# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpg02473.fasta.nr -Q ../query/mKIAA1240.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1240, 419 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920062 sequences Expectation_n fit: rho(ln(x))= 5.4286+/-0.000188; mu= 9.7281+/- 0.011 mean_var=83.3590+/-16.495, 0's: 43 Z-trim: 46 B-trim: 3973 in 3/62 Lambda= 0.140475 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|153791220|ref|NP_001093098.1| ATPase family, AA (1460) 2761 569.6 1.6e-159 gi|148669400|gb|EDL01347.1| mCG117533 [Mus musculu (1407) 2676 552.4 2.4e-154 gi|149050882|gb|EDM03055.1| rCG61344 [Rattus norve (1448) 2456 507.8 6.6e-141 gi|194220925|ref|XP_001501559.2| PREDICTED: simila (1419) 2421 500.7 8.8e-139 gi|193785084|dbj|BAG54237.1| unnamed protein produ ( 626) 2407 497.6 3.4e-138 gi|119621190|gb|EAX00785.1| hCG22387, isoform CRA_ ( 698) 2407 497.6 3.7e-138 gi|119621191|gb|EAX00786.1| hCG22387, isoform CRA_ ( 716) 2407 497.6 3.7e-138 gi|119903916|ref|XP_596986.3| PREDICTED: similar t ( 970) 2408 497.9 4.1e-138 gi|153792536|ref|NP_060022.1| ATPase family, AAA d (1458) 2407 497.9 6.4e-138 gi|126302524|sp|Q9ULI0.2|ATD2B_HUMAN RecName: Full (1458) 2407 497.9 6.4e-138 gi|73979811|ref|XP_858149.1| PREDICTED: similar to (1459) 2402 496.9 1.3e-137 gi|73979809|ref|XP_532888.2| PREDICTED: similar to (1459) 2402 496.9 1.3e-137 gi|224048811|ref|XP_002188706.1| PREDICTED: simila (1403) 1849 384.8 6.9e-104 gi|149408941|ref|XP_001509801.1| PREDICTED: simila (1305) 1427 299.2 3.6e-78 gi|118089085|ref|XP_419982.2| PREDICTED: similar t (1237) 1329 279.3 3.3e-72 gi|189533407|ref|XP_001336040.2| PREDICTED: simila ( 695) 442 99.4 2.8e-18 gi|47217255|emb|CAG01478.1| unnamed protein produc (1038) 317 74.2 1.6e-10 gi|149410162|ref|XP_001511946.1| PREDICTED: simila (1341) 308 72.5 6.9e-10 gi|210111174|gb|EEA58982.1| hypothetical protein B ( 665) 303 71.2 8.1e-10 gi|210086344|gb|EEA34766.1| hypothetical protein B (1430) 306 72.1 9.5e-10 gi|189530070|ref|XP_691497.3| PREDICTED: similar t (1307) 303 71.4 1.4e-09 gi|6650822|gb|AAF22032.1|AF118094_27 PRO2000 [Homo ( 362) 291 68.6 2.8e-09 gi|126322650|ref|XP_001381228.1| PREDICTED: simila (1391) 298 70.4 2.9e-09 gi|46255667|gb|AAH10686.1| ATAD2 protein [Homo sap ( 715) 291 68.8 4.6e-09 gi|159164177|pdb|2DKW|A Chain A, Solution Structur ( 131) 280 66.0 5.9e-09 gi|52545805|emb|CAH56229.1| hypothetical protein [ (1344) 291 69.0 7.5e-09 gi|74762365|sp|Q6PL18.1|ATAD2_HUMAN RecName: Full= (1390) 291 69.0 7.7e-09 gi|114621560|ref|XP_519938.2| PREDICTED: two AAA d (1352) 288 68.4 1.1e-08 gi|114621556|ref|XP_001148894.1| PREDICTED: two AA (1391) 288 68.4 1.2e-08 gi|118087363|ref|XP_418453.2| PREDICTED: similar t (1336) 285 67.8 1.7e-08 gi|73974426|ref|XP_850520.1| PREDICTED: similar to (1373) 280 66.8 3.6e-08 gi|75070913|sp|Q5RDX4.1|ATAD2_PONAB RecName: Full= (1091) 268 64.3 1.6e-07 gi|149066353|gb|EDM16226.1| ATPase family, AAA dom (1373) 268 64.4 1.9e-07 gi|194215079|ref|XP_001497238.2| PREDICTED: ATPase (1441) 268 64.4 2e-07 gi|114621558|ref|XP_001148750.1| PREDICTED: two AA (1261) 265 63.7 2.7e-07 gi|21618988|gb|AAH32211.1| ATPase family, AAA doma ( 198) 253 60.7 3.6e-07 gi|48735116|gb|AAH71261.1| Atad2 protein [Mus musc ( 254) 253 60.7 4.4e-07 gi|47077080|dbj|BAD18469.1| unnamed protein produc ( 544) 255 61.4 5.9e-07 gi|194035612|ref|XP_001926149.1| PREDICTED: ATPase (1328) 259 62.5 6.6e-07 gi|115782486|ref|XP_790486.2| PREDICTED: