-691) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : :::: .:.:..: :.:. :.:. : : mKIAA1 KECGKAFRQNIHLASHWRIHTGEKPFECGECGKSFSISSQLATHQRIHTGEKPYECKVCR 560 570 580 590 600 610 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.: .: :: .:.. ::::.::.: :::: :.: ::..:::.::::.:: : .:.: : mKIAA1 KAFTQKAHLAQHQKTHTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCLECGKAFG 620 630 640 650 660 670 100 mKIAA4 YKQSLKYHLRTHTGE ..: : : :::. mKIAA1 DNSSCTQHRRLHTGQRPYECVECGKTFKTKSSLICHRRCHTGEKPYECSACGKAFSHRQS 680 690 700 710 720 730 >>mKIAA4205 ( 653 res) mfj21207 (653 aa) initn: 423 init1: 423 opt: 423 Z-score: 410.8 bits: 83.7 E(): 9.7e-18 Smith-Waterman score: 423; 53.333% identity (53.333% ungapped) in 105 aa overlap (1-105:467-571) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : .::.. : : .: :.:. :.:. : .:: mKIAA4 KLCGKSFTQCASLKKHQRIHTGEKPYRCEECGRSFNHYSILGQHQRIHTGEKPYKCKQCG 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR ::: . : .:. :::::.::.:::::: :::. : .::: ::::.:: : .:.: : mKIAA4 KSFTQCSSLQKHQVIHTGEKPYRCAECGKSFTQNSTLSQHQRIHTGEKPYKCEECGKAFT 500 510 520 530 540 550 100 mKIAA4 YKQSLKYHLRTHTGE .::. : : :::: mKIAA4 QCSSLRKHQRIHTGEKPYKCEVCGRAFNCRSSFTKHKRIHTGEKPYKCKDCDKAFIHCTN 560 570 580 590 600 610 >>mKIAA1954 ( 643 res) mpj01436 (643 aa) initn: 422 init1: 422 opt: 422 Z-score: 410.0 bits: 83.5 E(): 1.1e-17 Smith-Waterman score: 422; 48.571% identity (48.571% ungapped) in 105 aa overlap (1-105:506-610) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : :.:...... .: :.:. :.:. : ::: mKIAA1 AGENSYGSEQTLLGQQSLSHPREKPYQCNVCGKAFKRSTSFIEHHRIHTGEKPYECNECG 480 490 500 510 520 530 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR ..: : : .:.: ::::.::.: .::: :.:. :..:.:.::::.:: :..:.. :: mKIAA1 EAFSRLSSLTQHERTHTGEKPYECIDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFR 540 550 560 570 580 590 100 mKIAA4 YKQSLKYHLRTHTGE : .:. : :::::: mKIAA1 KKTNLHDHQRTHTGEKPYACKECGRNFSRSSALTKHHRVHARNKLQES 600 610 620 630 640 >>mKIAA1588 ( 617 res) mbp00262 (617 aa) initn: 914 init1: 390 opt: 420 Z-score: 408.3 bits: 83.1 E(): 1.4e-17 Smith-Waterman score: 420; 51.429% identity (51.429% ungapped) in 105 aa overlap (1-105:294-398) 10 20 30 mKIAA4 CEKSFSEKSKLTNHCRVHSRERPHACPECG : ..: : : : :::. :::. : ::: mKIAA1 SSCGKAFNDPSALRSHTRTHLKEKPFDCSQCSNAFRTLSALKIHMRVHTGERPYKCDECG 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA4 KSFIRKHHLLEHRRIHTGERPYHCAECGKRFTQKHHLLEHQRAHTGERPYPCTHCAKCFR :.. :. ::. :.: :::::::.: .::: : . :: :: : ::::.:: ::.:.: :: mKIAA1 KAYGRSCHLIAHKRTHTGERPYECQDCGKAFQHPSHLKEHVRNHTGEKPYECTQCGKAFR 330 340 350 360 370 380 100 mKIAA4 YKQSLKYHLRTHTGE .:.... : ..: : mKIAA1 WKSNFNLHKKNHMVEKTYECKECGKSFSDLLSRRKHMRIHIVKKPVECHQCGKTFRNQSI 390 400 410 420 430 440 105 residues in 1 query sequences 1768912 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:06:00 2006 done: Mon Mar 27 11:06:01 2006 Scan time: 0.270 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]