similar t (1433) 257 62.1 9.3e-07 gi|115754333|ref|XP_781419.2| PREDICTED: hypotheti ( 101) 242 58.2 1e-06 gi|78099817|sp|Q8CDM1.1|ATAD2_MOUSE RecName: Full= (1040) 253 61.2 1.3e-06 gi|148697350|gb|EDL29297.1| mCG7707 [Mus musculus] (1364) 253 61.3 1.6e-06 gi|198420090|ref|XP_002120918.1| PREDICTED: simila ( 450) 241 58.5 3.6e-06 gi|224046694|ref|XP_002199414.1| PREDICTED: ATPase (1293) 243 59.3 6.2e-06 gi|47224034|emb|CAG12863.1| unnamed protein produc (1318) 240 58.7 9.5e-06 gi|110757424|ref|XP_394969.3| PREDICTED: similar t (1263) 239 58.5 1.1e-05 gi|198443276|pdb|3DAI|A Chain A, Crystal Structure ( 130) 219 53.6 3.1e-05 gi|156555233|ref|XP_001603905.1| PREDICTED: simila (1096) 211 52.7 0.00049 gi|114622915|ref|XP_001166693.1| PREDICTED: simila ( 97) 196 48.9 0.00063 >>gi|153791220|ref|NP_001093098.1| ATPase family, AAA do (1460 aa) initn: 2761 init1: 2761 opt: 2761 Z-score: 3020.1 bits: 569.6 E(): 1.6e-159 Smith-Waterman score: 2761; 100.000% identity (100.000% similar) in 419 aa overlap (1-419:1042-1460) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|153 TKIDKHNYLTAKDFLQDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 1020 1030 1040 1050 1060 1070 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK 1080 1090 1100 1110 1120 1130 100 110 120 130 140 150 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC 1140 1150 1160 1170 1180 1190 160 170 180 190 200 210 mKIAA1 HEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 HEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSSS 1200 1210 1220 1230 1240 1250 220 230 240 250 260 270 mKIAA1 LNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 LNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKIA 1260 1270 1280 1290 1300 1310 280 290 300 310 320 330 mKIAA1 LEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 LEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYRK 1320 1330 1340 1350 1360 1370 340 350 360 370 380 390 mKIAA1 LLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|153 LLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ 1380 1390 1400 1410 1420 1430 400 410 mKIAA1 SIYRHRKDYDKSQLVEEMERTVHMFETFL ::::::::::::::::::::::::::::: gi|153 SIYRHRKDYDKSQLVEEMERTVHMFETFL 1440 1450 1460 >>gi|148669400|gb|EDL01347.1| mCG117533 [Mus musculus] (1407 aa) initn: 2676 init1: 2676 opt: 2676 Z-score: 2927.2 bits: 552.4 E(): 2.4e-154 Smith-Waterman score: 2676; 100.000% identity (100.000% similar) in 406 aa overlap (1-406:1002-1407) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|148 TKIDKHNYLTAKDFLQDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 980 990 1000 1010 1020 1030 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK 1040 1050 1060 1070 1080 1090 100 110 120 130 140 150 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC 1100 1110 1120 1130 1140 1150 160 170 180 190 200 210 mKIAA1 HEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSSS 1160 1170 1180 1190 1200 1210 220 230 240 250 260 270 mKIAA1 LNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKIA 1220 1230 1240 1250 1260 1270 280 290 300 310 320 330 mKIAA1 LEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYRK 1280 1290 1300 1310 1320 1330 340 350 360 370 380 390 mKIAA1 LLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ 1340 1350 1360 1370 1380 1390 400 410 mKIAA1 SIYRHRKDYDKSQLVEEMERTVHMFETFL :::::::::::::::: gi|148 SIYRHRKDYDKSQLVE 1400 >>gi|149050882|gb|EDM03055.1| rCG61344 [Rattus norvegicu (1448 aa) initn: 1871 init1: 1871 opt: 2456 Z-score: 2686.1 bits: 507.8 E(): 6.6e-141 Smith-Waterman score: 2456; 90.215% identity (95.227% similar) in 419 aa overlap (1-417:1000-1416) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|149 TKIDKHNYLTAKDFLQDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 970 980 990 1000 1010 1020 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK ::::::::::::::::::::::::.:::::::::.::::::::::::::::::::::::: gi|149 EFNKLCEEIKEARIKRGLSVTAEQVTPHGAGARKSETRVEEAFRHKQRNPMDAWHNSANK 1030 1040 1050 1060 1070 1080 100 110 120 130 140 150 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYDHTEDRKLLENGEFEVSTDC 1090 1100 1110 1120 1130 1140 160 170 180 190 200 210 mKIAA1 HEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSSS ::::::::::::::::::::::::.::.:::::::::::::::::::::::::::::::: gi|149 HEENGEETGDLSMTNDESSCDIMDLDQSQRLNSGAGTKENFASTEEESSNESLLVHSSSS 1150 1160 1170 1180 1190 1200 220 230 240 250 260 270 mKIAA1 LNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKIA :::::::::::::::::::::::::: ::::.::::::::::..::: .::::::::: : gi|149 LNPEQTSKKEPFLKGTCLNGEASTDSFEGIPILECQNGRVLEAAPLPGAGEKSSSEQKTA 1210 1220 1230 1240 1250 1260 280 290 300 310 320 330 mKIAA1 LEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYRK ::::::::::: :: .:: :::::: ::.: .::::..::..:::.::: ::::::: gi|149 LEEQLKDKPETANERHGDDPEKLEVLGYSSNEI-DPGPDGDGKDAELDKEGACKVKKYRK 1270 1280 1290 1300 1310 1320 340 350 360 370 380 390 mKIAA1 LLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ :.::::: :::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|149 LILEQAKTTNLELVPEEPSEPVPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLSQ 1330 1340 1350 1360 1370 1380 400 410 mKIAA1 SIYRHRKDYDKSQLVEEMERTVHM--FETFL .:::::::::::::: : . :. ::: gi|149 CVYRHRKDYDKSQLVEGGE-SKHQWAFETAKSSFPNTSAVPDPSGPPDKDSGLFWQVQEG 1390 1400 1410 1420 1430 1440 >>gi|194220925|ref|XP_001501559.2| PREDICTED: similar to (1419 aa) initn: 1649 init1: 1649 opt: 2421 Z-score: 2647.9 bits: 500.7 E(): 8.8e-139 Smith-Waterman score: 2421; 87.857% identity (96.429% similar) in 420 aa overlap (1-419:1001-1419) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|194 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 980 990 1000 1010 1020 1030 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::::::.:::.::::::::::::::::::::::.::::.:: gi|194 EFNKLCEEIKEARIKRGLSVTAEQINPHGTGARKTETRVEEAFRHKQRNPMDVWHNSTNK 1040 1050 1060 1070 1080 1090 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|194 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 1100 1110 1120 1130 1140 1150 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::::::::::.:::.::.:::::::::::::::.::: gi|194 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNNGAGAKESFASTEEESSNESLLVNSSS 1160 1170 1180 1190 1200 1210 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::.:::.:::::::.:::::::::: :::::::::::.. ::: . .:.: :::::: gi|194 SLNPQQTSRKEPFLKGSCLNGEASTDSFEGIPVLECQNGKA-EVVSFCGSGDKCSSEQKI 1220 1230 1240 1250 1260 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: :::.:: ::::.::::..:: :::::.:.:..:::.:::::::::: gi|194 LLEDQSKEKPETSNENHGDDPEKLETLECSNNEKLEPGPDVEAKDAELDKEGASKVKKYR 1270 1280 1290 1300 1310 1320 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.:::.: :.:::::::::::.::::::.:::.:::::::::::::.:::::::::::: gi|194 KLILEQTKTTSLELVPEEPSEPVPPLVVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 1330 1340 1350 1360 1370 1380 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|194 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 1390 1400 1410 >>gi|193785084|dbj|BAG54237.1| unnamed protein product [ (626 aa) initn: 1634 init1: 1634 opt: 2407 Z-score: 2637.4 bits: 497.6 E(): 3.4e-138 Smith-Waterman score: 2407; 87.857% identity (95.952% similar) in 420 aa overlap (1-419:208-626) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|193 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::.:::.::..::::::::::::::::::::::.::::::: gi|193 EFNKLCEEIKEARIKRGLSVTSEQINPHSTGARKTETRVEEAFRHKQRNPMDVWHNSANK 240 250 260 270 280 290 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|193 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 300 310 320 330 340 350 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::.:::::::.::::::::::::::::::::::.::: gi|193 CHEENGEETGDLSMTNDESSCDIMDLDQGQRLNNGAGTKENFASTEEESSNESLLVNSSS 360 370 380 390 400 410 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:: ::::.:::::::::: :::::::::::. :::: . :.:.: :::::: gi|193 SLNPEQTSRKETFLKGNCLNGEASTDSFEGIPVLECQNGK-LEVVSFCDSGDKCSSEQKI 420 430 440 450 460 470 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: .::.:: ::::.::::..:: ::: :.: :..:::.:::::::::: gi|193 LLEDQSKEKPETSTENHGDDLEKLEALECSNNEKLEPGSDVEVKDAELDKEGASKVKKYR 480 490 500 510 520 530 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::.:::.:::::::::::::.:::::::::::: gi|193 KLILEQAKTTSLELVPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 540 550 560 570 580 590 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|193 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 600 610 620 >>gi|119621190|gb|EAX00785.1| hCG22387, isoform CRA_a [H (698 aa) initn: 1634 init1: 1634 opt: 2407 Z-score: 2636.7 bits: 497.6 E(): 3.7e-138 Smith-Waterman score: 2407; 87.857% identity (95.952% similar) in 420 aa overlap (1-419:280-698) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|119 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 250 260 270 280 290 300 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::.:::.::..::::::::::::::::::::::.::::::: gi|119 EFNKLCEEIKEARIKRGLSVTSEQINPHSTGARKTETRVEEAFRHKQRNPMDVWHNSANK 310 320 330 340 350 360 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|119 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 370 380 390 400 410 420 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::.:::::::.::::::::::::::::::::::.::: gi|119 CHEENGEETGDLSMTNDESSCDIMDLDQGQRLNNGAGTKENFASTEEESSNESLLVNSSS 430 440 450 460 470 480 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:: ::::.:::::::::: :::::::::::. :::: . :.:.: :::::: gi|119 SLNPEQTSRKETFLKGNCLNGEASTDSFEGIPVLECQNGK-LEVVSFCDSGDKCSSEQKI 490 500 510 520 530 540 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: .::.:: ::::.::::..:: ::: :.: :..:::.:::::::::: gi|119 LLEDQSKEKPETSTENHGDDLEKLEALECSNNEKLEPGSDVEVKDAELDKEGASKVKKYR 550 560 570 580 590 600 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::.:::.:::::::::::::.:::::::::::: gi|119 KLILEQAKTTSLELVPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 610 620 630 640 650 660 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|119 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 670 680 690 >>gi|119621191|gb|EAX00786.1| hCG22387, isoform CRA_b [H (716 aa) initn: 1634 init1: 1634 opt: 2407 Z-score: 2636.6 bits: 497.6 E(): 3.7e-138 Smith-Waterman score: 2407; 87.857% identity (95.952% similar) in 420 aa overlap (1-419:298-716) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|119 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::.:::.::..::::::::::::::::::::::.::::::: gi|119 EFNKLCEEIKEARIKRGLSVTSEQINPHSTGARKTETRVEEAFRHKQRNPMDVWHNSANK 330 340 350 360 370 380 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|119 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 390 400 410 420 430 440 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::.:::::::.::::::::::::::::::::::.::: gi|119 CHEENGEETGDLSMTNDESSCDIMDLDQGQRLNNGAGTKENFASTEEESSNESLLVNSSS 450 460 470 480 490 500 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:: ::::.:::::::::: :::::::::::. :::: . :.:.: :::::: gi|119 SLNPEQTSRKETFLKGNCLNGEASTDSFEGIPVLECQNGK-LEVVSFCDSGDKCSSEQKI 510 520 530 540 550 560 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: .::.:: ::::.::::..:: ::: :.: :..:::.:::::::::: gi|119 LLEDQSKEKPETSTENHGDDLEKLEALECSNNEKLEPGSDVEVKDAELDKEGASKVKKYR 570 580 590 600 610 620 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::.:::.:::::::::::::.:::::::::::: gi|119 KLILEQAKTTSLELVPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 630 640 650 660 670 680 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|119 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 690 700 710 >>gi|119903916|ref|XP_596986.3| PREDICTED: similar to AT (970 aa) initn: 1647 init1: 1647 opt: 2408 Z-score: 2635.9 bits: 497.9 E(): 4.1e-138 Smith-Waterman score: 2408; 87.619% identity (95.000% similar) in 420 aa overlap (1-419:552-970) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|119 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 530 540 550 560 570 580 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::::::.:::.::::::::::::::::::::::.::.:::: gi|119 EFNKLCEEIKEARIKRGLSVTAEQINPHGTGARKTETRVEEAFRHKQRNPMDVWHSSANK 590 600 610 620 630 640 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD ::::::::::::::::::::::::::::::::.:::::::. : :::::::::::::::: gi|119 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEDDTKFTDYENHMEDRKLLENGEFEVSTD 650 660 670 680 690 700 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::::::::::.::.::::::::::::::::::..::: gi|119 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNNGASTKENFASTEEESSNESLLINSSS 710 720 730 740 750 760 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:::::: :::::::::: :::::::::::.. ::: .:.: ::::: gi|119 SLNPEQTSRKEPFLKEGCLNGEASTDSFEGIPVLECQNGKA-EVVSCCGSGDKCSSEQKT 770 780 790 800 810 820 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: :::.:: ::::.::::..:: :::::.: :..:::.:::::::::: gi|119 LLEDQSKEKPETSNENHGDDPEKLEALECSTNEKLEPGPDVEVKDAELDKEGASKVKKYR 830 840 850 860 870 880 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::::::.:::::::::::::.:::::::::::: gi|119 KLILEQAKTTSLELVPEEPSEPVPPLIVDHERLKKLLDLLVDKSNNLAVDQLERLYSLLS 890 900 910 920 930 940 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|119 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 950 960 970 >>gi|153792536|ref|NP_060022.1| ATPase family, AAA domai (1458 aa) initn: 1634 init1: 1634 opt: 2407 Z-score: 2632.4 bits: 497.9 E(): 6.4e-138 Smith-Waterman score: 2407; 87.857% identity (95.952% similar) in 420 aa overlap (1-419:1040-1458) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|153 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 1010 1020 1030 1040 1050 1060 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::.:::.::..::::::::::::::::::::::.::::::: gi|153 EFNKLCEEIKEARIKRGLSVTSEQINPHSTGARKTETRVEEAFRHKQRNPMDVWHNSANK 1070 1080 1090 1100 1110 1120 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|153 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 1130 1140 1150 1160 1170 1180 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::.:::::::.::::::::::::::::::::::.::: gi|153 CHEENGEETGDLSMTNDESSCDIMDLDQGQRLNNGAGTKENFASTEEESSNESLLVNSSS 1190 1200 1210 1220 1230 1240 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:: ::::.:::::::::: :::::::::::. :::: . :.:.: :::::: gi|153 SLNPEQTSRKETFLKGNCLNGEASTDSFEGIPVLECQNGK-LEVVSFCDSGDKCSSEQKI 1250 1260 1270 1280 1290 1300 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: .::.:: ::::.::::..:: ::: :.: :..:::.:::::::::: gi|153 LLEDQSKEKPETSTENHGDDLEKLEALECSNNEKLEPGSDVEVKDAELDKEGASKVKKYR 1310 1320 1330 1340 1350 1360 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::.:::.:::::::::::::.:::::::::::: gi|153 KLILEQAKTTSLELVPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 1370 1380 1390 1400 1410 1420 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|153 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 1430 1440 1450 >>gi|126302524|sp|Q9ULI0.2|ATD2B_HUMAN RecName: Full=ATP (1458 aa) initn: 1634 init1: 1634 opt: 2407 Z-score: 2632.4 bits: 497.9 E(): 6.4e-138 Smith-Waterman score: 2407; 87.857% identity (95.952% similar) in 420 aa overlap (1-419:1040-1458) 10 20 30 mKIAA1 DKDPGDKIIRHRACTLKDTAHAIIAAELDP :::::::::::::::::::::::::::::: gi|126 TKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGDKIIRHRACTLKDTAHAIIAAELDP 1010 1020 1030 1040 1050 1060 40 50 60 70 80 90 mKIAA1 EFNKLCEEIKEARIKRGLSVTAEQITPHGAGARKTETRVEEAFRHKQRNPMDAWHNSANK :::::::::::::::::::::.:::.::..::::::::::::::::::::::.::::::: gi|126 EFNKLCEEIKEARIKRGLSVTSEQINPHSTGARKTETRVEEAFRHKQRNPMDVWHNSANK 1070 1080 1090 1100 1110 1120 100 110 120 130 140 mKIAA1 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFTDYD-HTEDRKLLENGEFEVSTD :::::::::::::::::::::::::::::::::::::.::. :::::::::::::::::: gi|126 CAFRVRRKSRRRSQWGKGIIKKRKVNNLKKDEEDTKFADYENHTEDRKLLENGEFEVSTD 1130 1140 1150 1160 1170 1180 150 160 170 180 190 200 mKIAA1 CHEENGEETGDLSMTNDESSCDIMDMDQGQRLNSGAGTKENFASTEEESSNESLLVHSSS :::::::::::::::::::::::::.:::::::.::::::::::::::::::::::.::: gi|126 CHEENGEETGDLSMTNDESSCDIMDLDQGQRLNNGAGTKENFASTEEESSNESLLVNSSS 1190 1200 1210 1220 1230 1240 210 220 230 240 250 260 mKIAA1 SLNPEQTSKKEPFLKGTCLNGEASTDSSEGIPVLECQNGRVLEVVPLPDGGEKSSSEQKI ::::::::.:: ::::.:::::::::: :::::::::::. :::: . :.:.: :::::: gi|126 SLNPEQTSRKETFLKGNCLNGEASTDSFEGIPVLECQNGK-LEVVSFCDSGDKCSSEQKI 1250 1260 1270 1280 1290 1300 270 280 290 300 310 320 mKIAA1 ALEEQLKDKPETWNENRGDAAEKLEVLECSSSEKPEPGPDAEGKETELDREGASKVKKYR ::.: :.:::: .::.:: ::::.::::..:: ::: :.: :..:::.:::::::::: gi|126 LLEDQSKEKPETSTENHGDDLEKLEALECSNNEKLEPGSDVEVKDAELDKEGASKVKKYR 1310 1320 1330 1340 1350 1360 330 340 350 360 370 380 mKIAA1 KLLLEQAKPTNLELVPEEPSEPAPPLVVDHERLQKLLDLLVDKSNNLTVDQLERLYSLLS ::.::::: :.:::::::::::.:::.::.:::.:::::::::::::.:::::::::::: gi|126 KLILEQAKTTSLELVPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYSLLS 1370 1380 1390 1400 1410 1420 390 400 410 mKIAA1 QSIYRHRKDYDKSQLVEEMERTVHMFETFL : :::::::::::::::::::::::::::: gi|126 QCIYRHRKDYDKSQLVEEMERTVHMFETFL 1430 1440 1450 419 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 08:56:25 2009 done: Fri Mar 13 09:03:00 2009 Total Scan time: 894.130 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]